Search Results for "mirdp"

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Showing 2 open source projects for "mirdp"

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1

miRDP2

Accurately and fast analyzing microRNAs transcriptome in plants

miRDeep-P2 (miRDP2) is developed to accurately and fast analyze microRNAs (miRNAs) transcriptome in plants. It is adopted from miRDeep-P (miRDP) with new strategies and overhauled algorithm. We have tested miRDP2 to analyze miRNA transcriptomes in such plants with gradually increased genome size as Arabidopsis, rice, tomato, maize and wheat. Compared with miRDeep-P and several other computational tools, miRDP2 processed NGS data with superior speed. By incorporating newly updated plant miRNA annotation criteria, the accuracy of miRDP2 is also markedly improved. ...

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Downloads: 15 This Week

Last Update: 2021-09-18
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2

miRDeep-P

miRDeep-P,miRDP for short, is a computational tool for analyzing the microRNA (miRNA) transcriptome in plants.

Downloads: 0 This Week

Last Update: 2016-05-20
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