Search Results for "bio-bwa-files" - Page 2
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Showing 46 open source projects for "bio-bwa-files"
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Web Dictionary System. Extensible by uploading more dictionary files in XDXF format. Written in Grails. Using Compass-Lucene as the search engine. RESTful search. Compatible in Tomcat, Jetty, Weblogic ...
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This is a pipeline that is used to store an EST or Genome assembly information including reads and their alignment in a mysql database. Further more, it provides a set of scripts to mine SNPs and other statistics from the assembly.
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Needle is a simple dependency injection framework for configuring POJOs from properties files using annotations. Supports all numeric types, enums, arrays, collections and maps. Just drop into your classpath and never read a properties file again!
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Contextor is a light-weight simple-to-use Java based library to help developers and researchers working with the general concept of a resource; as examples, resources can be text resources, web resources, images and videos.
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Manage and protect your mobile workforce with AI-driven unified endpoint management (UEM)IBM® MaaS360® is uniquely equipped to help IT professionals manage a wide variety of endpoints, apps, and data, and protect them efficiently and productively.
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A multi-user password management web application designed for organizations to store passwords. Written in Grails, Groovy and Java.
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plausj a collection of checksum algorithms used to validate business keys like bank account codes or credit card numbers. It's compiled as JVM bytecode files (although it's not necessarily implemented in Java) and can be used on JRE 1.5 and later.
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This is a Gradle plugin for PDF files manipulation.The plugin is implementing a new task type is a pdftask. The pdftask will support some PDF actions: merge PDF documents; split PDF pages into a new document; rotate PDF pages or documents; and e.t.c.
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Glue Stick dependency injection framework is used for assembling and configuring Java applications from external bean definition and configuration files. There are several supported bean definition file formats, such as Groovy, JSON and Spring XML.
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A new way to share and backup own files. In fact, you login , upload files and if you want , you can create a share link about one or more files and send this link to your friends or put it on your web site.
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Manage your IT department more effectivelyConnectWise PSA (formerly Manage) allows you to stop working in separate systems, and helps you build a more profitable business. No more duplicate data entries, inefficient employees, manual invoices, and the inability to accurately track client service issues. Get a behind the scenes look into the award-winning PSA that automates processes for each area of business: sales, help desk, support, finance, and HR.
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This project is a java web application developer toolbox. It is among other, a simple and powerful framework which does not require dealing with XML files. It also provides a lot of other features, such as a DB abstraction layer, a nice javadoc doclet, a
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The GIS Metadata Manager is a simple Java-based desktop application to manage files from geographic information systems (GIS) in a specified directory by grouping files into records, adding metadata and searching the metadata to find files.
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Gnasher alleviates developers from having to execute maven builds with the "-o" option (offline) to avoid accessing external repositories metadata files. SHA1 hash files and the missing pom metadata files for dependencies are created if missing.
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The Swiss Protein Identification Toolbox (swissPIT) is a project at the Swiss Institute for Bioinformatics (SIB) in Geneva which aims at the development of an automated analysis system to identify proteins using MS and MS/MS based data.
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SETTLE (Seer Extract/Transform/Translate/Load Engine) This utility uses XML configuration files to define the flow of information from Data Sources to varioius Data Targets. XML is likewise used to define transformation rules in between. Transformation l
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Command line tool that can view multiple log files remotely and blend them into a single output based on the appropriate dates within the log files themselves. Has cat and tail modes available. Support for multiple local/remote protocols
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JControl is a small MVC framework built with Groovy and Velocity languages. It uses convention over configuration and makes no use of configuration files (i.e. like Struts or JSF do).
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ScriptBot is a scriptable IRC bot. Based on PircBot and BSF, it allows to fully customize the bot's behaviour by editing script files in the scripting language of your choice.
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A small library that provides a powerful and container-less Dependency-Injection mechanism, via AspectJ and Groovy. If you are tired of reams of XML configuration files, managing complex factories and containers, this non-API solution may appeal to you.
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Predictive Networks
Web application providing analysis of biomedical relationships.
Web application providing analysis of biomedical relationships. Built using the Grails web application framework (http://grails.org/) with MySQL (http://www.mysql.com/) as a back-end datastore and utilizing R (http://www.r-project.org/) for statistical analysis. Developed by the Dana Farber Cancer Institute (http://compbio.dfci.harvard.edu/) and Entagen (http://www.entagen.com). -
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This is a collection of tools for IEEE 1516 HLA FOM (FDD) files, including a fom-to-html converter with cross reference and minimal validation.
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SnipSnip, the SnipSnap based (http://snipsnap.org) improved wiki and blog software. This software is written in Java (JEE/*.jsp/Servlets), stores its contents in files or JDBC compliant data bases. Supports: weblog ping, RSS, XML-RPC, CSS, Themes, etc.