Search Results for "detection" - Page 50
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Showing 1991 open source projects for "detection"
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BIRAP
Bacterial Intergenic Region Analysis Pipeline
BIRAP (Bacterial Intergenic Region Analysis Pipeline) is an open source, easy to use Perl pipeline that can be used to re-annotate bacterial genomes using experimental data. The tool integrates expression profile derived from RNA-seq and/or proteogenomics, compares it with existing in silico annotation and helps validate annotation, identify novel protein coding regions, putative non-coding RNA as well as help correct er-rors in the existing annotation. The pipeline requires “pileup” output... -
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cvastroalign
video align tool for astrophotography
cvastroalign is a program that loads a video sequence, aligns and stacks the selected frames obtaining an image as result of this process.. -
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chipexo
model based analysis of ChIP-exo data
...MACExo has the following four steps: 1) sequencing data normalization and bias correction; 2) signal consolidation and noise reduction; 3) single nucleotide resolution border detection using Chebyshev Inequality; and 4) border matching using Gale-Shapley’s stable matching algorithm. When applied to yeast Reb1 and human CTCF ChIP-exo data, MACE is able to define TFBSs with higher sensitivity, specificity and spatial resolution, as evidenced by multiple criteria, such as motif enrichment, sequence conservation, nucleosome positioning, and open chromatin states. -
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Bot simulation main purpose is to help real bot developer to test their bot behaviors thanks to an openGL simulation with collision detection and a scriptable behavior in LUA.
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MZmine 2
A framework for differential analysis of mass spectrometry data
MZmine 2 is a framework written in Java for differential analysis of mass spectrometry data. -
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SSHCure
Flow-based SSH Intrusion Detection System
We have just released SSHCure 3.0, which is available in our new repository at GitHub: https://github.com/sshcure/sshcure/. SSHCure is an intrusion detection system (IDS) that has been designed as a plugin for NfSen (http://nfsen.sourceforge.net). It detects and analyzes SSH intrusion attempts. -
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LiDSiM
LImits of Detection SImulation for Microbes
LiDSiM is a tool to estimate the possible influence of error-tolerant database searches and proteogenomic approaches on the amount of unidentified spectra and the ratios of taxonomic relationship of identified spectra in MS/MS studies of microbial proteomes. For more details about LiDSiM and its functioning, please see "Estimating the Computational Limits of Detection of Microbial Non-Model Organisms" Mathias Kuhring and Bernhard Y. Renard (http://onlinelibrary.wiley.com/doi/10.1002/pmic.201400598/abstract) PLEASE NOTE, it is recommended to read the paper and the readme.txt file before using LiDSiM. -
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vim-tmux-navigator
Seamless navigation between tmux panes and vim splits
The vim-tmux-navigator plugin enables smooth and consistent navigation between splits within Vim (or Neovim) and panes in tmux, using a unified set of hotkeys. This means that instead of treating Vim splits and tmux panes as completely separate navigation domains, you can press the same directional keys (for example Ctrl-h / Ctrl-j / Ctrl-k / Ctrl-l) and move seamlessly between them. The plugin detects when you are at the edge of a Vim split and hands off navigation to tmux, or vice versa,... -
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Facial Expression Recognition
Facial Expression Recognition System - Matlab source code
...The extracted feature vectors in the reduced space are used to train the supervised Neural Network classifier. This approach results extremely powerful because it does not require the detection of any reference point or node grid. The proposed method is fast and can be used for real-time applications. -
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AnomalyDetection
Anomaly Detection with R
AnomalyDetection is an R package developed by Twitter for detecting anomalies in seasonal univariate time series. It implements the Seasonal Hybrid Extreme Studentized Deviate (S‑H‑ESD) test, which reliably identifies both global and local outliers in data with trends and seasonality—commonly applied to system metrics, engagement data, and business KPIs. -
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ADTEx
Aberration detection in tumour exome
Aberration Detection in Tumour Exome (ADTEx) is a tool for copy number variation (CNV) detection for whole-exome data from paired tumour/matched normal samples. -
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RAREVATOR
Tool for the detection of variants in rare reference allele loci
RAREVATOR (RAre REference VAriant annotaTOR) is a tool for the identification and annotation of germline and somatic variants in rare reference allele loci from second generation sequencing data. RAREVATOR has been published on BMC Genomics. Magi A, D'Aurizio R, Palombo F, Cifola I, Tattini L, Semeraro R, Pippucci T, Giusti B, Romeo G, Abbate R, Gensini GF. Characterization and identification of hidden rare variants in the human genome. BMC Genomics. 2015 Apr 24;16:340. doi:... -
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Voxel CAD. Open source voxel editing and analyzing software. Edit and create multi-material voxel objects. Simulate the dynamics in a quantitative physics sandbox to test engineering designs or make moving creatures. www.voxcad.com for videos.
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IMAGINE
Biological image viewer and processor
Detection, enumeration, and sizing of biological organisms by image analysis. -
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ezSIFT
An easy-to-use standalone SIFT library written in C/C++
*************************************************************************** Updated 06/28/2018 The ezSift project has moved to https://github.com/robertwgh/ezSIFT *************************************************************************** The SIFT (scale-invariant feature transform) algorithm is considered to be one of the most robust local feature detector and description methods. Most of the open-source SIFT implementations rely on some 3rd-party libraries. Some of them even rely... -
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Pedestrian detection & tracking
real time pedestrian detection and tracking and distance estimation
In this project, given a stream of video, we want to detect people, track them, and find their distance in a real-time manner. -
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SEM_bestShortestPath
A SEM-based method for disease module detection
SEM_bestShortestPath is a Structural Equation Modeling (SEM)-based methodology to evaluate the most important shortest paths between differentially expressed genes in biological interaction networks, with absolutely no need of user-defined parameters or heuristic rules, enabling a free-of-bias discovery and overcoming common issues affecting recent network-based algorithms. SEM-bsp is based on Structural Equation Modeling techniques to detect significantly perturbed sub-networks (disease... -
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Tapita
Tapita is a BPM detector.
Tapita (snack in spanish) is a BPM detector trough keyboard, MIDI and jack written in C with GTK2. -
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Cenobi
cost estimation and management accounting, using neural networks
Cenobi is designed for management accountants, not (only) for statisticians and data mining experts. Carefully arranged default settings make sure you can concentrate on Cenobi's many accounting features rather than worrying about setting up artificial neural networks or genetic algorithms, which are the main machine learning tools under Cenobi's hood. Cenobi's main benefits are: - ease of use - Utilizing artificial neural networks to estimate cost relationships, Cenobi is able to... -
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51Degrees-PHP
Mobile Device Detection for PHP - 4 Step Setup - 3 Minutes
4 Steps - Download, Unzip, Include, Go Mobile with PHP Add mobile device detection to PHP the easy way with 51Degrees.mobi. No cloud services, no external plug-ins, all Mozilla Public Licence source code. It's a great alternative to WURFL or DeviceAtlas. Step 1 - Download the Zip file from SourceForge. Step 2 - Unzip the file into a directory of your choice within your project. Step 3 - Then add the following code to your PHP page file: include_once('path/to/51Degrees.php'); include_once('path/to/51Degrees.usage.php'); (It is recommended for performance purposes that these lines are included after a session_start();) Step 4 - Get the details about the device that is accessing your site with code like this: if ($_51d[‘IsMobile’] == TRUE) { //Start coding for a mobile device here. } Read the full user guide on our web site. -
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Anti SQL Inject
Block SQL Injections as soon as their detected[Alpha]
This PHP Library blocks common SQL injection attacks its as simple as calling some code, as a basic demo of what code shall be put in, require('antiinect.php'); //Import the library antiinject($parameter,true); //call the libraries primary function and true equals to block the attack more info on how to use the library can be found on the wiki Currently Supports(ALPHA 1.2): Apostrophe Based attacks(') union select based detection * order by * based detection example page(no SQL base yet) Planned to do(ALPHA 1.3): Add Tracking(blocked attacks,protected hits. Only counting) with disable feature Make config.php file Maybe Make a example site? -
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bictools
bictools - a package to faciliate the analysis of SAAVs using BICEPS.
bictools - a python package to perform variant detection on proteomic MS data using BICEPS (Renard et al. 2012). This repository contains a convenient KNIME workflow to perform the analysis of MS data via OpenMS and a python package (bictools) to handle results from the peptide identification from BICEPs. The combination of both utilities allows to execute the proteomic variant detection workflow. -
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PlayAuthenticate
An authentication plugin for Play Framework 2.x (Java)
...The sample shows how to do this with Twitter bootstrap. Linking of accounts (e.g. one local user with multiple authentication providers). Linking can be done automatically or after asking the user (default) Merge detection (e.g. a user created two unconnected local accounts) Account merge can be done automatically or after asking the user (default) Tight deadbolt2 authorization integration (Sample included). HTTPS support (for OAuth2 redirect links and email verification). Verification email used by Email/Password provider is fully customizable and localizable and can be sent in either text or HTML or both. -
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SoilNIR
NIR instrument Software
vis - nir spectra instrument software for soil detection -
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browser.js
A Javascript library to detect various browser properties
browser.js is a Javascript library to detect specifics concerning the users browser. Instead of trying to figure out yourself what every browser yourself, get a nice array layout of properties using browser.js. The project isn't public yet. The website is not yet complete and will now take you to the projects main website as the development website is under construction. The following web browsers can be detected using the script. Note that this is a Technical Alpha and the gap for...
