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Showing 61 open source projects for "project"
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SMILI
Scientific Visualisation Made Easy
The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with... -
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Matplotlib
matplotlib: plotting with Python
...Matplotlib is the brainchild of John Hunter (1968-2012), who, along with its many contributors, have put an immeasurable amount of time and effort into producing a piece of software utilized by thousands of scientists worldwide. Matplotlib is a Sponsored Project of NumFOCUS, a 501(c)(3) nonprofit charity in the United States. Matplotlib has support for visualizing information with a wide array of colors and colormaps. -
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The Timeline Project
Cross-platform app for displaying and navigating events on a timeline.
The Timeline Project aims to create a free, cross-platform application for displaying and navigating events on a timeline. -
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leafmap
A Python package for interactive mapping and geospatial analysis
A Python package for geospatial analysis and interactive mapping in a Jupyter environment. Leafmap is a Python package for interactive mapping and geospatial analysis with minimal coding in a Jupyter environment. It is a spin-off project of the geemap Python package, which was designed specifically to work with Google Earth Engine (GEE). However, not everyone in the geospatial community has access to the GEE cloud computing platform. Leafmap is designed to fill this gap for non-GEE users. It is a free and open-source Python package that enables users to analyze and visualize geospatial data with minimal coding in a Jupyter environment, such as Google Colab, Jupyter Notebook, and JupyterLab. ... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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nb-clean
Clean Jupyter notebooks of outputs, metadata, and empty cells
...It can determine if a notebook is clean or not, which can be used as a check in your continuous integration pipelines. nb-clean can also be used as a pre-commit hook. You may prefer this to the Git filter if your project already uses the pre-commit framework. Note that the Git filter and pre-commit hook work differently, with different effects on your working directory. The pre-commit hook operates on the notebook on disk, cleaning the copy in your working directory. The Git filter cleans notebooks as they are added to the index, leaving the copy in your working directory dirty. -
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FreeImage is a library project for developers who would like to support popular graphics image formats (PNG, JPEG, TIFF, BMP and others). Some highlights are: extremely simple in use, not limited to the local PC (unique FreeImageIO) and Plugin driven!
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Mantid Project (www.mantidproject.org)
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This project delivers Linux support (USB driver and Tools) for a Digital Signal Processor (DSP) cards of the Signal Ranger series, see http://www.softdb.com/product_dsp.shtml for details) connected to a Linux host via USB.
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SBEVSL is a collaborative project between Dowling and RIT on the development of a Structural Biology Extensible Visualization Scripting Language, so that users can move freely among various molecular graphics tools, such as rasmol, pymol, raster3d, etc.
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Train ML Models With SQL You Already KnowBuild and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.
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hui
hewies user interface - 3D scientific visualisation tool
Python project with goal to provide FOSS library to extract, analyse and visualise data in a 3D fashion. The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS -
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Kale
Kubeflow’s superfood for Data Scientists
KALE (Kubeflow Automated pipeLines Engine) is a project that aims at simplifying the Data Science experience of deploying Kubeflow Pipelines workflows. Kubeflow is a great platform for orchestrating complex workflows on top Kubernetes and Kubeflow Pipeline provides the mean to create reusable components that can be executed as part of workflows. The self-service nature of Kubeflow make it extremely appealing for Data Science use, at it provides an easy access to advanced distributed jobs orchestration, re-usability of components, Jupyter Notebooks, rich UIs and more. ... -
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QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
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The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.
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Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
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VividSTORM
Correlated confocal and SMLM data visualization and analysis
...NOTE: If you encounter issues not addressed by the user guide, please contact by message on this site or via e-mail for additional support: vividstorm[at]koki.mta.hu If you find our software useful in your project, please cite: Correlated confocal and super-resolution imaging by VividSTORM Nature Protocols 11, 163–183 (2016) doi:10.1038/nprot.2016.002 -
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xmgrace python interface
xmgrace and qtgrace plotting interface in python
This is a python module providing a nearly complete interface to the graphing program xmgrace and the new qtgrace (great project... grace works under windows, too, now!). It allows creation of grace plots from within python, which can be customized using python, or through grace after creation. -
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Taurus
A python based User Interface library.
The Taurus Project has *moved* to: https://github.com/taurus-org/taurus This SourceForge page is *outdated* and kept for historical reference only. Taurus is a python framework for control and data acquisition CLIs and GUIs in scientific/industrial environments. It supports multiple control systems or data sources: Tango, EPICS, ... New control system libraries and data sources can be integrated through plugins. -
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Waterloo
Java-based scientific graphics
Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab. -
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The MeVisLab Community project provides add-on modules that extend the functionality of the MeVisLab software. The modules are provided and maintained by the MeVisLab developer community and can be compiled with the public MeVisLab SDK.
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TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological "parts". Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.
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Python Open Source Echosounder Toolkit
real-time visualization of network data broadcasts from echosounders
...Those who wish to participate in the development of pyOSET are encouraged to subscribe to the Developer's Mailing List. End users who want up to date information on the status of releases should periodically check the project News link above, or subscribe to the RSS feed of that page. -
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COV2HTML
A visualization and analysis tool of Bacterial NGS data for Biologists
COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS... -
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The CCP1GUI
An extensible GUI for computational chemistry codes
The CCP1GUI project aims to develop a free, extensible Graphical User Interface to various computational chemistry codes developed by the worldwide academic community, with an emphasis on ab initio Quantum Chemistry codes. -
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slycat
Web-based data science analysis and visualization platform.
This is Slycat - a web-based data science analysis and visualization platform, created at Sandia National Laboratories. The goal of the Slycat project is to develop processes, tools and techniques to support data science, particularly analysis of large, high-dimensional data. -
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Flightdeck-UI is a project that utilizes the ideas from the design of aircraft controls and instruments for creating computer user interfaces, such as for monitoring.
