reg_stack
For registering stacks of 2D images.
reg_stack is an extension to the open source project, NiftyReg, for the coregistration of a series of 2D images representing a 3D block tissue subjected to histological serial sectioning. The software performs a series of nonlinear image transformations across a kernel of user-specified size to restore data continuity, as the sectioning process results in misalignments and distortions.
The NiftyReg package also includes optimizations for parallelization on either the CPU or GPU...