Search Results for "network miner"

An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans...

...TSMiner provides extensive interactive operations to help users explore the results of each module. For example, we made use of the tree structure map developed by the Dynamic Regulatory Events Miner (DREM) (Ernst et al. 2007) to show the time-specific TFs. And we developed an interactive network map to help users explore the time-specific regulatory networks.

PMM-Lab is an open-source extension to the Konstanz Information Miner (KNIME). It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public...

FoodProcess-Lab is an open-source extension to the Konstanz Information Miner (KNIME) and PMM-Lab. The purpose of this tool is to combine predictive microbial models with processes of the food and feed industries (e.g. breweries, dairy factories). This tool tracks the steps of a “food process-chain” to trace the growth or inactivation of microbial contaminants. Its intention is to help the food- and feed industry to monitor microbial development in production processes and public...

Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated....

NB: ONZE Miner has been renamed LaBB-CAT, and active support has been moved to another sourceforge project: http://labbcat.sourceforge.net ONZE Miner was a browser-based linguistics research tool that stores audio recordings and regular-expression searchable text transcripts of interviews. The search results, entire transcripts, and media, can be viewed or exported in a variety of format

The Deep Email Miner Application is a software solution for the multistaged analysis of an Email Corpus. Social network analysis and text mining techniques are connected to enable an in depth view into the underlying information. The self-executable Version 1.1 jar file will now run on Java 1.5 or higher. A Windows executable file of Version 1.1 is also provided in the Files section.