Search Results for "b-tree" - Page 48
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Showing 2578 open source projects for "b-tree"
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pkgBackup is a Perl program for backing up a home Linux system using *.rpm or *.deb based distros. It archives only those files which (A) are part of a package; and (B) have changed since you installed the package. You can store non-package files.
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**(9 march 2016) this project is continued on github : http://jaapkroe.github.io/polypy ** Python script to analyze (shortest-path) rings in structures read from xyz-files. It can be useful for example to identify defects in crystal structures or molecules.
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GASiC
Genome Abundance Similarity Correction
...You can find the accompanying paper here: http://nar.oxfordjournals.org/content/41/1/e10.short Thanks to the great work of the SeqAn team, you can now use GASiC as a Knime workflow: https://github.com/seqan/knime_seqan_workflows/tree/master/metagenomics_gasic_workflow -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting clade-defining polymorphism. This functionality has been implemented using the tabix tool on the server side, providing simple and rapid access to the information at each tree node, including informative SNPs stored in VCF-similar files. ... -
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...ADOMA is a commandline program that can easily be used in pipelines. For more information check the README.md in the Files section. How to cite ADOMA: Zaal, D. and Nota, B. (2016), ADOMA: A Command Line Tool to Modify ClustalW Multiple Alignment Output. Mol. Inf., 35: 42–44. doi: 10.1002/minf.201500083 http://onlinelibrary.wiley.com/doi/10.1002/minf.201500083/abstract
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Aspose for NetBeans
Aspose - Your File Format Expert
Aspose for NetBeans project enables NetBeans IDE users to create a new NetBeans project through an Aspose Project Wizard. Through this wizard, developers can select and download the latest Aspose File Format Java libraries and samples of their choice. -
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Aspose for Eclipse
Eclipse plugin for Aspose File Format Java APIs
Aspose for Eclipse project enables Eclipse IDE users to create a new Eclipse project through an Aspose Project Wizard. Through this wizard, the developers can select and download the latest Aspose File Format Java libraries and samples of their choice. -
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sha3sum and then some
sha3sum - A demonstration of the Keccak permutation.
...Usage is much more than a hash function. The NIST compatible settings are subject to change when they publish FIPS PUB 180-5. I wrote this program when evaluating the permutation and developing tree hashing for the Intel(R) MIC architecture. -
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akiraLINUX
akiraLINUX - Linux für den Desktop
... - "akiraLINUX 14.1 on Lubuntu" - 32 Bit (basiert auf Lubuntu 14.04 LTS,Download unter http://stefanius.de/akiralinux-14-1-on-lubuntu-32bit-veroeffentlicht) - "akiraLINUX 14.1 on Xubuntu" - 64 Bit (basiert auf Xubuntu 14.04 LTS, Download unter http://stefanius.de/akiralinux-14-1-on-xubuntu-veroeffentlicht) - "akiraLINUX 14.1 on Zorin OS" - 64 Bit (basiert auf Zorin OS 9, das wiederum auf Ubuntu 14.04 beruht) Download unter http://stefanius.de/akiralinux-14-1-on-zorin-os-64bit-veroeffentlicht Alle Varianten verfügen über eine nahezu identische Softwareausstattung und wurden von mir speziell für (deutschsprachige) Linux Um- & Neueinsteiger konzipiert. akiraLINUX kann vom Anwender als Livesystem z. B. auf einem USB-Stick in Ruhe getestet werden. Mehr Informationen: http://stefanius.de/category/akiralinux -
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iptables-cb
Scripted service managing iptable blocks by ISO
...Configuration is managed through a simple file listing ISO codes of countries to block in /etc/sysconfig much as any other service. Includes optimizations using ipset and leverage of a tree hierarchy in the generated iptables rules to ensure minimal performance impact on higher network traffic volumes. -
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Anti-theft alarm sysem based on Arduino
This system works under 5V DC power supply, it can realize infrared en
...When press the reset button on the ICStation MEGA board, the buzzer stops alarming, the DIP LED lights again and this system continues monitoring. Components list: 1.1× ICStation ATMEGA2560 Mega2560 R3 Board Compatible Arduino http://www.icstation.com/product_info.php?products_id=3517 2.1×USB Cable A-B Male to Female USB A to UAB B 3m for Arduino 3.1×1K ohm 1/4W 1% Accuracy Metal Film Resistor 4.1×5mm Infrared Emitting LED 5. 1×5mm Infrared Receiving LED 6. 1×Active Buzzer Module for Arduino 7.1×5mm DIP Round White Red Superbright Bulb Light LED 8. 1×5V power supply 9.1× 830 Point Solderless PCB Bread Board MB-102 Test DIY -
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Command Utility to dump contents of ROOT files to terminal(file). Emulates many features of 'ls', but on a root file plus manyother useful methods. Supports asci drawing, wild-cards, histogram dumping, tree dumping/scanning, and more.
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BlueSky Open Air Traffic Simulator
BlueSky Open Air Traffic sim, (Windows/Linux/Mac, Python 2.x based)
...It includes only open, license free data for navigation and aircraft performance but is also compatible with BADA 3. Can be used for ATC research or any other aviation or air transport related simulation studies. Is also able to visualize ADS-B traffic. BlueSky commands, and thus the scenario files, are compatible with the TMX simulator in use by NLR and NASA. BlueSky is originally developed, and still moderated, by prof. Jacco M. Hoekstra and staff and students of the TU Delft. More documentation can be found at the website and inside the doc folder. -
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Decision Tree
ID3-based implementation of the ML Decision Tree algorithm
...Its Ruleset trainer converts a tree into pruned rules using a held-out portion of the training data. A bagging trainer builds ten rulesets and combines their predictions through voting. -
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RAREVATOR
Tool for the detection of variants in rare reference allele loci
RAREVATOR (RAre REference VAriant annotaTOR) is a tool for the identification and annotation of germline and somatic variants in rare reference allele loci from second generation sequencing data. RAREVATOR has been published on BMC Genomics. Magi A, D'Aurizio R, Palombo F, Cifola I, Tattini L, Semeraro R, Pippucci T, Giusti B, Romeo G, Abbate R, Gensini GF. Characterization and identification of hidden rare variants in the human genome. BMC Genomics. 2015 Apr 24;16:340. doi: 10.1186/s12864-015-1481-9. -
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Arch-WiPi
Turn your Raspberry Pi into a wireless router/AP
Project homepage: http://haydenjames.io/download-arch-linux-raspberry-pi-wifi-access-point-setup/ Change log 03-22-2015 – Added Raspberry Pi 2 support. 07-20-2014 - Monitorix optimized. 07-17-2014 - Stripped down and optimized Arch Linux even more. 07-17-2014 – Extended partition. There’s now 700MB of free disk vs 90MB previously. 07-17-2014 - 138 Packages updated using pacman -Syu. 07-17-2014 – Now Model B+ compatible. 01-26-2014 – Config changes to address random network drops. 01-25-2014 – Overclocking improvements. See /boot/config.txt for more aggressive overclocking options. 01-24-2014 – Stripped down and optimized Arch OS even more. Boots in less than 10 seconds. 01-23-2014 – Installed bcmstat.sh to replace cpustatus.sh see usage below 01-22-2014 – Changed root login password for Pi to: archlinux Arch-WiPi is a tiny downloadable Arch Linux image for your Raspberry Pi. -
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OVATION Prime
Seasonal model of the diffuse, monoenergetic, proton, and wave aurora.
...Documentation includes a model description and instructions for running the software. The README is available here: http://sourceforge.net/p/ovation-prime/code/HEAD/tree/trunk/README.pdf?format=raw A web interface for running the model for historical periods is available here: http://sd-www.jhuapl.edu/Aurora/ovation_prime/prime_display.html Realtime versions are running here: http://www.ngdc.noaa.gov/stp/ovation_prime/ http://www.swpc.noaa.gov/ovation/ -
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PyBreak360
breakout/arkanoid clone multiplayers network game at 360°!
...So, i made it: an arkanoid / breakout clone which have the particularity to play at 360°. pybreak360.cfg to fine configure outside game. pybreak360_kbd.py for special international keymap. on game, use mouse or arrow keys. press B to start/stop ComputerBootPlayer. press H to see HiScores. press D for LevelDesigner (see in levels/*.level to edit/create fine configured levels as BrickArray, Background, Music, ...) press PAGE_UP, PAGE_DOWN to change level in actual level pack. press SPACE or ENTER for menu. select level pack using menu/F9. play alone or connect up to 4 players via TCP network. ... -
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The library for utilization of Minimal Quadtree format for storing very large sparse matrices. Please see the paper referenced below for the description of a problem. Corresponding papers: Tree-based Space Efficient Formats for Storing the Structure of Sparse Matrices (I. Šimeček, D. Langr, P. Tvrdík), In Scalable Computing: Practice and Experience, volume 15, 2014. Space Efficient Formats for Structure of Sparse Matrices Based on Tree Structures (I. Šimeček, Daniel Langr, Pavel Tvrdík), In Proceedings of 15th International Symposium on Symbolic and Numeric Algorithms for Scientific Computing (SYNASC 2013), 2013. ...
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Ancestris
Java Extensible Genealogy program
...Ancestris is a genealogy software that closely respects the GEDCOM 5.5 standard which will allow you to work on files that are reliable and that you can exchange and share without losing data. In addition to the editors (Ancestris comes with two editors: a GEDCOM editor and a standard one), it offers many views like tree view, geographic view, chronological view, browsers, tables: individuals, families, etc.. and numerous reports. It offers an opportunity to expand its capabilities and adapt it to your needs and desires thanks to plugins. -
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tilers-tools
Scripts for raster tile sets from digital maps
...A family of scripts for creating and handling a tile sets from digital raster maps. The scripts are based on GDAL tools. gdal_tiler.py -- creates a tile set tree directory from a GDAL dataset (including BSB/KAP, GEO/NOS, OZI map, KML image overlays); tiles_merge.py -- sequentially merges a few tile sets in a single one to cover the area required; tiles_convert.py -- converts tile sets between a different tile structures: TMS, Google map-compatible (maemo mappero), SASPlanet cache, maemo-mapper sqlite3 and gmdb databases; ozf_decoder.py -- converts .ozf2 or .ozfx3 file into .tiff (tiled format) hdr_pcx_merge.py -- converts hdr-pcx chart image into .png -
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Orabra
3D tree generator
This project was designed as fork of Arbaro tree generator. But later it was totally rewritten since 1.0.7 version. Main goal is creating tree generator which can create tree modes to be used in computer games(low poly). -
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dep-trace
gdeptrace dependancy solver correct for pkg or make deps
...It's default operation is to act like tsort (1) except that it sorts by pure pkg / make dependancy (tsort sorts by grapical topology: see notes about differences). EXAMPLE: $ echo -e "b e\ne\nc b" | sort -k1,1 | gdeptrace [opts] e b c (b depends on e, c depends on b, e has no depends) (also: e has more items depending on it and is below anything it depends on; in this case the top, all and only by the rules known and given, in order by given where equal) $ echo -e "b e\ne\nc b" | depsort ditto, no opts needed $ libdeps objdump /lib/*.so.* (outputs if missing, load order (deps), rdeps, which are effected by missing lib/s, etc, see readme) $ doil (a package installer/solver like apt-get+dpkg which uses gdeptrace, see doil on Source Forge) dep-trace is now "gdeptrace" to ease packaging compatibility -
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JavaMacBuntu
Plug and play linux OS with macintosh design
...Remember, its totally FREE Download Link Here : http://content.wuala.com/contents/javanesse/javamacbuntu/JVMB-i686rev1.3.iso?dl=1 If You want to donate me, here my donating page http://www.supportunicef.org/site/c.dvKUI9OWInJ6H/b.7549291/k.BDF0/Home.htm -
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lccs
Longest Common Coding Subsequence algorithm
This is an implementation, in C++, of the Longest Common CDS Subsequence algorithm. Given two CDS (coding) sequences A and B, program will find the longest sequence of CDS that is common and ordered in A-B and B-A.
