Search Results for "command line" - Page 21
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Showing 2911 open source projects for "command line"
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Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters.
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OFormsCI
Continuous Integration for Oracle Forms/Reports Fusion Middleware
OFormsCI is a set of tools to form a complete tool chain for continuous integration with Git, Jenkins, Oracle Forms/Reports and WebLogic server. -
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Nodeclipse "Enide 2015"
Node.js & Java development in Eclipse-based IDE
Instructions 0. If you don't have, get latest Node.js http://www.nodejs.org/download/ 1. If you don't have, download & install latest JDK http://www.oracle.com/technetwork/java/javase/downloads/index.html For example "Java Platform (JDK) 7u21" 2. Download Node Tool Suite (NTS) for your operating system (currently only Windows x64 & MacOS x64) 3. Extract NTS.zip into folder where you keep our tools, e.g. D:\Progs\ 4. Open eclipse.exe from Eclipse folder, e.g.... -
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Informatica ExecuteWorkflow
A utility that uses Informatica Operations API
A Java utility that uses the Informatica Operations API allowing parameter inputs, trapping of suspended workflows and ability to send an email on failure. This utility extends the functionality of the pmcmd startworkflow and starttask command. If you pass in a parameter file and individual parameters on the command line, a temporary parameter file is created that has the values from the parameter file and appends the individual parameters. The e-mail sent is in HTML format using tables and looks similar to the workflow monitor output. -
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VarScan
Variant detection in next-generation sequencing data
Variant detection in massively parallel sequencing. For one sample, calls SNPs, indels, and consensus genotypes. For tumor-normal pairs, further classifies each variant as Germline, Somatic, or LOH, and also detects somatic copy number changes. THE LATEST VERSION IS AVAILABLE ON GITHUB -
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LogDistiller is a logfile merge and sort tool. Log content is classified according to rules configured in an XML file. Classification results go into reports, which are published : simply stored in a file, sent by mail, or even added to a news feed.
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Qwerty
Qwerty is an opensource remote administrator tool
Qwerty is a client-server application that allows to remote administer a computer. This includes features for file managing, video surveillance via webcam and desktop sharing. You can send remote commands, both predefined and custom from command line. We can obtain all the information on the machine, such as installed hardware and more. To develop this application was chosen Java because it is the programming language with which I have more experience, portability is also the basic requirement of this project, and thanks to the use of Java will be possible to administer a computer regardless of the system operating where you run the client or the server. ... -
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OpenAutonomy Demos
Demo code for use with OpenAutonomy
A grab-bag of demo programs and stand-alone tools meant to be connected to an OpenAutonomy identity via pre-trusted authentication tokens. -
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ChkSem
A static source code analyser for Fortran 90 and C++
ChkSem is a static Fortran 90 and C++ source code analyser. Fortran codes are analysed to find potential problems and dead code. This project allows ( for the moment ) to find useless includes and to find missing direct includes for helping programmers to clean C++ codes. This can potentially reduce building time from small programs to huge solutions. This tool is not finalized and new versions will follow, with a GUI with even more features. The project is written in Java to... -
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Java OCR is a suite of pure java libraries for image processing and character recognition. Small memory footprint and lack of external dependencies makes it suitable for android development. Provides modular structure for easier deployment
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Temperature Unit Converter
Temperature Unit Converter
...You can download .apk file from 'Files' section. (Or by visiting this page from your Android device) ---------------------------- A simple and useful GUI(Linux only) and command line program that lets you convert widely used temperature units to each other: Fahrenheit, Celsius and Kelvin. ------------------------------- Written by İ. Yuşa Çetin Using Python and gtk for GUI, C for algorithms and command line usage, Java for the Android version. ------------------------------------- This is still a Beta, so no one in the universe is responsible for anything happens :) I have it on my own computer and it's working properly. ... -
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JMCAD is an program for the modeling and simulation of complex dynamic systems. This includes the ability to construct and simulate block diagrams. The visual block diagram interface offers a simple method for constructing, modifying and maintaining complex system models. The simulation engine provides fast and accurate solutions for linear, nonlinear, continuous time, discrete time, time varying and hybrid system designs. With JMCAD, users can quickly develop software or "virtual"...
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StreamAID
A framework for prototyping and testing P2P live streaming algorithms
StreamAID facilitates fast prototyping of P2P live algorithms that can be built in a modular approach. -
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SINE Isochronic Entrainer
Free and Open Source Brainwave Entrainment application
SINE Isochronic Entrainer is a Free and Open Source Brainwave Entrainment application for PC, Android, and HTML5. Brainwave Entrainment is the practice of using sounds, visual stimuli or even electromagnetic fields to alter the frequency of brainwaves. It can be done for several reasons: people with insomnia can take great benefit from it, but it can also be used to improve your attention span, and even simulate the effects of some recreational drugs. The effect is not permanent, and... -
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An API for manipulating EDIF netlists in Java. We use this API to analyze netlists as a part of our FPGA reliability project. We intend to keep the API as general as possible to support other netlist analysis and manipulation activities. This material is based upon work supported by the National Science Foundation under Grant No. 0801876. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the...
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Protein Contact Matrix Generator
Command line application to generate contact matrix from proteins (3D)
A protein contact matrix is 2D representation of the distances between amino acid residues in a 3D protein structure. Protein Contact Map Generator (PCMGen) is a command line tool which takes protein 3D structures (PDB format files) as input and computes contact distances between two chains (from single or two different proteins). These matrix files can be further visualised as Contact Maps using other visualization tools/ programs (like R-heatmaps). Contact Maps can be used to understand proteins' : 1. ... -
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OpenTRV
Open-Source Thermostatic Radiator Valve
Retrofit completely-open reference mechanical/hardware/software design for zoned heating control not relying critically on any proprietary/hacked components. The aim is to include at least one complete mechanical and software design for a replacement TRV head that can be retrofitted without any plumbing plus at least one simple boiler control to allow end-to-end open soft heating zoning, with the ability to connect to home automation system or the Net if required. -
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Korat2015
Enhanced Korat supports GUI, FSM, JUNG and JSON.
Korat is a tool for constraint-based generation of structurally complex test inputs for Java programs. Please see http://korat.sourceforge.net/index.html for more information on the Korat application. Korat 2015 includes the below enhancements to Korat: - Graphical User Interface using Java Swing - Graph Output Format using JUNG (Java Universal Network/Graph Framework) - Finite State Machine Domain - Graph Archival using JSON (JavaScript Object Notation) The Wiki page has... -
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...The command line tools of Hadoop-BAM should be understandable to all users, but they are limited in scope. See the SeqPig project for a higher-level interface to the file formats supported by Hadoop-BAM: http://seqpig.sourceforge.net See Seal for Hadoop-based read alignment tools, Seal: http://biodoop-seal.sourceforge.net
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Ant-Ikvmc is an Ant task for IKVMC, a tool that converts Java bytecode to .NET dll's and exe's (available at www.ikvm.net). This library provides Ant interface to this tool. It also provides Java doclet to generate IKVMC mapping files from your sources
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JGAP is a Genetic Algorithms and Genetic Programming package written in Java. It is designed to require minimum effort to use, but is also designed to be highly modular. JGAP features grid functionality and a lot of examples. Many unit tests included. Legal notice/Impressum: Klaus Meffert An der Struth 25 D-65510 Idstein sourceforge <at> klausmeffert.de
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OSCAR - DOCSIS
OSCAR - OpenSource Cablemodem file AssembleR - DOCSIS
OSCAR is a Java-based CableLabs® Configuration File Builder API for DOCSIS®, PacketCable™, DPoE™, and DPoG™ Report Issues: https://github.com/Comcast/Oscar/issues Github Wiki: https://github.com/Comcast/Oscar/wiki -
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FenixSped
Integração com Webservers do Projeto Sped, NFSe e GNRE
Projeto inclui serviços da nota fiscal eletronica nacional, notas fiscais eletrônicas de serviços e GNRE. Pode ser utilizado como biblioteca com funções prontas ou chamar via linha de comandos para assinatura digital, validações e comunicações com webservices. NFe 3.10 NFSe Abrasf, DSF e ISS.NET GNRE-PE -
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