Showing 888 open source projects for "data quality"

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  • 1
    An MDA(model driven architecture) tool to generate a complete web / mobile app from a UML model. Will generate high quality , best practices compliant code from UML model for all tiers of an enterprise application i.e. presentation, persistence, plumbing
    Downloads: 0 This Week
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  • 2

    coval

    Improving the quality of short read alignment data

    Coval is designed to minimize the incidence of spurious alignment of short reads, by filtering mismatched reads that remained in alignments after local realignment and error correction of mismatched reads, thereby increasing the calling accuracy of currently available tools for SNP and indel identification.
    Downloads: 2 This Week
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  • 3

    QA plugin for DITAOT

    DITA Open Toolkit plugin that creates an HTML QA error report

    This DITA Open Toolkit plugin identifies errors in DITA tagging, element nesting, language standards, and common syntax errors, many of which are based on the Microsoft Manual of Style for Technical Publications. The plugin produces a .dita file including all violation data, which is then rendered in HTML and .csv formats. Quality assurance checks are highly customizable to fit project needs.
    Downloads: 0 This Week
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  • 4
    VERDI is a flexible, efficient, and modular Java-based visualization software tool that is used to visualize multivariate four dimensional gridded environmental datasets such as those output by air quality models.
    Downloads: 0 This Week
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  • 5
    PROPER is a package for visual evaluation of ranking classifiers for biological big data mining studies in the mathematical language MATLAB. It is an efficient tool for optimization and comparison of the state-of-the-art ranking classifiers by generating over 20 different high quality two- and three-dimensional performance curves.
    Downloads: 0 This Week
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  • 6

    PRADA

    PRADA : Pipeline for RNA-Sequencing Data Analysis

    Massively parallel sequencing of cDNA reverse transcribed from RNA (RNASeq) provides an accurate estimate of the quantity and composition of mRNAs. To characterize the transcriptome through the analysis of RNA-seq data, we developed PRADA. PRADA focuses on the processing and analysis of gene expression estimates, supervised and unsupervised gene fusion identification, and supervised intragenic deletion identification. PRADA currently supports 7 modules to process and identify abnormalities from RNAseq data: preprocess: Generates aligned and recalibrated BAM files. ...
    Downloads: 0 This Week
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  • 7
    cutplace
    Cutplace validates tabular data (CSV, fixed format) according to an interface control document (ICD). The ICD acts as executable specification and can be described using popular spreadsheet applications (Calc, Excel).
    Downloads: 0 This Week
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  • 8
    MatStrat is a new open source Matlab toolbox that generates publication-quality stratigraphic plots and enables quantitative analysis of stratigraphic data.
    Downloads: 1 This Week
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  • 9
    AllianceROM I9305

    AllianceROM I9305

    AllianceROM For I9305 Samsung Galaxy S3 LTE

    Downloads: 0 This Week
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  • 10
    Aqsis Renderer
    Aqsis is a cross-platform 3D rendering solution adhering to the RenderMan standard defined by Pixar. Features include programmable shading, true displacements, 3D depth-of-field, motion blur, NURBS, subdivision surfaces, CSG, procedural plugins and m
    Downloads: 3 This Week
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  • 11
    QUASI is a toolkit to rapidly assess the quality of shRNA-Seq based data and call differential abundance using common statistical inference methods (DESeq, edgeR, baySeq).
    Downloads: 0 This Week
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  • 12
    UI To the Hadoop HBase Project
    Downloads: 0 This Week
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  • 13
    ExplorViz

    ExplorViz

    Live Trace Visualization for Large Software Landscapes

    ExplorViz is a web-based software visualization for large software landscapes. It features two different perspectives: the landscape-level perspective and the application-level perspective. The former visualizes the systems, nodes, and application existing in the software landscape. The latter one utilizes the city metaphor to visualize the entities and communication happening in one application. For installation instructions and downloads see http://www.explorviz.net
    Downloads: 0 This Week
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  • 14

    AFSM_seq

    a simple and rapid method for genome-wide SNP and methylation site

    Reference based analysis 1.Filter the raw reads obtained from Illumina Raw Data (paired-ends)according to your desired stringency, to produce a set of high-quality (HQ) sequences in fastq format. 2.Lignment reads (HQ, Fastq format) against Barcode file (Fasta format) using scanAP program. 3.Trim barcodes and filter paired-ends using trim_seq.pl. Classified paired-ends using fltfastq2pe.pl. to produce output “R1.trim.pair.fastq” and “R2.trim.pair.fastq”. 4.The filtered sequence reads were aligned to the reference genome using the Bowtie2, allowing a maximum of four mismatches and one gap of up to 3 bp. ...
    Downloads: 0 This Week
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  • 15
    YouTube Center

    YouTube Center

    Userscript designed to expand the functionality of YouTube

    YouTube Center is a userscript designed to expand the functionality of YouTube. It includes the ability to download the video you're watching, auto-selecting your preferred video quality and much more. YouTube Center is an extension for the browser that will enhance the experience on YouTube by adding tons of new and useful features. YouTube Center is a userscript designed to expand the functionality of YouTube. It includes the ability to download the video you're watching, auto selecting...
    Downloads: 4 This Week
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  • 16
    A quality assessment and quality control tool for Next-generation Sequencing data
    Downloads: 0 This Week
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  • 17
    Feed4JUnit makes it easy to write and feed parameterized JUnit tests with data imported from files (e.g. CSV or Excel) or generated.
    Downloads: 0 This Week
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  • 18

    Advanced Numerical Instruments 2D

    Advanced numerical instruments: adaptive meshing, FE methods, solvers

    Ani2D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers.
    Downloads: 1 This Week
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  • 19
    SvnStat

    SvnStat

    Subversion (SVN) Statistics

    SvnStat (Subversion Statistics) generates statistical reports with graphs and charts similar to StatCvs from Subversion (svn) logs.
    Downloads: 0 This Week
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  • 20

    xPyder PyMOL Plugin

    Analyze and visualize coupled residues and their networks in proteins

    xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level.
    Downloads: 0 This Week
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  • 21
    rseqflow

    rseqflow

    RNA-Seq analysis pipeline for QC, Expression, DifferentialExpression

    RseqFlow is an RNA-Seq analysis pipeline which offers an express implementation of analysis steps for RNA sequencing datasets. It can perform pre and post mapping quality control (QC) for sequencing data, calculate expression levels for uniquely mapped reads, identify differentially expressed genes, and convert file formats for ease of visualization. A detailed description of the pipeline] is given here: https://sourceforge.net/p/rseqflow/wiki/PipelineDescription RseqFlow offers two run mode options, a VM workflow managed with Pegasus and a unix run mode. ...
    Downloads: 0 This Week
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  • 22
    DB Sanity
    DB Sanity performs checks on a database for verifying data consistency and correctness of aplication deployments. It is invoked by command line and creates an HTML report with aggregated diagnostic summaries and listings of faulty database entries.
    Downloads: 0 This Week
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  • 23
    RatStim Data Parser
    The RatStim Data Parser takes in one or more CSV files (formatted in the predetermined rat ID/stimulus layout) and sorts them according to rat ID and stimulus value. The average values for each stimulus across all input files are output to a 'Master' Excel file, and the individual sorted entries are kept in an 'Intermediate' Excel file. This allows data to be examined at a higher level in the 'Master' file, while still allowing closr analysis of the organized data in the 'Intermediate' file. ...
    Downloads: 0 This Week
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  • 24
    XMLNuke

    XMLNuke

    A Web Development Framework focused on the Data

    == THIS PROJECT HAS MOVED TO https://github.com/byjg/xmlnuke == XMLNuke is a Web Development Framework focused on produce the data. You can to create applications very rich by producing natively XML or JSON and the Framework transforms this data to another formats including XHTML.
    Downloads: 0 This Week
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  • 25
    BIRT Report Designer

    BIRT Report Designer

    Open Source Reporting & Data Visualization Platform

    BIRT is an open source technology platform used to create data visualizations and reports that can be embedded into rich client and web applications. Developers who use BIRT Designer are able to access information from multiple data sources easily and quickly in order to create reports and applications with stunning data visualizations. Actuate now provides a free report server, BIRT iHub F-Type, to deploy BIRT content so developers don't have to build their own infrastructure. With a...
    Downloads: 1 This Week
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