Search Results for "quantitative" - Page 5
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Showing 168 open source projects for "quantitative"
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bitquant
Open source quantitative tools for financial trading
This is the sourceforge site for Bitquant Research Laboratories. We are developing a thin client fully open-source for trading financial products including bitcoin. -
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GASiC
Genome Abundance Similarity Correction
One goal of sequencing based metagenomic analysis is the quantitative taxonomic assessment of microbial community compositions. However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. -
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fitGCP
Fitting genome coverage distributions with mixture models
...Thus, biases such as fragmented or erroneous reference genomes often remain unaccounted for. Making this information accessible can improve the quality of sequencing experiments and quantitative analyses. fitGCP is a framework for fitting mixtures of probability distributions to genome coverage profiles. Besides commonly used distributions, fitGCP uses distributions tailored to account for common artifacts. The mixture models are iteratively fitted based on the Expectation-Maximization algorithm. Please find the accompanying paper here: http://dx.doi.org/10.1093/bioinformatics/btt147 -
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Voxel CAD. Open source voxel editing and analyzing software. Edit and create multi-material voxel objects. Simulate the dynamics in a quantitative physics sandbox to test engineering designs or make moving creatures. www.voxcad.com for videos.
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WebRTCBench
A benchmark for WebRTC implementations
WebRTCBench is a benchmark suite to provide quantitative comparison of WebRTC implementations across different browsers and architectures. It also includes a database interface for storing measurement results. The benchmark was developed at the Parallel Architectures and Systems Lab at the University of California Irvine supported by a generous grant from Intel Corporation. -
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MatStrat is a new open source Matlab toolbox that generates publication-quality stratigraphic plots and enables quantitative analysis of stratigraphic data.
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qPMerge
phospho-peptide merge tools for Galaxy
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A collection of projects I have developed in the past years. It contains: - a tool to compute height and angle of objects above horizon - a proof of concept of DFT and DWT to reduce audio files - a quantitative library with OOorg interface for Calc
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A collection of code, bundled into a single R package, to perform several aspects of data management, image pre-processing, data analysis and statistical inference related to the quantitative analysis of dynamic contrast-enhanced MRI (DCE-MRI).
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IQuant
A pipeline for quantitative proteomics based upon isobaric tags
IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. -
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CoDeCZ
Derive copy number status from targeted sequencing data
CoDeCZ derives copy number state from targeted sequencing data on gene or exon level. Results are NOT true copy number however, but they are semi-quantitative: It uses the modified z-score to calculate deviation in normalized coverage per specified region. The higher the Z-score, the higher the copy number. The final z-score depends on the quality of the data and the makeup of the reference pool. -
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High Speed Image Analysis for MATLAB
An integrated toolbox for MATLAB analysis of high-speed video
High-speed imaging is a powerful tool for capturing fast events, but converting qualitative video observations to quantitative analysis is challenging. This toolbox is being developed to support analysis of high-speed video in Hall thrusters and other plasma devices. In particular, it enables visualization and Fourier analysis of rotating spoke instabilities in the annular Hall thruster discharge channel. We currently have two developers but are always open to more. -
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The CM Engine translates digital images of rectangular plates that contain gridded colonies into quantitative data. It currently contains 3 analysis modes to ensure accurate measurements no matter how cells are deposited onto the agar.
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Vanagandr
Basic Library for Quantitative Finance
Basic Library for Quantitative Finance -
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QuantComponents
Free Java components for Quantitative Finance and Algorithmic Trading
An open-source framework for financial time-series analysis and algorithmic trading, based on Java and OSGi, with an Eclipse front-end. * Highly modular: usable as plain java API, OSGi components, or integrated into Eclipse * Standalone or client-server architecture, depending on performance and reliability needs * Integrated with Interactive Brokers through IB Java API * Generic broker API, it can easily be extended to work with other brokers * It works with historical and/or realtime... -
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QUAD
QUAD Memory Access Profiling Toolset
QUAD (Quantitative Usage Analysis of Data) consists of several tools that provide a comprehensive overview of the memory access behavior of an application. The primary goal is the detection of the actual data dependencies at the function-level. -
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java-quant
Quantitative financial models implemented in Java
The project contains classes for implementation of binomial option pricing model and Newton method for finding roots of a function in Java. You can browse the source code and download the full distribution package. -
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Gklab bring you another dose of General Knowledge ,General awareness,Computer knowledge,Current Affairs questions and answers ,Quantitative and reasoning questions and model question papers for better preparation of competitive exams.
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qcasoft
Qualitative Comparative Analysis with Fuzzy Data in JAVA
...The program is based on the work of C.C. Ragin. For more information, see the following articles: * Ragin, C. C., 1987, The Comparative Method. Moving beyond qualitative and quantitative strategies, Berkeley/Los Angeles/London: Univ. of California Press. * Ragin, C. C., 2000, Fuzzy-Set Social Science, Chicago/London: University of Chicago Press. * Ragin, C. C., 2000, Redesigning Social Inquiry: Fuzzy Sets and Beyond, Chicago/London: University of Chicago Press. -
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MDLEditor
Editor for the Model Developing Language (MDL)
...The MDL is set up to capture the definition of drug models together with their parameters and data. The MDL is split into a Model Coding Language (MCL) to describe quantitative models and a supplementary Task Execution Language (TEL) to describe how the input from the MCL will be used to generate the desired output. The MDL editor is an xText-based application for writing MDL scripts and converting them into an internal format for further processing. -
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LFQuant
Label-free Quantitative Analysis Tool for LC-MS/MS Proteomics Data
LFQuant is a new analysis tool for label-free LC-MS/MS quantitative proteomics data. It is compatible with high-resolution mass spectrometers (Thermo RAW data) and two popular database search engines (SEQUEST and MASCOT) with target-decoy search strategy. LFQuant is written in Microsoft Visual C++ 2005 and runs on any Windows system. This software and any associated documentation are provided “as is” and there is no warranty for this software. -
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NetQL
A quantitative finance .NET library wrapping QuantLib.
A quantitative finance .NET library wrapping QuantLib (http://quantlib.org/). A free/open-source tool for derivatives and financial engineering. -
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Altrans
Quantification of Splicing Events
...The link counts ascertained from unique regions are normalized with the probability of observing such a link given the insert size distribution which is referred to as link coverage. Finally the quantitative metric produced is the fraction of one link’s coverage over the sum of the coverages of all the links that the initial first exon makes. -
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Stochastic gradient boosting
A java implementation of the stochastic gradient boosting method
Stochastic gradient boosting method using trees is flexible without sacrificing fitting performance in general. The method can be applied to either categorical data or quantitative data. The current Java implementation uses the L2 norm loss function, which is suitable for the general regression task. -
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RICmerge
Improved Isobaric Label Reporter Ion Assignment
This script and underlying data are in support of the manuscript entitled "Improved reporter ion assignment of raw isobaric stable isotope labeled LC-MALDI-TOF/TOF MS/MS spectral data for quantitative proteomics". Authors: Thomas Jakoby, Andreas Tholey and Bart H.J. van den Berg* * = corresponding author bvdberg@live.com
