Search Results for "data analysis" - Page 28
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Showing 2195 open source projects for "data analysis"
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This is not really a "final" dataset. While the analysis has to come as a secondary priority to other responsibilities, this data set can serve at least 2 purposes: 1) Provide an experimental public lab notebook / log for an on-going experiment 2) After a few processed data sets have been added, provide an intermediate citation In the meantime, the best citation to use is probably the GitHub acknowledgements: https://github.com/cwarden45/RNAseq_templates/blob/master/TopHat_Workflow/README.md
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Statistical Rethinking 2023
Statistical Rethinking Course for Jan-Mar 2023
...It continues to provide scripts for lectures and tutorials, while integrating refinements to examples, notation, and computational workflows introduced that year. Compared with 2022, some models are rewritten for clarity, and teaching materials reflect refinements in McElreath’s evolving presentation of Bayesian data analysis. Students following the 2023 lecture videos use this repository as their coding reference. There are 10 weeks of instruction. Links to lecture recordings will appear in this table. Weekly problem sets are assigned on Fridays and due the next Friday, when we discuss the solutions in the weekly online meeting. -
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Gait Tracking With x-IMU
Foot tracking algorithm demonstrated in Seb Madgwick's 3D Tracking
...The method performs dead reckoning to integrate foot motion and corrects for drift at each foot strike (when the foot touches the ground) to reset error accumulation. The algorithm was part of gait analysis research, estimating foot trajectories in 3D over time. The repo is marked “no longer maintained,” and has been superseded by newer versions of Gait-Tracking. Capability to compare walking trajectories in experiments. Integration of IMU data (accelerometer + gyroscope). -
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123VCF
An Intuitive and Efficient Tool for VCF file filtration
123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC Bioinformatics 25, 68 (2024). https://doi.org/10.1186/s12859-024-05661-5 _____________________________________ Authors: Milad Eidi, Samaneh Abdolalizadeh, Soheila Moeini Supervisors: Javad Zahiri, PhD - Masoud Garshasbi, PhD Department of Neuroscience, University of California San Diego, California, USA Department of Medical Genetics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran -
Train ML Models With SQL You Already KnowBuild and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.
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Complete Machine Learning Package
A comprehensive machine learning repository containing 30+ notebooks
Complete Machine Learning Package repository is a comprehensive educational collection of machine learning notebooks designed to teach core data science and AI concepts through practical coding examples. The project includes more than thirty notebooks that cover a wide range of topics including data analysis, statistical modeling, neural networks, and deep learning. Each notebook introduces theoretical ideas and then demonstrates how to implement them using Python libraries commonly used in data science, such as NumPy, pandas, scikit-learn, and TensorFlow. ... -
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YUView
The Free and Open Source Cross Platform YUV Viewer
YUView is a cross-platform multimedia analysis tool focused on inspecting raw video formats, particularly YUV data, with advanced visualization capabilities. Built using Qt, it provides a powerful interface for viewing, comparing, and analyzing video frames at a detailed level. The software supports a wide variety of YUV formats, RGB images, and raw bitstreams, including direct decoding of HEVC and other modern codecs. -
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iGPS
An interactive tool for GNSS position time series analysis
* Please check latest update on https://github.com/igps-ftk/iGPS A tool written in Interactive Data Language (IDL), for processing and analyzing daily continuous GPS position time series. It can read time series in various formats, detect outliers, remove abnormal observation spans, find jumps, extract common-mode components(CMC), etc. -
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Kanaries RATH
Next generation of automated data exploratory analysis visualization
RATH is not just an open-source alternative to Data Analysis and Visualization tools such as Tableau, but it automates your Exploratory Data Analysis workflow with an Augmented Analytic engine by discovering patterns, insights, causals and presents those insights with powerful auto-generated multi-dimensional data visualization. -
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fastquant
Backtest and optimize your ML trading strategies with only 3 lines
fastquant is a Python library designed to simplify quantitative financial analysis and algorithmic trading strategy development. The project focuses on making backtesting accessible by providing a high-level interface that allows users to test investment strategies with only a few lines of code. It integrates historical market data sources and trading frameworks so that users can quickly build experiments without constructing complex data pipelines. -
Go from Code to Production URL in SecondsSkip the Kubernetes configs. Cloud Run handles HTTPS, scaling, and infrastructure automatically. Two million requests free per month.
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nodejsscan
nodejsscan is a static security code scanner for Node.js applications
Static security code scanner (SAST) for Node.js applications powered by libsast and semgrep. nodejsscan is a static security code scanner for Node.js applications. -
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Python Laboratory Operations Toolkit
many useful snippets for using python in a laboratory
A toolkit of Python software useful in a laboratory data acquisition and analysis environment. Includes support for such protocols as VXI-11 (and its extension, LXI), Vernier LabPro (now very old), and National Instruments DSTP (now very old). Also includes data analysis and modelling tidbits. Python3 updates are on the way in the very near future for the biggest packages. the vxi11 package is fully up-to-date, although see the blog post about python 3.13 -
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xTuring
Easily build, customize and control your own LLMs
xTuring is an open-source AI personalization software. xTuring makes it easy to build and control LLMs by providing a simple interface to personalize LLMs to your own data and application. xTuring provides fast, efficient and simple fine-tuning of LLMs, such as LLaMA, GPT-J, Galactica, and more. By providing an easy-to-use interface for fine-tuning LLMs to your own data and application, xTuring makes it simple to build, customize and control LLMs. The entire process can be done inside your... -
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QuantResearch
Quantitative analysis, strategies and backtests
...Many notebooks demonstrate backtesting pipelines that allow users to evaluate trading strategies using historical market data. The project integrates machine learning methods with traditional quantitative finance models, illustrating how statistical techniques can be applied to asset management and trading. -
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ViReMa
Viral Recombination Mapper
...Feb 2014 - Our paper (Open Access) is available at Nucleic Acids Research: "Discovery of functional genomic motifs in viruses with ViReMa–a Virus Recombination Mapper–for analysis of next-generation sequencing data" http://nar.oxfordjournals.org/content/42/2/e11 This is an on-going project and updates will be regularly posted. Please get in touch with any questions, problems or suggestions. -
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Capacity Planning & Management Software
Free & Open Capacity Planning Software in a Complete Virtual Machine
Every Profession has some sort of Resource to manage, be it materials, money, physical or logical resources & with it some vital queries to be answered: At what Rate is my Resource getting consumed? How Long will current stock last? What will be near future requirement? In Just Two Simple steps of Defining Your Resource & Actively Tracking its Consumption, you will be in total control of your Resource, with this Software. After starting this VM, from any PC on your Local Network,... -
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Selefra
The open-source policy-as-code software that provides analysis
Selefra is an open-source policy-as-code and infrastructure analysis tool that helps engineering and security teams gain visibility into complex multi-cloud and SaaS environments by treating infrastructure data as queryable information. The core idea behind Selefra is “select * from infrastructure,” meaning you can write flexible SQL-style queries against cloud configuration and inventory data assembled from dozens of services such as AWS, Azure, GCP, Kubernetes, GitHub, Slack, and more, bringing auditing, security, compliance, cost optimization, and architecture insights into one place. ... -
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PANDORA
Revolutionizing Biomedical Research with Advanced Machine Learning
...Join us and make SIMON even cooler! Exploratory analysis of machine learning results with the help of many different visualization techniques will give you instant insights into models and data. -
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NBi
NBi is a testing framework (add-on to NUnit)
NBi is a testing framework (add-on to NUnit) for Business Intelligence. It supports most of the relational databases (SQL server, MySQL, postgreSQL ...) and OLAP platforms (Analysis Services, Mondrian ...) but also ETL and reporting components (Microsoft technologies). The main goal of this framework is to let users create tests with a declarative approach based on an Xml syntax. By the means of NBi, you don't need to develop C# code to specify your tests! Either, you don't need Visual... -
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SocialPwned
OSINT tool to collect emails from social networks and find leaks
...Once emails are discovered, SocialPwned searches for leaked credentials using breach databases like PwnDB and Dehashed to determine whether those accounts have appeared in data leaks. SocialPwned also integrates with GHunt to retrieve additional public information related to Google accounts linked to the discovered emails. By combining social media intelligence with breach data analysis, SocialPwned helps investigators identify reused passwords and patterns that may indicate potential security weaknesses. -
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funNLP
Resources, corpora, and tools for Chinese natural language processing
...Its value lies in providing not just tools but also curated, domain-specific data, which can be hard to find elsewhere. -
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WTE
Forensic Windows Triage Environment
* Files are compressed and ENCRYPTED so are identified as "Malware" by Sourceforge. Criminal Investigators auxiliary in conducting investigations on computer systems. WTE is an easy to use, integrated forensic system that enables an investigator to safely image, preview and analyze internal hard drives (DeadBox), and also to conduct live forensics (LiveBox) or data recovery, using their tool(s) of choice. Safely and Easily Search and Triage with no need to disassemble computers or... -
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TXM
Unicode XML TEI text analysis platform
TXM is a free and open-source cross-platform Unicode & XML based text analysis environment and graphical client, supporting Windows, Linux and Mac OS X. It can also be used online as a J2EE standard compliant web portal (GWT based) with access control built in. DOWNLOAD LATEST VERSION OF TXM : http://textometrie.ens-lyon.fr/spip.php?rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP... -
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Python Data Science Handbook
Python Data Science Handbook: full text in Jupyter Notebooks
...Each chapter is a standalone Jupyter notebook, with runnable code, explanatory prose, visuals, and examples showing how to handle data-wrangling, exploratory data analysis, machine learning workflows, and visualization. The repository is freely available and the code is released under the MIT license; the textual content is released under a Creative Commons license. Users can also launch the notebooks in Google Colab or Binder directly, making it extremely accessible. -
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PromethAI
Open-source framework that gives you AI Agents
PromethAI-Backend is a backend framework for AI-driven automation and knowledge extraction. It is designed to integrate with large language models (LLMs) to provide AI-enhanced workflows, including content generation, summarization, and data analysis. -
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scArches
Reference mapping for single-cell genomics
Single-cell architecture surgery (scArches) is a package for reference-based analysis of single-cell data. scArches allows your single-cell query data to be analyzed by integrating it into a reference atlas. By mapping your data into an integrated reference you can transfer cell-type annotation from reference to query, identify disease states by mapping to healthy atlas, and advanced applications such as imputing missing data modalities or spatial locations.