Search Results for "structure" - Page 72
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Showing 2917 open source projects for "structure"
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A collection of scalable icons for use on toolbar/ribbon buttons and similar user interface elements.
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level. -
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DEB Wizard
Shell script to create debian packages easily with graphical interface
Needs zenity installed to run. You can make your .deb packages from extracted file. It build automatically the necessary files and structure. -
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BiomeNet
BAYESIAN INFERENCE OF METABOLIC DIVERGENCE AMONG MICROBIAL COMMUNITIES
...Here, we describe a novel hierarchical Bayesian model, called BiomeNet (Bayesian inference of metabolic networks), for inferring differential prevalence of metabolic networks among microbial communities. To infer the structure of community-level metabolic interactions, BiomeNet applies a mixed-membership modelling framework to enzyme abundance information. The basic idea is that the mixture components of the model (metabolic reactions, subnetworks, and networks) are shared across all groups (microbiome samples), but the mixture proportions vary from group to group. ... -
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NanoCap
Carbon Fullerene and Capped Nanotube Generator
...The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code. -
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BoneSlicer
Experimental G-Code-Generator for variable density infill in FFF parts
BoneSlicer is an experimental G-Code-Generator written in Java that allows creating load-adapted infill for 3D printed (FFF) parts, inspired by the adaptive structures of trabecular bone tissue. It uses a simple structural Finite Element Analysis to determine the distribution of mechanical stress within the part and offers tools to generate an infill structure consisting of multiple subareas of varying infill density. Subdivision of the infill area can be based on a broad spectrum of FEA result parameters. BoneSlicer relies on the Open Source software GMesh and Calculix for meshing and FEA analysis. So far only 2D FEA and only cross hatch infill is supported. -
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Directory Structure To Json
Folder Structure >>> JSON File
Just select any folder from your computer and save equivalent JSON file. -
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musicinformationretrieval.com
Instructional notebooks on music information retrieval
musicinformationretrieval.com is a collection of instructional materials for music information retrieval (MIR). These materials contain a mix of casual conversation, technical discussion, and Python code. These pages, including the one you're reading, are authored using Colab notebooks. -
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SFrame is a C++ framework built around the ROOT libraries for analysing particle physics data. It gives a very high performance for processing data, by allowing the user to run his/her code on a distributed farm of machines.
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Cut Data Warehouse Costs by 54%BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
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Responsive HTML Email Template
Responsive HTML email template designed to work on all email platforms
...It serves as a foundation that has been tested and thoroughly reviewed for compatibility, making it very easy to customize and make changes. Using MailChimp's html email template (blue-print) as the foundation, this template is an improved version with more row options, redefined structure, and many fixes for Outlook, Yahoo, Hotmail, Gmail, e.t.c. -
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Data Structure
Java Api to manipulate simple on data of Hierarchical Type
Java Api to manipulate simple on data of Hierarchical Type. There is lot of usefull methods like addChild , getChild , getData , removeChild , parse xml and lot more. -
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adLIMS
adLIMS: a Laboratory Information Management System with ADempiere
...We process around 1500 samples/year resulting in hundreds of millions of sequencing reads, requiring automation and posing new challenges in data storage, monitoring of sample process and computational tools for analyses. Thus we need to standardize data management and tracking systems, built on a scalable, flexible structure with an easily accessible and web based interface, what is usually called Laboratory Information Management System (LIMS). -
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ReArch Database Project
Code Repository for the Recursive Relational Archaeological DBMS
The Recursive Relational Archaeological Database (ReArch) is a data management platform that preserves the practical configuration that data tables provide, while relaxing the strict, attribute-based model that so characterized modern databases. The schema consists of an inherently recursive and extensible structure that can incorporate heterogeneous observations and analyses into a common framework in order to evaluate their commensurability. In this manner, ReArch provides a simple platform for analyzing and formally expressing the chains of qualifications and associations that fundamentally characterize excavation contexts, artifact descriptions, geographical information, and the secondary and tertiary materials analyses derived from archaeological materials. ... -
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smi Android SDK Library
Android SMI SDK for SNMP agent/manager or MIB browser
Android version of SMI(Structure of Management Information) based on existing C libsmi project at https://www.ibr.cs.tu-bs.de/projects/libsmi/index.html?lang=de The SDK uses Android NDK tool to wrap existing C libsmi library into Android platforms library. An example Android project has also been created to show how to use the libsmisdkjni.so in your project. -
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Wordpress EU Cookie Script / Plugin
An easy to install wordpress plugin for complying to the eu cookie law
...Our plugin makes use of implied consent like the UK Government and Youtube. =================== === Installation === 1. Upload the folder `rankguard` to the `/wp-content/plugins/` directory keeping the current file structure. 2. Activate the plugin through the 'Plugins' menu in WordPress Plugin Dashboard. Frequently Asked Questions How can I test that the plugin works? 1. Install the plugin following the steps above. 1. Go to your Wordpress website and it will display on all pages until accepting cookies. 2. Once accepted the user will no longer see the bar until they clear their cookies. ... -
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ViralNet is an open-source software package for inferring the Clonal Structure of Viral Populations from Time Series Sequencing. The program aims to characterize and quantify the composition, the abundance and the evolutionary history of the underlying viral population within a given host by analyzing Next Generation Sequencing data. ViralNet takes as input the collection of reads (or several collections of reads in case of many data samples or daily data) and the reference genome and it constructs the evolutionary network exhibiting the species abundance profile and the list of haplotypes along with their prevalence.
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SABLE is a public domain package for structural bioinformatics that can be used to predict from amino acid sequence secondary structure and solvent accessibility profiles in proteins (see Adamczak, Porollo and Meller, Proteins 56, 2004).
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ezTest
A unit test framework for standalone C++, Python or Console programs.
...A Python suite manager also allows coordination of any combination of the C++/Python/Console tests to be invoked from a single driver. Reports test number, name and duration in optional tty colors. Supports custom test order to logically structure test execution from simple cases to most complex. The command line interface also allows selective test cases to be run to focus on and isolate failures. Only an import (Python) or include (C++) is needed to use ezTest. -
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cosd_java
A Tool for Searching and Demonstrating Code Structure
CoSD is a tool for searching and demonstrating code structure based on graph database. Since some commercial code is involved in the industrial version of CoSD , we just give out a baseline version of it. We also provide a quick demo for this baseline version. To use CoSD, please read the file readme.txt at first. -
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LARS (Lightning Assessment of Risk for a Structure). LARS is a simple tool for the lightning assessment of risk for a structure, according to standard IEC 62305-2, second edition.
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XanLib is a Linux library which provides data structures like hash tables, lists, pipes etc.. Each data structure exposes both synchronized and not synchronized methods.
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Curriculum Manager
Currman is a Curriculum Manager
Currman provides tools for managing a curriculum. It stores a representation of a curriculum including course information (name, description, credits, pre-requisites, etc). It also stores a curriculum structure for particular degree programs (required courses, electives, concentrations, etc) Currman provides features for faculty and administrators who instruct and advise students in a degree program. Currman provides features for students to help them understand the degree, and track their progress through the program. -
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A Scalable Multicore Code for RNA Secondary Structure Prediction
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...Basically each scenario consists of a database Production (BDP) large volume that simulates a real environment and a database of Experiments (BDE) that contains information about SQL, Mutants and results of experiments with random instruction methods. The reference value is nothing more than a set of data bases. The first scenario has the structure and the generated data for the specific benchmark, the second is its structure and data obtained from an actual application.
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Is My Download Broken?
a powerful multipurpose checksum utility
It's a cross platform utility designed for performing various checksumming activities. It supports verity of standards including ADLER-32, CRC-32, MD2, MD5, MURMUR-32, MURMUR-128, SHA-1, SHA-256, SHA-384, SHA-512 and SIPHASH24. Also generated results can be validated within the application. Results can be saved to a text file format. It can batch process folders as well. This tool requires Java Run-time Environment 7 or higher to use.
