Search Results for "plant"
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Showing 97 open source projects for "plant"
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OpenPlanter
Language-model investigation agent with a terminal UI
...With its modular Python codebase, users can adapt the platform for different plant types, hardware setups, or automation strategies. Overall, OpenPlanter aims to simplify the creation of programmable, data-driven plant care systems. -
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electricityMap
A real-time visualisation of the CO2 emissions of electricity
Real-time visualization of the Greenhouse Gas (in terms of CO2 equivalent) footprint of electricity consumption built with d3.js and mapbox GL. Real-time data is defined as a data source with an hourly (or better) frequency, delayed by less than 2hrs. It should provide a breakdown by generation type. Often fossil fuel generation (coal/gas/oil) is combined under a single heading like 'thermal' or 'conventional', this is not a problem. Citizens should not be responsible for the emissions... -
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The Powder Toy
Sandbox video game with a powerful physics engine
Have you ever wanted to blow something up? Or maybe you always dreamt of operating an atomic power plant? Do you have a will to develop your own CPU? The Powder Toy lets you to do all of these, and even more! The Powder Toy is a free physics sandbox game, which simulates air pressure and velocity, heat, gravity and a countless number of interactions between different substances! The game provides you with various building materials, liquids, gases and electronic components which can be used to construct complex machines, guns, bombs, realistic terrains and almost anything else. ... -
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Sandspiel
Creative cellular automata browser game
Sandspiel is an interactive, browser-based cellular automata simulation game that allows users to experiment with physics-like behaviors using simple elements such as sand, water, fire, and plant matter. Built with Rust compiled to WebAssembly and rendered using WebGL, it achieves high-performance simulation directly in the browser without requiring installation. The project focuses on creative exploration, enabling users to draw elements onto a canvas and observe emergent behaviors as they interact in real time. Its simulation engine models particle dynamics and fluid interactions, creating visually engaging and often unpredictable outcomes that mimic natural processes. ... -
Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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GrowMe
display charts and datas from plant grows
display charts and datas from plant grows , no server , only javascript inside browser . used tools D3.min.js and XLXS.core.min.js -
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TOPCEE
Python GUI tool for estimating plant CAPEX, OPEX, and profitability
...The app calculates capital and operational expenditures (CAPEX & OPEX) and provides key profitability metrics such as: **ROI (Return on Investment) **IRR (Internal Rate of Return) **NPV (Net Present Value) **Payback Period (Discounted and Non-Discounted) **Benefit-Cost Ratios Users input plant-specific values like feedstock costs, operating time, product price, and equipment cost — and the tool generates real-time visualizations and results. TOPCEE is ideal for feasibility studies, academic research, and early-stage techno-economic evaluations. -
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Biosphere3D
Interactive landscape rendering based on a virtual globe.
Biosphere3D targets interactive landscape rendering based on a virtual globe. It supports DEM, satellite and aerial images, 3D models (Collada), 3D plant models, and Shapefiles. Biosphere3D was initially developed by the landscape visualization group of the Zuse Institute Berlin by Malte Clasen and is now developed further by Lenné3D GmbH. For more information about the used concepts have a look at the thesis of Malte Clasen: Towards Interactive Landscape Visualization Doctoral Thesis published 2011 via Technische Universität Berlin https://doi.org/10.14279/depositonce-3005 -
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Kuwaiba Open Network Inventory and CMDB
Enterprise grade network inventory system and CMDB for telecom and IT
Kuwaiba is an enterprise grade network inventory system and CMDB for telecommunications and IT infrastructure. Some use cases can be seen here: * General Overview / Broadcast Radio & TV https://passionateaboutoss.com/oss-sandpit-resource-inventory-module/ * Modeling a 5G network in Kuwaiba https://passionateaboutoss.com/oss-sandpit-5g-network-inventory-prototype/ * Passive Optical Networks http://passionateaboutoss.com/oss-sandpit-gpon-network-inventory-prototype/ * IoT and Smart... -
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PLEKv2
PLEKv2: predicting lncRNAs and mRNAs
...decompress Coding_Net_kmer6_orf_Arabidopsis.h5.bz2 model $ bunzip2 Coding_Net_kmer6_orf_Arabidopsis.h5.bz2 USAGE Python PLEK2.py -i fasta_file -m model(ve: vertebrate , pl: plant) Examples: $ python PLEK2.py -i test.fasta -m ve Aimin Li, Haotian Zhou, Siqi Xiong, Junhuai Li, Saurav Mallik, Rong Fei, Yajun Liu, Hongfang Zhou, Xiaofan Wang, Xinhong Hei, Lei Wang. PLEKv2: predicting lncRNAs and mRNAs based on intrinsic sequence features and the coding-net model. BMC Genomics 2024, 25(1):756. https://doi.org/10.1186/s12864-024-10662-y -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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miRDeep*
MiRDeep*
...We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
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MicroRNAs (miRNAs) are of significance in tuning and buffering gene expression. Despite abundant analysis tools have been developed in the last two decades, plant miRNA identification from next-generation sequencing (NGS) data remains challenging. Here present a user-friendly pure Java-based software package, SRICATs, which enable researchers to perform all steps of plant miRNA analysis based on convolutional neural network methods. SRICATs outperforms currently popular software tools on the test data from five plant species: Oryza sativa, Arabidopsis thaliana, Sorghum bicolor, Chlamydomonas reinhardtii and Physcomitrella patens.
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Kitchen Garden Aid 2
Plan out your kitchen garden
An easy to use application to design your kitchen garden or your house farm. Helps you plan your plants ( vegetables, fruit trees, herbs, flowers ) so that it respects the rules of crop rotation and companion planting. Based on square foot gardening. A fork of https://sourceforge.net/projects/kitchengarden. The windows installer contains all necessary files. A Linux and Mac package contains scripts and instructions to install the dependencies, and run KGA. If you download the jar... -
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QOR
Libraries written in Go abstracting features needed for business apps
...QOR is comprised of modules that abstract common features for such systems, such as a configurable and flexible back office, a content publishing system, a media library, and much more. We built QOR at The Plant to accelerate development for our clients, it is at the core of our engineering strategy, and we maintain it on an ongoing basis. This is a complete rewrite of the original QOR, which was a proprietary framework written in Ruby on Rails. QOR 1.0 is the first version to be open sourced and distributed under the MIT license. QOR is built by engineers, for engineers. ... -
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CliMA Land
Everything within the Land model
CliMA Land is a next generation Land Surface Model (LSM) designed to use the broadly available remote sensing data as well as ground-based flux measurements. CliMA Land is a highly modular platform to promote research at different scales from tissue to organ, whole plant, and ecosystem. Therefore, we deliver CliMA Land via a patch of packages (also referred to as sub-modules) to reduce the time used to initialize a research project. As a result, the repository is more a collection of tutorials and examples for users, rather than a place to store the code for all sub-modules. This project is supposed to be a community effort, leveraging all the work that has been done in Land Surface Modeling from various groups around the world. ... -
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UIBM (= Universal Individual-Based Model) is an agent-based simulation/3d-dvisualization of the dynamics within multispecies plant communities of Northwest Europe, parameterized from databases using universal scaling laws.
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sRNAWorkbench
The UEA sRNA Workbench
A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data -
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miRDP2
Accurately and fast analyzing microRNAs transcriptome in plants
...We have tested miRDP2 to analyze miRNA transcriptomes in such plants with gradually increased genome size as Arabidopsis, rice, tomato, maize and wheat. Compared with miRDeep-P and several other computational tools, miRDP2 processed NGS data with superior speed. By incorporating newly updated plant miRNA annotation criteria, the accuracy of miRDP2 is also markedly improved. Our results demonstrate miRDP2 as a fast and accurate tool for analyzing the miRNA transcriptome in plants. Reference: https://doi.org/10.1093/bioinformatics/bty972 -
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IMMpractical implements various Markov chain model-based methods for analysis of DNA sequences. Please cite: Sparks, M.E., Brendel, V. and Dorman, K.S. (2007) Markov model variants for appraisal of coding potential in plant DNA. LNBI. 4463:394-405.
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GROWbox Supervisor System (GROWSS)
Automated Plant Environment Growing System using Raspberry Pi
GROWbox Supervisor System (GROWSS) is a grow box or grow cabinet environmental controller. GROWSS uses a Raspberry Pi (RPI) & Grove sensors to monitor and control the environment in your grow box or cabinet. Environmental factors such as temperature, humidity, soil moisture, & smoke (from fire) are monitored and displayed on a terminal connected to the RPI & on a mobile app. GROWSS also controls the exhaust fan and grow lights based on the time interval (ie. 12 hours on/12 hours off) &... -
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Jack LIRE (Linked Record)
Quantum universal object system with referencing and genetics
Jack LIRE (Linked Record) is a quantum database-backed life-long text record diary with referencing (linking) between records, and a data library for life-long keeping of files such as documents, photographs, music and more. The diary records are fully searchable. Files can be mentioned in diary records to preserve memories, document knowledge and ideas, and more. Massive numbers of diary records and files can be permanently kept. A database located on one computer can be accessed from... -
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Phenalysis
Analyze agronomic plant research plots in aerial orthomosaic images.
...Please cite the following reference in your work if you use Phenalysis: Khan Z and Miklavcic SJ (2019) An Automatic Field Plot Extraction Method From Aerial Orthomosaic Images. Front. Plant Sci. 10:683. doi: https://doi.org/10.3389/fpls.2019.00683 This tool is being developed through the sponsorship of the Australian Research Council's Industrial Transformation Research Hub on Wheat in a Hot and Dry Climate. https://www.wheathub.com.au/ -
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Plant app
A ruby-activeRecord-MySQL application which stores data about plants
...Code should work on 2.0.0 ruby version though modern versions should be supported too. (Up to 2.4.6) Also, database supposed to have Hungarian information hence application supports UTF-8. The dummy plant is also written in Hungarian text. -
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RTC-simulator
Simulation and Control of Processing Plants
...The simulations include a number of the techniques described in Applied Process Control – Essential Methods, and that book’s accompanying volume, Applied Process Control – Efficient Problem Solving. Actually, RTC is not merely a suite of simulations: Each application can be switched from “MODEL” to “PLANT” mode for real-time control of equipment through a somewhat basic interfacing arrangement. In “MODEL” mode, time can be accelerated or frozen.
