Search Results for "parallel genetic algorithm" - Page 5
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Showing 242 open source projects for "parallel genetic algorithm"
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Molecular Measurer
Parallel, Stochastic Measurement of Molecular Surface Area
A program to measure molecular surface area. The algorithm is GPU-accelerated using CUDA and is described in the research paper linked from the project home page. The input to the program is xyzr files, which can be generated from pdb files. -
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Parallel DPCM
C# Parallel implementation of DPCM alogrithm
An implementation of the DPCM algorithm for compressing and decompressing an avi video file. It shows the compression size, as it is saved in a txt file near the avi original file. The decompression results in another avi file, saved near the original file. If the width and height of the frames aren't a multiple of 16, they are completed with black pixels. The pixel macroblocks of 16x16 are generated on separate threads for each frame and they are replaced on frames at decompression... -
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Reactor Breeder
A Genetic Algorithm for Reactors in StarMade
This software uses a genetic algorithm to "evolve" reactor designs for Schema's space-simulation game, Star-Made (http://star-made.org/). One of the more unique aspects of the game is that ship power management is not as simple as filling a cube with power generation blocks. This mechanism leads to difficulties in getting maximal power generation out of such reactors. -
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ITS-GenTL
Traffic Lights parallel optimization software using Genetic Algorithms
ITS-GenTL - Intelligent Transport System Genetic Algorithm Traffic Lights optimizer This software is aimed to optimize traffic lights characteristics for traffic flows in urban networks in real-time using Genetic Algorithms. Now it uses SUMO project modeling software to model traffic flows while iteration of optimization process. -
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libfgen
Library for optimization using a genetic algorithm or particle swarms
libfgen is a library that implements an efficient and customizable genetic algorithm (GA). It also provides particle swarm optimization (PSO) functionality and an interface for real-valued function minimization or model fitting. It is written in C, but can also be compiled with a C++ compiler. Both Linux and Windows are supported. -
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QuasiRecomb
Probabilistic inference of viral Quasispecies
Please get the binary latest version at https://github.com/armintoepfer/QuasiRecomb/releases Description: RNA viruses are present in a single host as a population of different but related strains. This population, shaped by the combination of genetic change and selection, is called quasispecies. Genetic change is due to both point mutations and recombination events. We present a jumping hidden Markov model that describes the generation of the viral quasispecies and a method to infer its parameters by analysing next generation sequencing data. We offer an implementation of the EM algorithm to find maximum a posteriori estimates of the model parameters and a method to estimate the distribution of viral strains in the quasispecies. ... -
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Genetic Polynomials
genetic algorithm to approximate a set of points with polynomial
genetic algorithm to approximate a set of points with polynomial -
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DJDarwin
A Genetic algorithm approach to creating beats.
The program puts beats through evolution - survival, mutations, reproduction. The purpose, in the words of Africa Bambaataa - Looking for the perfect beat. Using a genetic algorithmic framework, the user's taste defines a Beat fitness function - she decides which beats survive and breed, and which join the choir invisible. In addition, the user can easily define an automatic fitness function, put the program on 'autopilot' mode, and let it speed up evolution. Different types of... -
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texgenpack
Texture compression and conversion program with KTX and DDS support.
texgenpack is a texture compression and conversion program featuring a command line utility and a simple GUI program . Compression is implemented using a genetic algorithm. It supports compression, decompression, conversion and comparison of texture and image files. The image format supported is PNG, while for textures there is support for KTX, PKM and DDS using ETC1, ETC2, DXT1/3/5 or BPTC (BC7) texture compression. Several uncompressed texture format are also supported. This program requires the installation of libfgen, also avalable on SourceForge. -
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MapPSO is a tool for Ontology Alignment, which uses Discrete Particle Swarm Optimisation. A particle swarm is used to search for the optimal alignment. The algorithm is massively parallel and adapts naturally on parallel architectures.
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Open Genetic Algorithm Toolbox
This is a MATLAB toolbox to run a GA on any problem you want to model.
This is a toolbox to run a GA on any problem you want to model. You can use one of the sample problems as reference to model your own problem with a few simple functions. You can collaborate by defining new example problems or new functions for GA, such as scaling, selection or adaptation methods. In that case, you should then include your credits in the file, upload it to matlab central and contact the author. Suggestions are also welcome but naturally I won't be able to attend... -
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EmployeesProfileViewer is my MSc final project. Consists of an application to represent the employees of an organization in a graphic map according to personal skills, using their evaluations on the different competences which the company needs. This software generates a graphical representation of the employees in a 2D map of coordinates, that pojects each worker as a figure in the map. The geometric characteristics of each one of these shapes will tell us how are the skills of the...
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Java Evolutionary Computation Library
As of 2012-12-18, this project may now be found at Google Code.
As of 2012-12-18, this project may now be found at http://http://code.google.com/p/paba JECO is a Evolutionary Computation Library deveoloped in Java. It includes a variety of evolutionary optimization techniques such as genetic algorithm, genetic programming, evolutionary mapping methods, particle swarm optimization, ant colonies, etc. -
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Bouc-Wen-Baber-Noori model of hysteresis
Compute parameters of the Bouc-Wen-Baber-Noori model of hysteresis
..."A Fast and Elitist multi-objective Genetic Algorithm: NSGA-II". Journal IEEE Transactions on Evolutionary Computation (IEEE-TEC). 2002. Vol. 6. No. 2. pp. 182-197. - Gilberto A. Ortiz, Diego A. Alvarez, Daniel Bedoya-Ruiz. "Identification of Bouc-Wen type models using multi-objective optimization algorithms". Computers & Structures. Vol. 114-115. pp. 121-132. 2013. -
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Darwin 2: Java Framework for Evolutionary Computation (genetic algorithm, GA). A true framework with out-of-the-box functionality and extensibility of all classes. Interface-based pattern with dependency-injection to configure components.
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Clusterfit
Show stellar evolution and open clusters in a color-magnitude diagram
...In addition, it can show the CMD of a large number of existing open clusters, based on scientific survey data, and overlay isochrones (the curve in a CMD from stars born at the same time) to determine the age, distance and interstellar reddening of the cluster. Determining these parameters can be done automatically with a global search algorithm (more specifically a genetic algorithm). This program requires the installation of the libfgen package, also available on SourceForge. -
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C++ software which implements serial and parallel Nullspace Algorithm based on algebraic rank test for the computation of elementary flux modes.
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This project provides a set of Python tools for creating various kinds of neural networks, which can also be powered by genetic algorithms using grammatical evolution. MLP, backpropagation, recurrent, sparse, and skip-layer networks are supported.
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Evolving Objects
This project have been merged within Paradiseo.
See the new project page: https://nojhan.github.io/paradiseo/ (Archived project page: http://eodev.sourceforge.net/) -
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DecGPU: CUDA-based Error Correction
The first distributed and parallel short-read error corrector on GPUs
DecGPU (Distributed Error correction on GPUs) is a parallel and distributed error correction algorithm for large-scale short read assembly. It is implemented using CUDA C++ and MPI, running on a GPU cluster. -
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Genetic Basis
A general genetic algorithm framework
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Parallel Content-Based matching algorithm running on multi-core CPUs and on CUDA GPUs. It includes a translator from the SIENA publish/subscribe system events and subscriptions and a large number of workloads to test its performance.
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String Distance with a Genetic Algorithm
Calculate String Distances with Genetic Algorithm
This measures the amount of universal time-units a classical Genetic Algorithm needs for one String to evolve into another, thus representing a perfect way to measure the String-metric distances. The smallest distance is -1 while the largest is infinite. This means that calculations with -1 to -0 universal-time units came from the past, and that such Strings already exist in this universe; thus representing a negative value. -
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This project represents a parallel implementation of a hand gesture recognition algorithm in C# using .Net Framework 4 and AForge .Net Framework. The software can detect 3 hand gestures: Stop, Left, Right. More details can be found in the documentation present in the project.
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PyPedal is a Python module that provides tools for the manipulation of pedigrees, simple visualization of pedigrees, and the calculation of measures of genetic diversity from pedigrees.
