Showing 2417 open source projects for "python tools"

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  • 1

    iMir

    Integrated pipeline for HT miRNA-Seq data analysis

    Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular...
    Downloads: 14 This Week
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  • 2
    Ultimate Server OS

    Ultimate Server OS

    Need a Pre-Configured Linux Distro for Servers? Try Ultimate Server OS

    This OpenSuse variant comes pre-configured with many softwares to help you build the best server you can! They include: ---Browsing--- Chromium Firefox ---Servers--- iceCAST LAMP Mumble/Murmur Server Samba Cron ...and more ---Extras--- GIMP Python Transmission VLC Wine With these tools, you can run many different kinds of servers, with the ability to add more softwares as well. Built on the solid foundation of OpenSuse, which is powerful yet lightweight, this OS will not only speed up your PC, but re-invent it! ___________________________________________ System Requirements ___________________________________________ - Pentium 4 2.4 GHz or better - Intel or AMD 64 Bit (VERY recommended) - 1GB of RAM - 2GB (HIGHLY recommended for good server performance...
    Downloads: 1 This Week
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  • 3
    OVNI

    OVNI

    Open Virtualization Nodes Infrastructure

    OVNI is, first of all, an AJAX web-application to create and manage Virtual Machines on KVM nodes. it's developed under WaveMaker and rely on Libvirt to be compatible with other tools such as virsh. In the future, the project aims to provide a complete virtualization environment.
    Downloads: 1 This Week
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  • 4
    mpvscada

    mpvscada

    Another HMI/SCADA set of tools written in C++(Qt) with python bindings

    HMI/SCADA software. Support Linux, Windows (cross operation) Source library for writing own control applications with Qt in C++/Python.
    Downloads: 0 This Week
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    JavaMacBuntu

    JavaMacBuntu

    Plug and play linux OS with macintosh design

    Javamacbuntu is a much many feature of linux based on 10.10 maverick meerkat. This operating sytem its plug and play linux OS with macintosh design where we can boot without installing this operating system. Remember, its totally FREE Download Link Here : http://content.wuala.com/contents/javanesse/javamacbuntu/JVMB-i686rev1.3.iso?dl=1 If You want to donate me, here my donating page http://www.supportunicef.org/site/c.dvKUI9OWInJ6H/b.7549291/k.BDF0/Home.htm
    Downloads: 0 This Week
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  • 6

    openSEQ

    NGS compute distro proloaded with pipeline analysis software

    ...Software included (location - name): path - biobambam path - bwa path - bowtie2 path - bowtie path - cufflinks path - bcftools path - tophat path - scalpel path - samtools path - sra-toolkit path - bamtools path - delly path - delly-parallel path - picard-tools path - fastahack path - twoBitToFa ~/prog/java/ - mutect ~/prog/python/ - platypus ~/prog/java/ - gatk
    Downloads: 0 This Week
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  • 7
    X-Dev Linux 1.0

    X-Dev Linux 1.0

    An elegant Ubuntu based Linux distribution for all programmers.

    ...X-Dev Linux has all necessary programms, IDE's preinstalled for programmers to deal with daily tasks without having to look for additional software programs. When you need more applications, IDE's or tools, you can install them through Ubuntu Software Center. X-Dev is developed by considering the requirements of programmers that they face in there daily work. X-Dev is suitable for all type of programmers ranging from web developers,web designers, java programmers ,kernel developers, .NETapplication developers, and also python and ruby developers. ...
    Downloads: 0 This Week
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  • 8
    RoboComp
    RoboComp is a robotics framework providing a set of open-source, distributed, real-time robotic and artificial vision software components and the necessary tools to create and manage them.
    Downloads: 0 This Week
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  • 9

    Aqualid

    General purpose build system

    General purpose build tool. Key features: Flexible and scalable for large projects Dynamic dependency graph Batch build support Distributed build scripts (no fixed project structure) Support any build target types (files, strings, URLs, remote resources etc.) Conditional options Scons like build scripts (but don't compatible)
    Downloads: 0 This Week
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  • 10
    DR14 T.meter

    DR14 T.meter

    Compute the DR14 of a given audio file according to the procedure desc

    Introduction to DR14 T.meter DR14 T.meter is a free and opens source command line tool for computing the Dynamic Range of your music according to the procedure used in the off-line meter released by the Pleasurize Music Foundation. This tool is very useful to measure how is loud your music and for understanding that a good quality album always has also a good dynamic, and it's also useful for understanding the effects of the so called loudness war. Dr14 t.meter is released under the...
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    Downloads: 16 This Week
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  • 11
    AMPPS

    AMPPS

    AMPPS is a LAMP/MAMP/WAMP stack

    AMPPS is a stack of Apache, MySQL, PHP, Perl & Python. AMPPS enables you to focus more on using applications rather than maintaining them. With AMPPS you can create a website by installing any of the 330+ Apps, customizing it, and then simply publishing it on the internet via a wide choice of hosting service providers. A complete package on your desktop, same like the server that provides many open source web applications. Application Management, Domain management, Database management, etc...
    Downloads: 13 This Week
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  • 12

    LittleDarwin

    Mutation Analysis Framework for Java

    Mutation testing has been proven to be a reliable method to estimate the quality of a test suite. Most of current mutation tools require the architecture of their target system to be in a certain way in order to apply the technique; thus making it impossible to use them in complex build environments. LittleDarwin is a mutation testing tool designed primarily with the premise of easy deployment in complex systems; in order to provide mutation testing where other tools fail.
    Downloads: 0 This Week
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  • 13
    Cyclone - Task Automation

    Cyclone - Task Automation

    Task Scheduler for Java, Groovy, Javascript, python & ruby

    Cyclone is java-based rich GUI web tool for automating tasks with ease. Cyclone is a project that was borne out of necessity. Agreed, there are many native tools that allow task to be scheduled or automated on most operating systems, however, Cyclone is more than just an automation tool. In many programming languages, there are batch module/libraries available to schedule jobs, but need quite a bit of enhancements to provide similar feature set as Cyclone. Cyclone comes with a number of fascinating features Real-time progress and status montoring for jobs Pause, resume and stop an executing job Multi-user environment with in-built authentication and authorization modules Polygot - jobs can be implemented in java, groovy, ruby, javascript and python Easy administration and configuration - user management etc. ...
    Downloads: 3 This Week
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  • 14

    ant_farm

    Python-based reverse-engineering tool

    ant_farm provides a GUI framework for integrating all of those python tools you have written over the years to parse files, execute algorithms, display data etc.
    Downloads: 0 This Week
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  • 15
    Optimal BPM

    Optimal BPM

    The beat of your business

    [See the files section for installation instructions] Optimal BPM™ is a project that aims to create an easy-to-use Business Process Management system (BPM) and tools. So far, only the tools, and only a data replication tool, Optimal Sync, has been released (available from the "files" page). But more is coming. It incorporates many different open source projects that relates to interoperability, transformation, context and process control. It has no business engine, instead it generates Python code and leaves the engine mechanics to its scripting engine. ...
    Downloads: 1 This Week
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  • 16

    Aelius Brazilian Portuguese POS-Tagger

    Python, NLTK-based package for shallow parsing of Brazilian Portuguese

    Aelius is an ongoing open source project aiming at developing a suite of Python, NLTK-based modules and interfaces to external freely available tools for shallow parsing of Brazilian Portuguese. It also includes language resources such as language models, sample texts, and gold standards. Presently, Aelius already offers facilities for POS-tagging and chunking corpora and outputting annotations in different formats, such as in XML in the TEI P5 encoding scheme.
    Downloads: 42 This Week
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  • 17

    Larch: Data Analysis for X-ray Spectra

    Data Processing and Analysis for X-ray Spectroscopy and More

    Larch is a scientific data processing language that is designed to be easy to use for novices and complete enough for advanced data processing and analysis. Larch provides a wide range of functionality for dealing with arrays of scientific data, and basic tools to make it easy to use and organize complex data. Larch has been primarily developed for dealing with x-ray spectroscopic and scattering data, especially the kind of data collected at modern synchrotrons and x-ray sources. Larch is written in Python and relies heavily on the standard tools for scientific computing with Python (numpy, scipy, matplotlib, and h5py).
    Downloads: 1 This Week
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  • 18
    Pathomx

    Pathomx

    Workflow-based data analysis built on IPython

    Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.
    Downloads: 1 This Week
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  • 19

    Penetration-Testing-Toolkit v1.0

    A web interface for various penetration testing tools

    Penetration-Testing-Toolkit is a web based project to automate Scanning a network,Exploring CMS, Generating Undectable metasploit payload, DNS-Queries, IP related informations, Information Gathering, Domain related info etc
    Downloads: 0 This Week
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  • 20

    VoNDA

    Visualization of Network DAta

    This tools allows for visualization of heterogeneous data sets on SVG network maps
    Downloads: 1 This Week
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  • 21

    tags2uml

    Generates UML class diagrams, from source code

    Generates UML class diagrams, from source code. Please see GitHub page for more info. Command line tool to convert from a Exuberant-ctags tags file to a UML class diagram, through Graphviz, for all object oriented languages supported by ctags The input file is a tags file, generated by Exuberant-ctags using --fields==+latinK. The output file is a Graphviz DOT file whose name is specified through the program options, or to stdout. The DOT file should then be passed to the Graphviz...
    Downloads: 0 This Week
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  • 22

    NGSbinningpytools

    Python tools for binning NGS scaffolds to various genomes.

    Next generation sequencing has opened new avenues for sequencing prokaryotes which were difficult or either impossible to culture. Now, it is possible to sequence all organisms present in a metagenomic community. However, a critical problem is to determine the host organism for each genomic fragment present in the dataset. This project provides the computational tools for assigning the organismal identity for each genomic scaffold in the given dataset. For more detailed documentation...
    Downloads: 0 This Week
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  • 23
    PyQue is a set of libraries and tools which help in developing roquelike games in Python programming language.
    Downloads: 0 This Week
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  • 24
    precise-elementary

    precise-elementary

    simple, beautiful, fast, friendly, fun, and all around amazing Linux

    Based on the next generation of elementary OS. Lightweight and beautiful. All-new apps. A refined look. elementary is a team of dedicated developers, artists, and your everyday users who want to craft an incredible computing experience. We make elementary OS and many apps and give them to users to help bring this goal to reality. elementary is a software platform; a unified computer operating system. We have a commitment to a particular toolkit (GTK+) and support a preferred programming...
    Downloads: 1 This Week
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  • 25

    pyhome

    Python scripts we use to organize our family business

    pyhome consists of three command-line tools: 1) a CRM (fancy word for address book) 2) a Kanban task manager 3) bank account summary
    Downloads: 0 This Week
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