Search Results for "data mapping" - Page 2
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Showing 330 open source projects for "data mapping"
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BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. Please cite the BRIG paper if BRIG is used to generate figures for publications: NF Alikhan, NK Petty, NL Ben Zakour, SA Beatson (2011) BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons, BMC Genomics, 12:402. PMID: 21824423
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xsd2pgschema
Relational database replication tool based on XML Schema
xsd2pgschema is a Java application suite, which converts XML Schema 1.1 (hierarchical data model) to PostgreSQL DDL (relational data model) and supports XML data migration into PostgreSQL based on the XML Schema without defects on information content. It also supports full-text indexing via either Apache Lucene or Sphinx Search utilizing the relational data model. File conversion from XML to CSV, TSV, or JSON is possible as well as mapping XML Schema to JSON Schema. ... -
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A web based Metadata Catalog Server for data description and discovery. Supports both generic and geospatial data discovery. It implements international standards (e.g. ISO19115/19139/19119, ISO19115-3, DCAT-AP, CSW 2.0, OGC API Records). It originates from the United Nations and is used by many governments as geoportal software. Active development and discussion takes place on GitHub and OSGeo Discourse. You can also connect directly with the companies supporting the...
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UNICORE
UNiform Interface to COmputing and data REsources
UNICORE is a software suite for building federated systems, providing secure and seamless access to heterogeneous resource such as compute clusters and file systems. UNICORE deals with authentication, user mapping and authorization, and provides a comprehensive set of RESTful APIs for HPC access and workflows. Contributors: visit https://github.com/UNICORE-EU -
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DataNucleus
Java persistence using JDO, JPA or REST
DataNucleus provides Java data persistence to a range of datastores using JDO/JPA/REST APIs. *** Note that code development is no longer on SourceForge (code on SourceForge is for versions up to 3.3.5 only) *** -
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A free Java library and extensible framework for mapping, parsing and unmarshalling CSV file contents into Plain Old Java Objects. It provides Xdoclet support for easy and painless mapping of CSV records to Java Objects. The library requires J2SE 1.5
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NGSEP
NGSEP (Next Generation Sequencing Experience Platform)
NGSEP is an integrated framework for analysis of short and long DNA high throughput sequencing reads. The current version provides functionalities for both de-novo and reference guided analysis of sequencing data, including genome assembly, read mapping, variants detection and genotyping and de-novo analysis of data generated from reduced representation protocols. NGSEP also provides modules for analysis of genomic variation databases (VCF files), including functional annotation, filtering, format conversion, comparison, clustering, imputation, introgression analysis and different kinds of statistics. ... -
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grafx - Extensible Java Graphics Package
Extensible Line-drawing & Polygon-filling Rasterization Libs for Java
Line-drawing and polygon-filling rasterization algorithms in Java. Simple 2D package and more complex 3D package with Z-buffering. Texture mapping not supported at the moment. Color interpolation for lines, Gouraud shading for polygons fully supported. Floating point vertex coordinates, not integer. Pixel-level aliasing, not endpoint aliasing. Doesn't use Bresenham line style! Works with all Java versions. No external dependencies. Suitable for study in academic institutions,... -
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miRDeep*
MiRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
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Open Visual Traceroute
Open source cross-platform Java Visual Traceroute
Open source cross-platform (Windows/Linux/Mac) Java Visual Traceroute. Data is displayed in a 3D or a 2D map component. What is a traceroute? http://en.wikipedia.org/wiki/Traceroute If you need some help, please first check http://visualtraceroute.net/ Feel free to drop by and leave a comment on the Facebook page https://www.facebook.com/openvisualtraceroute Enjoy and share! If you want to support the development of this project, you can make a Paypal contribution at... -
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GETL
ETL engine based on Groovy
P.S. Dear friends. Repository migration to https://github.com/ascrus/getl . You can download jar file from this site or maven. GETL - based package in Groovy, which automates the work of loading and transforming data. His name is an acronym for «Groovy ETL». GETL is a set of libraries of pre-built classes and objects that can be used to solve problems unpacking, transform and load data into programs written in Groovy, or Java, as well as from any software that supports the work with... -
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WeIdentity is a set of distributed multi-center technical solutions that can carry the credible mapping of the actual identity and chain identity of the entity object (person or thing), as well as the realization of safe access authorization and data exchange between the entity objects. WeIdentity is independently developed and fully open source by the Microbank. It adheres to the concept of public alliance chains integrating resources, exchanging value, and serving the public. ...
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Java Marine API
NMEA 0183 library for Java
Java Marine API is an NMEA 0183 library for Java. For furher info and latest source code, see project's Github pages. http://github.com/ktuukkan/marine-api/ -
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i-Blue 747 / i-Blue 757 / Qstarz BT-Q1000 / i.Trek Z1 / Konet BGL-32 / Holux M-241 / ... control SW (for Java Phones, PalmOS, WinCe (PPC), Java platforms, Windows, Linux, and MacOS). Compatible with most MTK GPS Chipset based loggers.
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Fafnir-DB
Database file mapping names to records, implementing a file-system
Fafnir-DB is a database file, addressing variable record data through textual names as identifiers, which applies heap organisation of its data space (based on the Moelnir-file project). Fafnir-DB also implements a rudimentary file system (within the file). This operation modus is optional. There are no data size limits other than the range of a 64-bit signed integer. Scalability is limited to 1 - 10 Mio. entries due to non-paging internal structures. -
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Karto
Tool to work on map data, to check the data and generate your own maps
Karto allows to calibrate a scanned map (or aerial photos) with some known geo-points (Lambert, UTM, ...). After that, you can add any points (GPS points) in the map to build your own map. You can also add a transparent GIF image in the map after calibration (cave, mines, roads, ...). You can realize your own cartes with the data you add inside adding/showing/hiding layers of data. You can import/export your data files (after checking and correcting them) in differents formats. -
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OffRoad
Offline vector map display ported from OsmAnd
An offline map viewer for the Desktop based on OsmAnd. -
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The KFramework is the first integral SOFEA/SOUI framework for web based business applications using Domain Driven Design. The framework provides a web delivered SWING frontend and a WebServices based backend.
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Talend Spatial Module (aka Spatial Data Integrator or SDI) is an ETL tool for geospatial. Based on Talend Open Studio, input, output and transform geocomponents are available. IO components read/write GIS formats(eg.PostGIS, GeoRSS). Transformers all
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GPSdings (project name GPStools) is a set of free applications that let you manipulate and analyse GPS data from the command line.
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XML Editor/Validator/Designer with CAMV
CAM XML Editor for XML+JSON+Hibernate+SQL Open-XDX sponsored by Oracle
The CAM editor is the leading open source XML Editor/Validation/Schema toolset for rapidly building / deploying XML /JSON /Hibernate /SQL data /Forms applications. Visual WYSIWYG data design, rule entry wizards + drag & drop dictionary components. Will import, analyze / refactor from XML Schema / JSON. Oracle is a proud enterprise sponsor; with NIEM.gov support. Do SQL data import/map+ Open Data API delivery+ Hibernate JPA + UI Forms/Pencil Makes XSD schema (default, flatten, NIEM, &... -
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PrestoSQLite
Simple and powerful java ORM for sqlite database
PrestoSQLite is the best ORM for sqlite written in java. It can map database tables with EntityAdapter class, which you can use to build sql query or if you don't like handling sql language you can only use entity class which provides functions to read, save and delete data from tables (CRUD) . Also with SQLiteQueryAdapter you can read data using complex query statements without directly using the sql language. To finish using the SQLBuilder class you can have your query written to be used... -
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jarduino
Generates C++ code from Arduino .dbc files
jarduino creates C++ code from .dbc files suitable for import into the Arduino IDE. It generates C structures representing each message and functions to build and parse the messages. It also provides a visualisation of the message, mapping the signals to the bits in the data message. -
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greenDAO
Light ORM solution for Android that maps objects to SQLite databases
Android ORM for your SQLite database. For new apps we recommend ObjectBox, a new object-oriented database that is much faster than SQLite and easier to use. For existing apps based on greenDAO we offer DaoCompat for an easy switch (see also the announcement). greenDAO is an open source Android ORM making development for SQLite databases fun again. It relieves developers from dealing with low-level database requirements while saving development time. SQLite is an awesome embedded relational... -
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GPXParser
Java Library for working with gpx files
