Showing 380 open source projects for "open cell"

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  • 1

    MoPAC

    The Modular Pipeline for the Analysis of CRISPR screens

    To facilitate the comparison of gene essentialities in two or more cell samples, we propose MoPAC (Modular Pipeline for Analysis of CRISPR screens), a Shiny-driven interactive tool for differential essentiality analysis in CRISPR/Cas9 screens. For installation and usage instructions please refer to the wiki page.
    Downloads: 0 This Week
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  • 2
    NYCOpenData-Profiling-Analysis

    NYCOpenData-Profiling-Analysis

    Open Data Profiling, Quality and Analysis on NYC OpenData dataset

    Open data often comes with little or no metadata. You will profile a large collection of open data sets and derive metadata that can be used for data discovery, querying, and identification of data quality problems. For each column, identify and summarize the semantic types present in the column. These can be generic types (e.g., city, state) or collection-specific types (NYU school names, NYC agency). For each semantic type T identified, enumerate all the values encountered for T in all...
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  • 3
    React-Datasheet

    React-Datasheet

    Excel-like data grid (table) component for React

    This small component allows you to integrate an excel-like datasheet. By default, the spreadsheet handles keyboard navigation and copy-pasting of cells. This example computes expression underneath using mathjs. On an invalid expression, the cell changes color to show the error. Note that react-datasheet does not handle the validation nor the formula computation. Custom renderers allow you to add significant new capabilities to your sheets without requiring changes to react-datagrid itself....
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  • 4
    PMCGPU

    PMCGPU

    Parallel simulators for Membrane Computing on the GPU

    Membrane Computing is a new research area (within Natural Computing) that aims to provide computing devices abstracted from the functioning and structure of living cells. These devices are called P systems. The objective of this project (PMCGPU) is to bring together all the researchers working on the development of parallel simulators for P systems, specially those using the GPU (e.g. CUDA, OpenCL, etc). Other parallel platforms are also welcome (multicore and manycore, FPGAs,...
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  • 5
    The openFuelCell project is a forum to develop open source computational fluid dynamics (CFD) software to model fuel cells. Fuel cells http://en.wikipedia.org/wiki/Fuel_cell are devices that convert hydrogen and oxygen to water and electricity, and are promising renewable energy conversion devices. Computational fluid dynamics tools are used to size and rate fuel cell systems. OpenFoam is an open source CFD toolbox, available for downloading at http://www.openfoam.com/, written in C++ and conforming to the object-oriented paradigm.
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  • 6

    PyPWD

    A Python3 Password Manager, with encryption and without connection

    https://www.garanet.net/it-blog/python-password-manager/ A Python3 Password Manager, with encryption and without an Internet connection. How it Works: First Run: PyPWD > Creates Master Key with your master username and password (Do not forget it or modify the config file, otherwise you'll be not able to open your password manager anymore). PyPWD > Saves a DataFrame as an encrypted CVS and all passwords are encrypted too, with key and the master password. Login: PyPWD >...
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  • 7
    TJ's Digital Image Application Set

    TJ's Digital Image Application Set

    Digital image processing programs for Windows and Linux systems.

    tjsdigitalimage project provides a package containing a GUI-based image processing program called "Voyager" together with a collection of command-line image manipulation functions, suitable for use with very large images (longer than 4 GiB). Available in native 32 bit and native 64 bit versions for Intel 586/x64 and PPC/Cell on Windows and Linux.
    Downloads: 0 This Week
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  • 8
    OME-3DR

    OME-3DR

    3D cell reconstruction and quantitative analysis based on OME data

    For big OME data analysis, we integrate commonly used quantitative methods, describe our novel strategies to quantify and analyze biological markers related to the cell or organelle spatial-coordinate model, and present open-source OME-3-Dimensional Reconstruction (OME-3DR), a flexible, programmable and batch-oriented tool based on OME data, for reconstructing 3-dimensional (3D) spatial conformations and conducting further analyses, such as the identification, counting, localization and tracking of bio-imaging markers, calculation of model-contour parameters for association analyses, establishing spatial-coordinate system, 3D co-localization analyses and so on. ...
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  • 9
    EPPlus

    EPPlus

    Create advanced Excel spreadsheets using .NET

    ...With the new license EPPlus is still free to use in some cases, but will require a commercial license to be used in a commercial business. Create advanced Excel spreadsheets using .NET, without the need of interop. EPPlus is a .NET library that reads and writes Excel files using the Office Open XML format (xlsx). EPPlus has no dependencies other than .NET. This project started with the source from ExcelPackage. It was a great project to start from. It had the basic functionality needed to read and write a spreadsheet. Advantages over other: EPPlus uses dictionaries to access cell data, making performance a lot better. Complete integration with .NET.
    Downloads: 4 This Week
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  • 10
    Tablesaw

    Tablesaw

    A group of plugins for responsive tables

    The Stack Table stacks the table headers to a two column layout with headers on the left when the viewport width is less than 40em (640px). If you only want to use the Stack Table and don’t want all the extra features (save yourself some bytes), Tablesaw provides a Stack-Only version. To opt-out of inline label creation (the table header cell text that shows at small breakpoints) on a per-table basis, use <table data-tablesaw-no-labels>; on a per-row basis, use <tr data-tablesaw-no-labels>;...
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  • 11
    Excel Calendar
    Excel Calendar allows you to quickly create annual calendars and highlight key dates in different colors using a table.
    Downloads: 2 This Week
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  • 12
    ComplexHeatmap

    ComplexHeatmap

    Make Complex Heatmaps

    ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with sidebars, annotations, clustering, etc. Highly customizable layout: combining different heatmaps, arranging and...
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  • 13
    pyspread

    pyspread

    Python spreadsheet application

    Pyspread is a non-traditional spreadsheet application that is based on and written in the programming language Python. The goal of pyspread is to be the most pythonic spreadsheet. Pyspread expects Python expressions in its grid cells, which makes a spreadsheet specific language obsolete. Each cell returns a Python object that can be accessed from other cells. These objects can represent anything including lists or matrices. Dependencies + Python (>=2.7, <3.0) + numpy...
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  • 14

    baffle

    Baffle Is an extension to Brainfuck language, it adds a stack, more

    baffle Is an extension to BF language (https://esolangs.org/wiki/brainfuck), which itself in turn is a extension of Turing machine. baffle extends BF by adding a stack, support for procedures, adding more arithmetic instructions, and a register. baffle can run original BF programs, and while it's not the fastest implementation of BF, but it's written in such a way that makes it easier to replace the instruction set, and to write similar languages. Every cell is a single byte,...
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  • 15
    Jupyter Themes

    Jupyter Themes

    Custom Jupyter Notebook Themes

    jupyter-themes brings theme management to classic Jupyter Notebooks with a command-line tool that can restyle the interface, code cells, and UI chrome in seconds. It ships a catalog of popular dark and light themes and lets you customize fonts, font sizes, cell widths, and toolbar visibility so the notebook matches your preferred reading and coding ergonomics. The theming system adjusts CodeMirror syntax highlighting to keep code legible against chosen backgrounds and provides options to...
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  • 16

    SPARTA

    Direct Simulation Monte Carlo (DSMC) Simulator

    SPARTA is a parallel DSMC code for performing simulations of low-density gases in 2d or 3d. Particles advect through a hierarchical Cartesian grid that overlays the simulation box. The grid is used to group particles by grid cell for purposes of performing collisions and chemistry. Physical objects with triangulated surfaces can be embedded in the grid, creating cut and split grid cells.
    Downloads: 1 This Week
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  • 17
    grd

    grd

    A CSS grid framework using Flexbox. Only 321 bytes (Gzipped)

    A CSS grid framework using Flexbox. Simple and provides just 2 base classes Grid and Cell and some modifiers. Light-weight, only 321 bytes (Gzipped). Flexible, easy-to-use Flexbox features. Flexible Box Layout Module and calc() as CSS unit values used in Grd are available on modern browsers (Chrome, Firefox, Safari, Opera, Edge, and IE11). If you want to use Grd with Sass, you can choose grd-sass as Sass port.
    Downloads: 1 This Week
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  • 18

    JETT

    JETT - Java Excel Template Translator

    JETT is a Java 5.0 API that reads an Excel spreadsheet as a template, takes your data, and creates a new Excel spreadsheet that contains your data, formatted as in the template. It works with .xls and .xlsx template spreadsheets.
    Downloads: 1 This Week
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  • 19
    chemfiles

    chemfiles

    Modern library for chemistry file reading and writing

    Chemfiles is a modern and high-quality library for reading and writing trajectory files created by computational chemistry simulations program. These trajectories contains atomic positions, velocities, names, topology and sometimes more. Running simulations produce enormous amounts of data, which has to be post-processed to extract physical information about the simulated system. Chemfiles provides an interface to access this information which is - unified: the same code will work with...
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  • 20
    Psygraph

    Psygraph

    Code for the Psygraph mobile application

    Psygraph is a Personal Data Collector (PDC) and activity timer. It includes a stopwatch, timer, counter, and note taker (voice recorder), each of which collects data from the device’s sensors (e.g. the device velocity and location (via GPS)). Although the interface is simple (a button or two on each screen), the data is saved for later analysis and display (you can store and view the data on WordPress). It is a scientific instrument that is easy to use. It makes an excellent general-purpose...
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  • 21
    GlycoPAT

    GlycoPAT

    Comprehensive, open-source tool for glycoproteomics MS data analysis

    ...Lo, Jun Li, Jun Qu and Sriram Neelamegham. " A comprehensive, open-source platform for mass spectrometry based glycoproteomics data analysis", Molecular Cell Proteomics, 2017 Sep 8, in press. https://doi.org/10.1074/mcp.M117.068239
    Downloads: 2 This Week
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  • 22

    TX-TL modeling toolbox

    Modeling and analysis tools for the TX-TL cell-free expression system

    This project contains tools for using the TX-TL cell-free expression system. These tools include component models for simulating and analyzing biomolecular circuits, as well tools for composing circuits and creating more complex systems. NOTE: This project has been shifted to GitHub: https://github.com/BuildACell/txtlsim
    Downloads: 0 This Week
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  • 23
    ngx-datatable

    ngx-datatable

    A feature-rich yet lightweight data-table crafted for Angular

    ngx-datatable is an Angular component for presenting large and complex data. It has all the features you would expect from any other table but in a light package with no external dependencies. The table was designed to be extremely flexible and light; it doesn't make any assumptions about your data or how you: filter, sort or page it. It was built for modern browsers using TypeScript, CSS3 and HTML5 and Angular 8.0.0. This is the sister project of the angular-data-table that is designed for...
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  • 24

    JavaMutex

    Provides 100% pure Java mutual exclusion.

    Freely redistributable open source 100% pure Java for mutual exclusion. Read-write and read-only reentrant lock, condition variable, atomic wraps for Boolean, Integer, Long, and Reference. Cell pool with optional locking, object exchanger, Intersect.
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  • 25
    TSWeChat

    TSWeChat

    A WeChat alternative. Written in Swift 5

    TSWeChat - A WeChat alternative, updated to Swift 5. The cell image in TSChatImageCell is drawn by using a Mask Layer. The chat background can be changed freely so that UI will look perfect. Audio wav files can be automatically converted into amr files which facilitate file transfer to Android devices. Both of the two types of files have been cached.
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