Search Results for "data visualization, research" - Page 4
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Showing 450 open source projects for "data visualization, research"
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Firecrawl MCP Server
Adds powerful web scraping and search to Cursor and Claude
...It exposes tools for single-page scrape, multi-URL batch jobs, site discovery, and search enrichment, returning cleaned, structured content suitable for downstream LLM reasoning. The server is designed to run with Firecrawl’s hosted API or self-hosted deployments, making it flexible for enterprise data-governance requirements. Built-in behaviors include JavaScript rendering, automatic retries, and streamable HTTP so long pages and large crawls can flow incrementally into agents. Because it’s an MCP server, clients get typed inputs/outputs and standardized error handling rather than ad-hoc prompt instructions. The repository is active, widely starred, and includes quick starts that make it easy to add web research to an agent stack. -
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PlateEditor
PlateEditor, a free web application to work with multi-well plates
PlateEditor is a free web application to work with multi-well plates, from creation of layouts to data visualization and aggregation. It is primarily designed as a tool to help scientists working in the field of biology to simplify and fasten the process of data analysis. It is fully client-side: files are never transferred to the server, ensuring complete security and privacy of research data. It doesn't require any installation. - PlateEditor is available at this address: https://plateeditor.sourceforge.io - The source code is also available on GitHub, visit: https://github.com/vindelorme/PlateEditor More information about the source code and the API are available there (the wiki is still under construction, thanks for your patience!) ... -
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Jmol
An interactive viewer for three-dimensional chemical structures.
Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other... -
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The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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miRge3
Comprehensive analysis of small RNA sequencing data
An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). ... -
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IIPImage
IIPImage is an advanced high-performance image server and client
IIPImage is a high performance image server and client for viewing, navigating and zooming within high resolution images on the internet. Images in TIFF or JPEG2000 format are efficiently streamed by the server to a choice of clients that can be embedded within a web page. -
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Suivi Conso Elec
Application Web de suivi conso. de compteur EDF
This project aims at recording and analysing home's electrical power consumption. -
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MyBox
Easy Tools of PDF, Image, File, Network, Data, and Medias
javafx-desktop-apps pdf image ocr icc barcode color-palette text bytes markdown html archive compress digest video audio editor converter media https://github.com/Mararsh/MyBox Self-contain packages need not java env nor installation. Jar packages need Java 16 or higher. -
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Mavo
Create web applications entirely by writing HTML and CSS
Create complex, reactive, persistent web applications by just writing HTML & CSS, without a single line of JavaScript and no server backend. Developed in the Haystack Group at MIT CSAIL and led by Lea Verou. Mavo extends the syntax of HTML to describe Web applications that manage, store, and transform data. Store data in the cloud, locally, or not at all by just changing an HTML attribute. Edit data right on the website, with an intuitive, auto-generated, customizable interface. No more wrestling with CMSes and servers! Multimedia uploads to your page via drag & drop, pasting, or browsing, without a single line of code. Perform calculations right in the HTML, that update when needed. ... -
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NeuroJSON
Scalable, searchable and verifiable neuroimaging data exchange platfor
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QXRD is software for the acquisition and analysis of X-ray data taken with 2 dimensional detectors. The software can drive a Perkin Elmer XRD series flat panel detector and can be remote-controlled via a socket interface, or directly from SPEC
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GeigerLog
Python program for Geiger counters and Environmental Sensors
GeigerLog is a combination of data logger, presenter, and analyzer, and is now released in version 2.1! Based on Python (Version 3), it runs on Linux, Windows, Macs, Raspberry Pi, and other. GeigerLog is WiFi-enabled for servers and clients; it can be monitored by SmartPhone. Initially developed for Geiger counters, it is now a more universal tool, which equally well handles data like temperature, air-pressure, humidity, CO2. Continues to support Geiger counters like GQ Electronic's... -
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treeminder
a free mind mapping tool, to especially assist decision making
I've been trying to develop an idea of a project, but the wide range of possibilities with all their outcomes, cons and pros and whatnot got my mind overloaded. There was no way I could keep or process that much information with my bare mind. So, I've checked the mind mapping tools available in the market, both free and commercial ones, yet they were either clunky or overkilling for my needs. Thus, I've made my own thing, and decided to share it with everyone who might find it useful for... -
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dashAI
dashAI: an interactive platform for training, evaluating and deploying
dashAI is an open-source, No-code workbench for Exploratory Data Analysis and classical ML. Visual data preparation, multi-model experiments, XAI explainability, and a plugin-based extensible catalog. The platform guides users through a complete, traceable workflow — data ingestion → visual exploration → preprocessing → model training → evaluation → explainability — without writing a single line of code. Each step is explicit and reversible, keeping the user in control rather than... -
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naval-qda
Local-first desktop app for qualitative data analysis (QDA)
NAVAL-QDA is a desktop application for qualitative data analysis (QDA). Import interview transcripts, documents, and media; code them against a hierarchical node tree; classify sources by case and attribute; write analytic memos; run text and coding queries; visualize patterns; and generate reports — all from a local Electron + React app. Key features: import .txt/.docx/.pdf plus audio/video for transcription; hierarchical coding with merge/move and percent-coded tracking; cases,... -
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8N1Term
High-speed serial terminal for embedded systems and protocol analysis
High-throughput serial capture without dropped data. Real-time plotting and visual inspection of incoming data. Combined ASCII / HEX views suitable for low-level debugging. Multi-window workflows for parallel monitoring. Cross-platform support (Windows, Linux). -
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Stud.IP ist ein Lern- und Informations-Management-System für Hochschulen, Bildungseinrichtungen und Unternehmen. Professioneller Support und Auftragsentwicklung wird durch data-quest (www.data-quest.de) angeboten.
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AMBIT:Chemical Structure DB&Web Service
Chemical structures database & machine learning with web services API
AMBIT offers a cheminformatics data management for chemical substances, structures and nanomaterials. Flexible structure, similarity and study queries storage, descriptor calculation and predictive models building via REST web services.User interface for creating read across assessment and generating reports, aligned with regulatory and industrial requirements. Command line applications also available. Integration with third party tools and databases. -
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Lithology Docker for CorelDraw
For the design of geological sections, illustrations
Telegram chat https://t.me/+cDV5ccIDOJ42OTc6 Telegram group https://t.me/+qvT9A2fX5-c5YWMy YouTube channel https://www.youtube.com/@finich1981 Lithology is a docker for CorelDRAW, which is designed to build geological sections, geological maps, and well mapping schemes. Installation You can use the installer, which is located in the setup folder Or install it manually from the archive in the zip folder There are two folders in the archive Lithology and... -
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Hirtius
A Historical Research Assistant
...Eventually, based on the information you stored in the application, and the links you created between the various data elements, Hirtius will also help you prepare the draft version of your scholarly papers. -
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open enventory
Electronic Laboratory Notebook, chemical inventory & more
Web-based Electronic Laboratory Notebook (ELN) with integrated Chemical Inventory by the group of Prof. Goossen (then TU Kaiserslautern, Germany), based on PHP 8+/MariaDB. Allows (sub-)structure search, reaction planning, management of spectra and literature. -
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OpenClinic GA
Open Source Integrated Hospital Information Management System
OpenClinic GA is an open source integrated hospital information management system covering management of administrative, financial, clinical, lab, x-ray, pharmacy, meals distribution and other data. Extensive statistical and reporting capabilities. OpenClinic GA and OpenClinic GMAO are owned by Frank Verbeke, MD, PhD at Post-Factum BV (https://www.post-factum.be) -
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DSpice
DSpice: Design and Simulation of Circuits using Spice
What is DSPICE? DSpice (Designing Circuits and Simulation by SPICE) is an open-source tool designed to streamline the modeling of analog components and the simulation of electronic circuits. It leverages ngspice (the open-source successor to the classic SPICE engine) as its core simulation backend. The main objectives and features of DSpice are: . Custom Modeling: Creating new SPICE models for various electrical components. . Symbol Design: Designing and managing custom schematic... -
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A web based Metadata Catalog Server for data description and discovery. Supports both generic and geospatial data discovery. It implements international standards (e.g. ISO19115/19139/19119, ISO19115-3, DCAT-AP, CSW 2.0, OGC API Records). It originates from the United Nations and is used by many governments as geoportal software. Active development and discussion takes place on GitHub and OSGeo Discourse. You can also connect directly with the companies supporting the...
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SCADA-LTS
A comprehensive Supervisory Control, Data Acquisition, and Execution
SCADA-LTS is an advanced FOSS, web-based, multi-platform environment designed to build your own Supervisory Control, Data Acquisition, and Management Execution Software - SCADA/MES. Its architecture provides a robust foundation for complex industrial automation and monitoring. Optimized for Smart Infrastructure, it is highly capable of managing industrial PV/BESS, Smart buildings, municipal Water networks or Wastewater treatment, ANPR telemetry, City-wide lighting, and other diverse data...