Search Results for "package" - Page 6
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Showing 746 open source projects for "package"
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1
BisSNP
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller
Now in Github: https://github.com/dnaase/Bis-tools/tree/master/Bis-SNP BisSNP is a package based on the Genome Analysis Toolkit (GATK) map-reduce framework for genotyping in bisulfite treated massively parallel sequencing (Bisulfite-seq, NOMe-seq and RRBS) on Illumina platform. It uses bayesian inference with either manually specified or automatically estimated methylation probabilities of different cytosine context(not only CpG, CHH, CHG in Bisulfite-seq, but also GCH et.al. in other bisulfite treated sequencing) to determine genotypes and methylation levels simultaneously. ... -
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DCP Setup Maker
Powerful cross-platform install builder
...v=dmF5Kyla7Hg Its intuitive UI and exceptional ease of use makes it very easy to build complex installers with large amounts of files. The whole process is done step by step through a wizard-like interface, filling in fields and setting up files to finally build your package. *Required: Java 1.6+ Powered by Java, IzPack, Apache Pivot, Apache Ant, Nuget, launch4j and Stax. Source code migrated to https://github.com/DevComPack/setupmaker -
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Mighty Maxims
Update your website with a random quotation.
Evolving into a collection of tools and applications designed to pipe inspirational thoughts into our life... every day! (NEW) 2021: Python Package @ https://pypi.org/project/MightyMaxims/ Screen savers, GUI collection points, and MOTD-style console applications. C#, C++, and Java. Some STDNOJ projects. -Now with SQLite Support! -
4
Format-Preserving Encryption
Format-Preserving Encryption Library for Java
...For more information see the README.txt and package-info.java files in the source. -
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5
WebService::UMLSKS::Similarity::Java
A measure of semantic relatedness between medical terms using Java
...The measure is applied to UMLS source vocabularies and is used to find relatedness between medical terms. This implementation uses same algorithm as WebService::UMLSKS::Similarity, a CPAN perl open source package. -
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REHUNT
REHUNT (Restriction Enzymes HUNTing)
REHUNT (Restriction Enzymes HUNTing) is a free and open source package implemented in JAVA for providing many useful methods for biological sequence analysis (especially in SNP genotyping) around restriction enzymes. All academic researchers are encouraged to use REHUNT in their studies or to integrate it into their systems and applications. Non-academic users or commercial needs are also welcome to use it. -
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Weather-Forecast
Weather Forecast is a simple app that shows you a weather.
...Furthermore, it delivers the basic weather information among with useful informations(Pressure clouds,Wind Speed) to your Windows computer in a clean, eye-catching and easy to use package together. -
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open-dis
Open-DIS implements the IEEE DIS protocol in multiple languages.
...Example applications including sending and receiving native DIS traffic, X-Plane plugin, and WebSocket/Javascript/WebGL applications. See the individual code directories for each package of interest. This project is inactive and has migrated to a GitHub project at https://github.com/open-dis -
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perftence
A fluent language to write perftences
Performance test engine written in Java and exposed as a fluent API for writing JUnit tests. Perftence can also be used without JUnit by using perftence-api distribution package. Full test results are provided in html, which can published directly with different CI's (e.g. Jenkins/Hudson). Runtime test statistics are also provided through logging (e.g. using slf4j-log4j and log4j). Pertence tool can also be used for finding out threading issues. Just write a test that uses the component you need to test for threading issues and assign load of threads to the test. ... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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AndroidChromium
Chrome browser of android version from chromium open project
...Native code in the chromium environment to build, as so file to join the Android project. Basic module (base, the content, net, etc.) in the chromium environment to build into a jar package, then add to the Android project. -
11
MOIRAI
Simple Scientific Workflow System for CAGE Analysis
...MOIRAI has a graphical interface allowing wet-lab researchers to create, modify and run analysis workflows. Embedded within the workflows are graphical quality control indicators allowing users assess data quality and to quickly spot potential problems. MOIRAI package comes with three main workflows allowing users to map, annotate and perform an expression analysis over multiple samples. -
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APDU for Java
Utilities for generating and parsing APDU commands
This package provides utilities for generating and parsing APDU commands and responses as specified in ISO/IEC 7816. These utilities may be useful for implementers of smart card readers, smart card tracers and debuggers, or smart card emulation (such as Android's Host Card Emulation, or HCE). -
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JavaFX Maven Plugin
Maven plugin for JavaFX
...This plugin is essentially a Maven wrapper for the packaging tool that comes with JavaFX, it's called Javapackager. The JavaFX Maven Plugin simplifies the integration of JavaFX applications with Maven, allowing developers to build and package JavaFX applications. -
14
CamBA is a Linux package for statistical analysis, by script/GUI, of neuroimaging data (fMRI/sMRI), developed at the Brain Mapping Unit, University of Cambridge. Non-parametric permutation-based statistics. Input images: 4D NiFTI files, output: HTML/
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JavaMutex
Provides 100% pure Java mutual exclusion.
Freely redistributable open source 100% pure Java for mutual exclusion. Read-write and read-only reentrant lock, condition variable, atomic wraps for Boolean, Integer, Long, and Reference. Cell pool with optional locking, object exchanger, Intersect. -
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epyunit
PyUnit and PyDev extensions for arbitrary Executables
The package 'epyunit' provides extensions for PyUnit and PyDev. * Extensions for PyUnit - Unittests for arbitrary executables. * Extensions for PyDev - Automation of search and load of pydevd.py The extensions are applicable from commandline and/or within Eclipse. Online manuals: - https://pythonhosted.org/epyunit/ PyPi repository: - https://pypi.python.org/pypi/epyunit Current application examples are: - bash-core - http://bash-core.sourceforge.net Nickname - Dromi https://en.wikipedia.org/wiki/Dromi -
17
NCMoney
A free alternative to MS Money
NCMoney (No Charge Money) is a JAVA project intended to create a free, open source, still complete solution to manage some bank accounts. 2.1.0 - 2.1.5 Get rid of log4j library. As a consequence, if you upgrade to this version: 1. you can remove the log4j.jar file and the log4j.properties file. 2. logger.properties now replaces the old log4j.properties 3. the .bat (windows users) and .command (Mac users) command line are updated accordingly. You don't have to do nothing if... -
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In the Oracle database there are two PL/SQL APIs to send mails: UTL_SMTP and UTL_MAIL. But there is no package which is able to retrieve messages from a mailbox on a server. The here provided package MAIL_CLIENT closes this gap.
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19
Disconf
Distributed configuration management platform
...Including Baidu, drops travel, CUP, Netease, pull hook net, Suning Tesco, SF science and technology and other well-known Internet companies are using! The deployment is extremely simple: the same launch package can be launched in multiple environments (RD/QA/PRODUCTION) without changing the configuration. Deployment dynamics, change the configuration without repackaging or restarting, it can take effect in real time. Unified management, provide a web platform to manage all configurations of multiple environments (RD/QA/PRODUCTION) and multiple products. -
20
OpenWm
Open webMethods utilities and tools
Open webMethods - some set of utilities and tools (like generic message interceptor based on InvokeManager) to help with integration development, package deployment, debugging, monitoring and maintenance using the farm of Software AG webMethods Integration Servers. There is also an improvement for webMethods Developer 8.2. Not finished yet, with a web UI not published yet. -
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Capsule
Dead-simple packaging and deployment for JVM apps
Capsule is a packaging and deployment tool for JVM applications. A capsule is a single executable JAR that contains everything your application needs to run either in the form of embedded files or as declarative metadata. It can contain your JAR artifacts, your dependencies and resources, native libraries, the require JRE version, the JVM flags required to run the application well, Java or native agents and more. In short, a capsule is a self-contained JAR that knows everything there is to... -
22
droid-lsystem
L-System java implementation with OpenGL ES viewer for android
Academic package implementation of free-context grammar L-System fractals which can be visualized inside Android 2.3 or later. -
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autoCode4
Synthesizing embedded control software from formal specifications
...The LTL specification captures the desired behavior of a controller where the environment takes the first move (i.e., sense/input then react/output), so the synthesized controller can be viewed as a Mealy machine. A step-by-step tutorial is available within the software package. -
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G4LTL-ST
Generating PLC programs from formal specifications
G4LTL-ST is a standalone tool and a Java library for automatically generating industrial control software (supporting IEC-61131-3 Structure Text) from LTL or extended logic specifications. See Tutorial.txt inside the package for step-by-step instructions. For technical demails, see CAV'14 paper "G4LTL-ST: Automatic Generation of PLC Programs". The old version (G4LTL; under BSD license) is available under file\arxiv. -
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GNU Hyperbole: The Everyday Info Manager
Create hyperlinks just by dragging, find contacts instantly, ...
GNU Hyperbole (pronounced Ga-new Hi-per-bo-lee), or just Hyperbole, is an amazing programmable hypertextual information management system implemented as a GNU Emacs package. This is the first public release in 2016. Hyperbole has been greatly expanded and modernized for use with the latest Emacs 25 releases; it supports GNU Emacs 24.4 or above. It contains an extensive set of improvements that can greatly boost your day-to-day productivity with Emacs and your ability to manage information stored across many different machines on the internet. ...
