Search Results for "bio-bwa-files"

OmegaT is a free and open source multiplatform Computer Assisted Translation tool with fuzzy matching, translation memory, keyword search, glossaries, and translation leveraging into updated projects.

Snippetory is a platform for java developers dealing with any text generation. The abstraction layer helps to keep the issues of the 'view' in the view, while all logic is implemented in java. Editing, debugging and testing, all with the tools one is already used to. The separation of template keeps the template simple, the logic compact, and easy to navigate, and offers completely new re-usage scenarios. Sourceforge code hosting is abandoned. Primary site is now...

Metl is a simple, web-based ETL tool that allows for data integrations including database, files, messaging, and web services. Supports RDBMS, SOAP, HTTP, FTP, SFTP, XML, FIXLEN, CSV, JSON, ZIP, and more. Metl implements scheduled integration tasks without the need for custom coding or heavy infrastructure. It can be deployed in the cloud or in an internal data center, and it was built to allow developers to extend it with custom components.

Lilith is a logging and access event viewer for Logback, log4j & java.util.logging. It has features comparable to Chainsaw for log4j. This means that it can receive logging events from remote applications using Logback as their logging backend

JPPF makes it easy to parallelize computationally intensive tasks and execute them on a Grid.

I am often asked to start a new Selenium (http://seleniumhq.org/) test automation project. Reinventing the wheel each time sucks. Everything in this SF project are various tips & tricks that I figured out over time. Each of the files under net.sourceforge.sebase.demos is a proof of concept (POC) to get a different technology to work with Selenium.

A command line tool for text file analyis, filtering, splitting and reporting. Runs under Java (1.5+), supports plugins written in Groovy. Has nix and win batch files in distributions.

XTarget is an Groovy Library for automated editing of small XML Databases with Groovy scripts. It focuses on simultaneous editing of data, including structures like lists and maps, and linking between various XML files.

Needle is a simple dependency injection framework for configuring POJOs from properties files using annotations. Supports all numeric types, enums, arrays, collections and maps. Just drop into your classpath and never read a properties file again!

Contextor is a light-weight simple-to-use Java based library to help developers and researchers working with the general concept of a resource; as examples, resources can be text resources, web resources, images and videos.

plausj a collection of checksum algorithms used to validate business keys like bank account codes or credit card numbers. It's compiled as JVM bytecode files (although it's not necessarily implemented in Java) and can be used on JRE 1.5 and later.

Glue Stick dependency injection framework is used for assembling and configuring Java applications from external bean definition and configuration files. There are several supported bean definition file formats, such as Groovy, JSON and Spring XML.

This project is a java web application developer toolbox. It is among other, a simple and powerful framework which does not require dealing with XML files. It also provides a lot of other features, such as a DB abstraction layer, a nice javadoc doclet, a

Gnasher alleviates developers from having to execute maven builds with the "-o" option (offline) to avoid accessing external repositories metadata files. SHA1 hash files and the missing pom metadata files for dependencies are created if missing.

A small library that provides a powerful and container-less Dependency-Injection mechanism, via AspectJ and Groovy. If you are tired of reams of XML configuration files, managing complex factories and containers, this non-API solution may appeal to you.

Web application providing analysis of biomedical relationships. Built using the Grails web application framework (http://grails.org/) with MySQL (http://www.mysql.com/) as a back-end datastore and utilizing R (http://www.r-project.org/) for statistical analysis. Developed by the Dana Farber Cancer Institute (http://compbio.dfci.harvard.edu/) and Entagen (http://www.entagen.com).