Showing 6 open source projects for "requirements"

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  • 1
    ReViMS

    ReViMS

    ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy

    ...ReViMS is written in MATLAB (The MathWorks, Inc., Massachusetts, USA). It is an open-source tool and the source code is freely available at: http://sourceforge.net/p/revims Requirements: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions.
    Downloads: 3 This Week
    Last Update:
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  • 2
    ReViSP

    ReViSP

    ReViSP, a 3D volume rendering MATLAB tool for multicellular spheroids

    Reconstruction and Visualization from a Single Projection (ReViSP) tool: a 3D volume rendering method we developed to reconstruct the 3D shape of multicellular spheroids, besides estimating the volume by counting the voxels (3D pixels) fully included in the 3D surface. ReViSP is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements for running ReViSP from the source code: MATLAB 2020a and Image Processing Toolbox 11.1 or later versions. Please, when using this software, cite these articles: (a) F. Piccinini, et al., Cancer multicellular spheroids: Volume assessment from a single 2D projection. Computer Methods and Programs in Biomedicine, 118(2):95–106, 2015. ...
    Downloads: 1 This Week
    Last Update:
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  • 3
    ANDTool

    ANDTool

    Analysis Nuclei DAB (AND) Tool

    ...ANDTool is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code and standalone versions are here available for download. USER MANUAL: see the specific PDF available in the Files section. REQUIREMENTS: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions. MAIN CONTACT: Filippo Piccinini (E-mail: filippo.piccinini85@gmail.com)
    Downloads: 0 This Week
    Last Update:
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  • 4
    F-Tracker3D

    F-Tracker3D

    A software tool for tracking fluorescent cells in 3D

    ...Then, the 3D track of each cell is obtained analysing the z-stacks and looking for the z-plane with the maximum intensity value for the different x-y positions previously determined. F-Tracker3D is written in MATLAB (©, The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements: MATLAB 2015a and Image Processing Toolbox 9.2 or later versions.
    Downloads: 0 This Week
    Last Update:
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  • 5
    GridMos

    GridMos

    GridMos, mosaicing tool (in MATLAB) to improve cell counting.

    ...It is optimized to build the mosaic starting from a sequence of overlapping images previously acquired. The Graphical User Interface (GUI) implemented makes GridMos a very user-friendly software tool. Requirements: MATLAB 2009b (32-bit) and Image Processing Toolbox 8.1 or later versions.
    Downloads: 0 This Week
    Last Update:
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  • 6

    LBP in multiple platforms

    LBP implementation in multiple computing platforms (ARM,GPU, DSP...)

    The Local Binary Pattern (LBP) is a texture operator that is used in several different computer vision applications and implemented in a variety of platforms. When selecting a suitable LBP implementation platform, the specific application and its requirements in terms of performance, size, energy efficiency, cost and developing time has to be carefully considered. This is a software toolbox that collects software implementations of the Local Binary Pattern operator in several platforms: - OpenCL for CPU & GPU - OpenCL for GPU (branchless) - C code optimized for ARM - OpenGL ES 2.0 shaders mobile GPUs - C code for TI C64x DSP core (branchless) - C code for TTA processor synthesis If you use the code somewhere, please cite: Bordallo López M., Nieto A., Boutellier J., Hannuksela J., and Silvén O. ...
    Downloads: 0 This Week
    Last Update:
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