Search Results for "python-bibtex"
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Showing 105 open source projects for "python-bibtex"
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AutoResearchClaw
Autonomous research from idea to paper. Chat an Idea. Get a Paper 🦞
AutoResearchClaw is an open-source framework designed to automatically generate full academic research papers from a single idea or topic. Built in Python, it orchestrates a multi-stage research pipeline that gathers literature, formulates hypotheses, runs experiments, analyzes results, and writes the final paper. The system retrieves real academic references from sources such as arXiv and Semantic Scholar to ensure credible citations. It can automatically generate code for experiments, run them in a sandbox environment, and analyze the results with statistical methods. ... -
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Concordia
Crowdsourcing platform for full text transcription and tagging
Concordia is a platform for crowdsourcing transcription and tagging of text in digitized images. It was developed by the Library of Congress so that volunteers of all backgrounds could transcribe and tag digitized images of manuscripts and typed materials from the Library’s collections that could not otherwise be done by optical character recognition. -
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Stanza
Stanford NLP Python library for many human languages
Stanza is a collection of accurate and efficient tools for the linguistic analysis of many human languages. Starting from raw text to syntactic analysis and entity recognition, Stanza brings state-of-the-art NLP models to languages of your choosing. Stanza is a Python natural language analysis package. It contains tools, which can be used in a pipeline, to convert a string containing human language text into lists of sentences and words, to generate base forms of those words, their parts of speech and morphological features, to give a syntactic structure dependency parse, and to recognize named entities. ... -
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Open Source Vizier
Python-based research interface for blackbox
Open Source (OSS) Vizier is a Python-based interface for blackbox optimization and research, based on Google’s original internal Vizier, one of the first hyperparameter tuning services designed to work at scale. Allows a user to setup an OSS Vizier Server, which can host black-box optimization algorithms to serve multiple clients simultaneously in a fault-tolerant manner to tune their objective functions. -
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nanoGPT
The simplest, fastest repository for training/finetuning models
NanoGPT is a minimalistic yet powerful reimplementation of GPT-style transformers created by Andrej Karpathy for educational and research use. It distills the GPT architecture into a few hundred lines of Python code, making it far easier to understand than large, production-scale implementations. The repo is organized with a training pipeline (dataset preprocessing, model definition, optimizer, training loop) and inference script so you can train a small GPT on text datasets like Shakespeare or custom corpora. It emphasizes readability and clarity: the training loop is cleanly written, and the code avoids heavy abstractions, letting students follow the architecture step by step. ... -
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Archivematica
Free and open-source digital preservation system
Archivematica is a web- and standards-based, open-source application which allows your institution to preserve long-term access to trustworthy, authentic, and reliable digital content. Our target users are archivists, librarians, and anyone working to preserve digital objects. You are free to copy, modify, and distribute Archivematica with attribution under the terms of the AGPLv3 license. Archivematica is an open-source application based on recognized standards that makes it possible to... -
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Megatron-LM
Ongoing research training transformer models at scale
Megatron-LM is a GPU-optimized deep learning framework from NVIDIA designed to train extremely large transformer-based language models efficiently at scale. The repository provides both a reference training implementation and Megatron Core, a composable library of high-performance building blocks for custom large-model pipelines. It supports advanced parallelism strategies including tensor, pipeline, data, expert, and context parallelism, enabling training across massive multi-GPU and... -
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AI Researcher
An autonomous AI researcher
AI Researcher is an experimental open-source project that demonstrates how multiple AI agents can collaborate to conduct complex research tasks from start to finish with minimal human intervention. It orchestrates agents that can generate research questions, perform literature reviews, execute experiments, analyze results, and synthesize findings into structured outputs like reports or code. Each agent operates with clear roles — such as researcher, analyst, and summarizer — and they... -
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Recommenders
Best practices on recommendation systems
The Recommenders repository provides examples and best practices for building recommendation systems, provided as Jupyter notebooks. The module reco_utils contains functions to simplify common tasks used when developing and evaluating recommender systems. Several utilities are provided in reco_utils to support common tasks such as loading datasets in the format expected by different algorithms, evaluating model outputs, and splitting training/test data. Implementations of several... -
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JSONLab
JSONLab: compact, portable, robust JSON/binary-JSON encoder
JSONLab is a free and open-source JSON/UBJSON/MessagePack encoder and decoder written in the native MATLAB language. It can be used to convert a MATLAB data structure (array, struct, cell, struct array, cell array, and objects) into JSON/UBJSON/MessagePack formatted strings and files, or to parse a JSON/UBJSON/MessagePack file into MATLAB data structure. JSONLab supports nearly all versions of MATLAB and GNU Octave (a free MATLAB clone). The development of JSONLab is currently funded by the... -
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refbase - Web Reference Database
Online bibliographic manager for research groups. Zotero-compatible.
refbase is a web-based bibliographic manager which can import and export references in various formats (including BibTeX, Endnote, MODS XML, and OpenOffice). It can make formatted lists of citations and offers powerful searching, rich metadata, and RSS. -
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WIKINDX
Virtual Research Environment / On-line Bibliography Manager
...Designed by academics for academics, under continuous development since 2003, and used by both individuals and major research institutions worldwide, WIKINDX is a Virtual Research Environment (an enhanced on-line bibliography manager) storing searchable references, notes, files, citations, ideas, and more. An integrated WYSIWYG word processor exports formatted articles to RTF and HTML. Plugins include a citation style editor and import/export of bibliographies (BibTeX, Endnote, RIS etc.). WIKINDX supports multiple attachments with each reference, multiple language localizations, and uses a template system to allow users to visually integrate WIKINDX into their sites. WIKINDX runs on a web server giving you and your research group ownership and global access from any web-enabled device. You manage your database, you own your data. ... -
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moebinv
C++ libraries for manipulations in non-Euclidean geometry
...The second library Figure operates on ensembles of cycles connected by Moebius-invariant relations, e.g. orthogonality. Both libraries are based on the Clifford algebra capacities of the GiNaC computer algebra system (http://ginac.de). Besides C++ libraries there is a Python wrapper, which can be used in interactive mode (https://codeocean.com/capsule/7952650/). Both libraries work in arbitrary dimensions and signatures of metric. Additionally, there are some 2D/3D-specific routines including a visualisation to PostScript files through Asymptote (http://asymptote.sourcefourge.net) software. The source is written in literate programming NoWeb. -
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xrayutilities
a package with useful scripts for X-ray diffraction physicists
xrayutilities is a python package used to analyze x-ray diffraction data. It can support with performing diffraction experiments and used for common steps in the data analysis. It can read experimental data from several data formats (spec, edf, xrdml, ...); convert them to reciprocal space for arbitrary goniometer geometries and different detector systems (point, linear as well as area detectors); for further processing the data can be gridded (transformed to a regular grid). ... -
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MathGL
A library for scientific data visualization
A free cross-platform library of fast C++ routines for the plotting of up to 3-ranged data. It can export to bitmap and vector EPS/SVG files. There are window interfaces (GLUT/FLTK/Qt) and console tools. MathGL can be used from C/Fortran/Python/Octav/Lua -
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Libro
An interactive program for statistical analysis of texts
A cross-platform text analysis program written in Python and Free Pascal/Lazarus which scans a whole text file (in plain text, HTML, EPUB, or ODT formats) and ranks all used words according to frequency, performing a quantitative analysis of the text using Shannon-Weaver information statistic and Zipf power law function. It counts words, sentences, chars, spaces, and syllables. Also computes readability indexes (Gunning-Fog, Coleman-Liau, Automated Readability Index (ARI), SMOG grade, Flesch–Kincaid grade level and Flesch Reading Ease). -
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Zettel
Zettel allows taking notes from several references and organizing them
Zettel is a program for taking notes from bibliographic references. Instead of marking the text on paper and then going crazy looking for where the copy ended up, the notes are saved in a database, linked to the reference from where they were copied. Notes can be tagged and retrieved in several ways. Zettel é um programa para fichamento de referências bibliográficas. Ao invés de marcar o texto em papel e depois enlouquecer procurando onde a cópia foi parar, as notas são guardadas numa... -
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ACORBA
Automated approach to measure root tip angles of Arabidopsis thaliana
Gravitropic response is studied in most of the laboratories working with Arabidopsis thaliana, for example, to detect new phenotypes in mutants. However, manual analysis of images and microscopy data are known to be subjected to human bias. This is particularly the case for manual measurements of root bending as the angle is set subjectively. In this context, it is essential to develop and use automated or semi-automated image analysis to produce faster, reproducible, and unbiased data. In... -
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DIG
A library for graph deep learning research
The key difference with current graph deep learning libraries, such as PyTorch Geometric (PyG) and Deep Graph Library (DGL), is that, while PyG and DGL support basic graph deep learning operations, DIG provides a unified testbed for higher level, research-oriented graph deep learning tasks, such as graph generation, self-supervised learning, explainability, 3D graphs, and graph out-of-distribution. If you are working or plan to work on research in graph deep learning, DIG enables you to... -
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Brain Tokyo Workshop
Experiments and code from Google Brain’s Tokyo research workshop
The Brain Tokyo Workshop repository hosts a collection of research materials and experimental code developed by the Google Brain team based in Tokyo. It showcases a variety of cutting-edge projects in artificial intelligence, particularly in the areas of neuroevolution, reinforcement learning, and model interpretability. Each project explores innovative approaches to learning, prediction, and creativity in neural networks, often through unconventional or biologically inspired methods. The... -
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Catalyst
Accelerated deep learning R&D
...Catalyst is focused on reproducibility, rapid experimentation, and codebase reuse so you can break the cycle of writing another regular train loop and make something totally new. Catalyst is compatible with Python 3.6+. PyTorch 1.1+, and has been tested on Ubuntu 16.04/18.04/20.04, macOS 10.15, Windows 10 and Windows Subsystem for Linux. It's part of the PyTorch Ecosystem, as well as the Catalyst Ecosystem which includes Alchemy (experiments logging & visualization) and Reaction (convenient deep learning models serving). -
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Zero Install is a decentralised cross-distribution software installation system. Create one package that works everywhere! With dependency handling and automatic updates, full support for shared libraries, and integration with native package managers
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Python/FEniCS Examples
phase-field simulation and other examples with Python/FEniCS
The main goal of this project was developing phase-field simulations of lithium dendrite growth with FEniCS programmed in Python. The problem was based in the grand potential-based model of Zijian Hong and Venkatasubramanian Viswanathan (https://doi.org/10.1021/acsenergylett.8b01009) . Some simpler examples were developed before for a first approach with FEniCS: heat equation and combustion model. -
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Ceka
Crowd Environment and its Knowledge Analysis
A knowledge analysis tool for crowdsourcing based on Weka. We also have a Python version of Crowdsourcing Learning: CrowdwiseKit on GitHub (https://github.com/tssai-lab/CrowdwiseKit). -
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GeoSolver
A Python library for solving geometric constraint problems
GeoSolver is a Python library for solving geometric constraint problems. A graphical testing and demostration application, the Geometric Constraint Workbench is included with the software.
