Search Results for "python structural engineering" - Page 55
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Showing 2725 open source projects for "python structural engineering"
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statspy
Python module for statistics built on top of NumPy/SciPy
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srst
Short Read Sequence Typing
Update - SRST2 Now Available ------ 25 Sep, 2013 This project has now been replaced by SRST2 - Short Read Sequence Typing for Bacterial Pathogens, available at http://katholt.github.io/srst2/ The new SRST2 program does gene typing as well as MLST (e.g. typing resistance genes, virulence genes, etc). SRST2 is faster and more accurate than the old SRST, using bowtie2 to achieve local alignments (no need for flanking sequences) and a brand new scoring system. -
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BriCS
SaaS for running simulation models in the cloud
The Bristol Cloud Service simulation runner is a cloud computing Software as a Service designed to enable users to quickly launch simulation code on Amazon AWS' Elastic Compute Cloud (EC2). BRiCS is written in Python using the Django framework and interacts with EC2 using the boto API. BriCS enables multiple simulation runs to be launched in parallel from a web browser. Model configuration (parameters) files are uploaded via the browser and results files are downloadable on completion. ... -
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DeDAY
MLE survival analysis: Gompertz, Weibull, Logistic and mixed morality.
DeDAY (Demography Data Analyses) is a tool of analyzing demography data. It supports Gompertz, Weibull and Logistic distributions. DeDay also supports mixed mortality models based on these distribution such as the Gompertz-Makeham distribution. Distributions such as Gompertz describes only age-dependent mortality, which increases over time. Mixed mortality models, such as in Gompertz-Makeham distribution, consider a more general case where mortality is consist of both age-dependent and... -
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Donatus is an on-going project consisting of Python, NLTK-based tools and grammars for deep parsing and syntactical annotation of Brazilian Portuguese corpora. It includes a user-friendly graphical user interface for building syntactic parsers with the NLTK, providing some additional functionalities.
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Widget de Fecha
Widget para el inicio de los programas en Python, informa al usuari
Widget para el inicio de los programas, informa al usuario la fecha, la hora y los dias restantes del año. -
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A Python package with bindings to the "Virtual Instrument Software Architecture" VISA library, in order to control measurement devices and test equipment via GPIB, RS232, or USB. Note: Development of PyVisa moved to github https://github.com/hgrecco/pyvisa This page is of historical interest only!
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MSTParser
MSTParser is a non-projective dependency parser that searches for maxi
MSTParser is a non-projective dependency parser that searches for maximum spanning trees over directed graphs. Models of dependency structure are based on large-margin discriminative training methods. Projective parsing is also supported. mstparser 0.5.1 is now available via Maven Central. If you use Maven as your build tool, then you can add it as a dependency in your pom.xml file: <dependency> <groupId>net.sourceforge.mstparser</groupId> <artifactId>mstparser</artifactId> ... -
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RESPOND-R
RESPOND-R Test Instrument
The RESPOND-R framework is a modular, distributed data logging framework built for the purpose of studying Emergency Informatics as it relates to human robot performance during disaster responses. Tutorials can be found on the wiki: https://sourceforge.net/p/respondr/wiki/ -
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This is the former home of pyecm, which has now been moved to github: https://github.com/martingkelly/pyecm Pyecm factors large integers (up to 50 digits) using the Elliptic Curve Method (ECM), a fast factoring algorithm.
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LibreEngineering - suite of instrumentation, electrical, mechanical, process engineering calculation and design programs and other tools. Licensed under GPL3. Written in Python with Qt toolkit.
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Cerulean Hybrid Genome Assembler v0.1 Cerulean extends contigs assembled using short read datasets like Illumina paired-end reads using long reads like PacBio RS long reads. Cerulean v0.1 has been implemented with bacterial genomes in mind. I am not able to maintain and update the software due to change in research funding. However I will be happy to answer any queries or provide support and comments if you are interested in extending this algorithm. The method is fully described in...
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PolyCTLDesigner
Python scripts for designing polyepitope T-cell immunogens
Given the peptides (T-cell epitopes) PolyCTLDesigner selects flanking sequences to optimize TAP-binding and joins resulting oligopeptides into a polyepitope in a way providing efficient liberation of potential epitopes by proteasomal and/or immunoproteasomal processing and minimizing the number of junctional epitopes. For constructing polyepitopes PolyCTLDesigner utilizes known amino acid patterns of proteasome cleavage and TAP-binding specificity. PolyCTLDesigner is also able to choose... -
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JSolutions
The solution to all your problems
The Jsolution package is a collection of programs, scripts,libraries and documents that i have written and use in my daily life. -
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math toolkit
A C++ and Python library for finance, statistics and linear algebra.
A lightweight C++ and Python library for finance, statistics and linear algebra. Finance features include compound rate present/future value, annuity, various present/future value coefficients ... Statistics features include mean, median, variance, standard deviation, covariance, correlation, linear regression, probabilities and random variates of various distributions ... Linear algebra features include matrix arithmetic, inverse, determinant, rank, linear system solution, lu/qr... -
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lilyglyphs
Package to allow the use of notational elements in LaTeX documents
'lilyglyphs' allows authors of LaTeX documents to include notational elements of the excellent notation software LilyPond (http://www.lilypond.org) in their continuous text. Different from other approaches it is possible to use virtually anything that can be created with LilyPond. To use lilyglyphs it is not necessary to have LilyPond installed. But you will need it if you want to extend the predefined commands with your own. A working Python installation isn't necessary either, but allows... -
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Tuque
Tools for mapping RNA-Seq reads to eukaryotic genomes
Tuque includes 4 programs: tuqueIndex to prepare Bowtie indexes that include spliced sequences tuqueMap to map reads using the prepared indices tuqueSplice to find splice junctions from the reads tuqueCount to count the reads mapping within annotated sequence intervals -
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PyPak is a Python library for communication with Campbell Scientific dataloggers through the PakBus interface over TCP/IP or serial lines.
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Voice keyboard/dictation. Aims to be a total substitute for a keyboard. Spell out words letter by letter (using code: alpha, bravo, ..). Arrow keys, modifiers work. Speak whole words (but whole word accuracy is not good). Attach commands to some word
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Math tools in Python to tackle down problems in Operational Research fields. Comes with a Django based web interface to allow remote access to complex simulation means.
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CAPLET
GDS visualization and parallelized capacitance extraction
Project CAPLET is a capacitance extraction toolkit that extract capacitance at field-solver accuracy. CAPLET can directly handle GDS2 layout files into capacitance matrices in both GUI and command line interfaces. The internal extraction algorithm is specialized for VLSI interconnect structures but not exclusively, as long as the structure is of Manhattan geometry and embedded in a uniform dielectric material. -
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CDSbank
multi-sequence extraction, filtering & formatting
CDSbank is a database that stores both the protein-coding DNA sequence (CDS) and amino acid sequence for each protein annotated in Genbank. CDSbank also stores Genbank feature annotation, a flag to indicate incomplete 5’ and 3’ ends, full taxonomic data, and a heuristic to rank the scientific interest of a species. This rich information allows fully automated data set preparation with a level of sophistication that meets or exceeds manual processing. Defaults ensure ease of use for typical... -
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ASCEND is a modelling environment and solver for large or small systems of non-linear equations, for use in engineering, thermodynamics, chemistry, physics, mathematics and biology. Solvers for both steady and dynamic (NLA & DAE) problems, are provid
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X-Freq
X-Ray Reflectivity Frequency Analysis
Analyze the thicknesses of a sample from an x-ray reflectivity dataset using Fourier Transform techniques. -
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Webapp
A web interface to the SnowyOwl gene prediction pipeline
