Open Source Python Healthcare Software
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Python Healthcare Software
View 5738 business solutionsBrowse free open source Python Healthcare Software and projects below. Use the toggles on the left to filter open source Python Healthcare Software by OS, license, language, programming language, and project status.
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Safe Eyes
Protect your eyes from eye strain using this simple break reminder
Safe Eyes is a Free and Open Source tool for Linux users to reduce and prevent repetitive strain injury (RSI). The whole purpose of Safe Eyes is to remind you to take breaks while working on the computer for a long time. The break screen asks you to do some exercises that will reduce your RSI. Strict break mode prevents computer addicts from skipping breaks unconsciously. In skip break mode, the user cannot skip or postpone the break. Workstations with dual monitors are cool to have but Safe Eyes locks all at the same time to relax your eyes during the break. Safe Eyes show a system notification before breaks and an audible alert at the end of breaks. Even if you are a few steps away from your computer, you can hear the call for back to work. If you are working with a fullscreen application, Safe Eyes will not bother you. It also can sense if your system is idle and postpone the break based on the idle period. -
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wger
Self hosted FLOSS fitness/workout, nutrition and weight tracker
wger Workout Manager is a free and open web application that manages your exercises, routines and nutrition. It started out as a personal project to replace my growing collection of spreadsheets but has turned into something that other people may find useful. You can create and manage flexible training routines for whatever goals you have. Select exactly what exercises you are going to do and how many repetitions, time or distance you want to do. You can also combine different workouts in the same program. Create your personal diet plan by creating as many meals with as many different ingredients as you need. The application will calculate the nutritional values (total energy, proteins, carbohydrates, etc.) of the entire plan and of each of the meals. Enter the weights and reps you've done for each exercise to generate diagrams that let you see at a glance how well you're doing. Of course, the raw numbers are still accessible. -
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OpenMed
Open source healthcare AI
OpenMed is an open-source healthcare AI and medical NLP toolkit designed to turn clinical text into structured insights using transformer-based models and production-oriented interfaces. Its core purpose is to provide specialized medical entity extraction, PII detection and de-identification, assertion-aware analysis, and related healthcare text processing capabilities without locking users into a proprietary platform. The project includes a curated registry of more than a dozen medical NER models focused on areas such as diseases, drugs, anatomy, genes, and protected health information, and it is built to support both research and deployment scenarios. OpenMed can be used in three main ways: as a simple Python API for scripts and notebooks, as a Docker-friendly FastAPI service for backend integration, and as a batch-processing system for multi-document workflows. -
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GNU Health
GNU Health - The Free/Libre Hospital and Health Information System
GNU Health is the award-winning Hospital and Health Information System (HIS), declared a Digital Public Good and adopted by the United Nations . GNU Health Hospital and Lab information system is used by academic and research institutions around the globe. It is also used in public health system of countries such as Argentina, India, Jamaica, Laos, Cameroon, Suriname. GNU Health is an official GNU project. GNU Health is brought to you by GNU Solidario, an Non-Profit Organization (NGO) that focuses in Social Medicine. -
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Open Wearables
Self-hosted platform to unify wearable health data
Open Wearables is an open-source initiative that aims to provide a community-driven ecosystem for wearable device software and interoperability by connecting sensor data, activity tracking, and health insights across multiple platforms and devices. Instead of relying on closed vendor ecosystems, the project provides standardized data models and APIs that let developers and hobbyists collect, sync, and analyze biometric and environmental data from wearables, DIY sensors, and open hardware projects. This approach allows users to break free from manufacturer lock-in while enabling richer, customizable dashboards, real-time visualizations, and personalized health analytics that match real-world needs rather than a one-size-fits-all model. It provides building blocks for federated data storage, modular device drivers, and plugin frameworks so contributions from different communities can extend capabilities without rewriting core logic. -
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corona
Reverse engineering SARS-CoV-2
corona is an exploratory bioinformatics project that applies reverse-engineering ideas to SARS-CoV-2. It treats biological information processing as an analogy to software analysis to help explain the viral genome from first principles. Python scripts download genomic sequences from GenBank and translate RNA into amino-acid chains. The project identifies and annotates proteins encoded by the genome. It also experiments with OpenMM for molecular simulation and protein-folding work. Supporting data, protein resources, vaccine-related material, research questions, and analysis notes make the repository a hands-on workspace for studying viral structure and genetics. -
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tika-python
Python binding to the Apache Tika™ REST services
A Python port of the Apache Tika library that makes Tika available using the Tika REST Server. This makes Apache Tika available as a Python library, installable via Setuptools, Pip and easy to install. To use this library, you need to have Java 7+ installed on your system as tika-python starts up the Tika REST server in the background. To get this working in a disconnected environment, download a tika server file (both tika-server.jar and tika-server.jar.md5, which can be found here) and set the TIKA_SERVER_JAR environment variable to TIKA_SERVER_JAR="file:////tika-server.jar" which successfully tells python-tika to "download" this file and move it to /tmp/tika-server.jar and run as a background process. This is the only way to run python-tika without internet access. Without this set, the default is to check the tika version and pull latest every time from Apache. -
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Face Mask Detection
Face Mask Detection system based on computer vision and deep learning
Face Mask Detection system based on computer vision and deep learning using OpenCV and Tensorflow/Keras. Face Mask Detection System built with OpenCV, Keras/TensorFlow using Deep Learning and Computer Vision concepts in order to detect face masks in static images as well as in real-time video streams. Amid the ongoing COVID-19 pandemic, there are no efficient face mask detection applications which are now in high demand for transportation means, densely populated areas, residential districts, large-scale manufacturers and other enterprises to ensure safety. The absence of large datasets of ‘with_mask’ images has made this task cumbersome and challenging. Our face mask detector doesn't use any morphed masked images dataset and the model is accurate. Owing to the use of MobileNetV2 architecture, it is computationally efficient, thus making it easier to deploy the model to embedded systems (Raspberry Pi, Google Coral, etc.). -
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Animal Clinic or Veterinary practice management. Stores and manipulates clients, animals, appointments, operations, medication, procedures. Generates bills, receipts and forms and tracks batch numbers. Fully network compatible.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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HealthFusion
AI Disease Detections System
HealthFusion has identified a critical business problem, which is the lack of accessibility and timely detection of multiple diseases. The traditional approach of detecting diseases is time-consuming, expensive, and not accessible to everyone, especially in remote areas. This problem can lead to delayed diagnosis and treatment, which can have serious consequences for patients. The proposed solution, HealthFusion, is novel and practical as it offers a comprehensive solution to detect multiple diseases using the power of AI. HealthFusion is a user-friendly app that can be accessed from the comfort of homes, making it accessible to everyone. The use of advanced technologies such as Convolutional Neural Networks, Random Forest, and XGBoost allows for accurate and timely detection of diseases, leading to better patient outcomes. -
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PsiNorm
A norm calculator for neuropsychological tests for daily use in clinic
Our premise when starting this project was that why do we have to dig through arrays of normative values to find the group our patient belongs to. Then proceed to manually calculate its z score and find out where it is on the percentile graph, when we could have a software that could do it for us. We weren’t able to find one in the literature. Thus came the PsiNorm. Currently only a demo for english exists, while Turkish adapted version is fully functional. If you'd like a version adapted to your patient population/language please contact us at Contact e-mail: psinormsoftware@gmail.com -
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Baby Buddy
Helps caregivers track sleep, feedings, diaper changes, and tummy time
A buddy for babies! Helps caregivers track sleep, feedings, diaper changes, tummy time and more to learn about and predict baby's needs without (as much) guesswork. A buddy to help caregivers track sleep, feedings, diaper changes, and tummy time to learn about and predict baby's needs without (as much) guess work. A demo of Baby Buddy is available on Heroku. The demo instance resets every hour. Baby Buddy is available in a variety of languages thanks to the efforts of numerous translators. Language can be set on a per-user basis from the user settings page (/user/settings/). -
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Conversational Health Agents (CHA)
A Personalized LLM-powered Agent Frameworks
CHA, or Conversational Health Agents, is an open-source framework designed to build intelligent healthcare assistants powered by large language models and external data sources. The system enables developers to create personalized AI agents that can interact with users through natural language while performing multi-step reasoning and task execution. It integrates orchestration capabilities that allow the agent to gather information from APIs, knowledge bases, and external services in order to generate more accurate and context-aware responses. The framework supports modular components such as planning, tool execution, and multimodal input processing, which makes it suitable for complex healthcare applications. It also includes a web-based interface for interacting with the agent, making it accessible for testing and deployment in real-world scenarios. -
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Application in Python for simple, paperless use of faxes. Speeds up usage of faxed documents (i.e. view them, make notes on them, print, and save the editted version somewhere). Has a GUI and will cooperate with pharmacy tracking software.
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FreePM is an opensource physicians practice management / electronic medical record application. The company providing support for FreePM nolonger exists. You may consider TORCH http://sourceforge.net/projects/op-torch/ or one of the other FOSS EMR's.
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GnuVet
Open Source Vet Practice Management
Veterinary Practice Management program for management, documentation, accounting etc. in the veterinary practice. Easy to use, intuitive structure. python + PyQt4, postgres database as storage engine. PRE-ALPHA! -
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ICDtools
Tools for ICD (International Classification of Diseases) data
Currently implemented: Python parser to import ICD10 XML data into a relational PostgreSQL database Sponsored by Ordium Biotechnology https://ordium.ai MIT License -
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OmicSelector
Feature selection and deep learning modeling for omic biomarker study
OmicSelector is an environment, Docker-based web application, and R package for biomarker signature selection (feature selection) from high-throughput experiments and others. It was initially developed for miRNA-seq (small RNA, smRNA-seq; hence the name was miRNAselector), RNA-seq and qPCR, but can be applied for every problem where numeric features should be selected to counteract overfitting of the models. Using our tool, you can choose features, like miRNAs, with the most significant diagnostic potential (based on the results of miRNA-seq, for validation in qPCR experiments). -
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The Open Source Health Information Platform is a Python implementation of openEHR electronic health record specifications http://www.openehr.org. Project website : http://launchpad.net/oship Analytics are at: http://www.ohloh.net/projects/oship
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Open Wearables
Unified API for 200+ wearables. Self-hosted, no fees.
Open-source, self-hosted health intelligence platform that unifies data from 200+ wearables into a single API. Built to democratize access to wearable data infrastructure that's typically locked behind enterprise contracts - deploy with docker-compose, own your data, no per-user fees. -
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OpenCarenet CHE
Enabling community health workers to collect health data efficiently
OpenCarenet CHE is a robust and user-friendly application tailored for community health workers, facilitating seamless data collection, management, and reporting. With its mobile data collection capabilities, offline functionality, and interoperability with DHIS2, the app empowers health professionals to efficiently track patient information, aggregate primary data, and generate detailed health reports, even in areas with limited internet access. Its multilingual support and configurable language settings enhance communication and usage in diverse cultural contexts, while features such as local patient management, transparent reference and geolocation functionalities contribute to improved patient care and holistic community health management. -
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SleepFM-Clinical
Improve human sleep through scientifically
SleepFM-Clinical is a specialized version of SleepFM designed for clinical and research environments, offering an adaptive audio modulation system aimed at improving human sleep through scientifically guided soundscapes. Rather than simply playing static white noise or ambient tracks, it uses a closed-loop, frequency-modulated framework that responds to user-specific sleep patterns and physiological signals to tailor sound in ways that can enhance sleep onset and depth. The clinical release includes additional features for controlled experimentation, such as logging capabilities, adjustable parameter sets, and protocols suitable for sleep studies and therapeutic settings. It also integrates tools for clinicians to configure sessions, annotate events, and potentially link with biofeedback data, enabling a more nuanced understanding of sound’s effect on sleep architecture over time. -
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Stock
Control de Stock
Sistema de control de stock para un laboratorio de análisis clínicos
