Showing 8 open source projects for "note-taking"

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  • 1
    Bayesian Optimization

    Bayesian Optimization

    Python implementation of global optimization with gaussian processes

    This is a constrained global optimization package built upon bayesian inference and gaussian process, that attempts to find the maximum value of an unknown function in as few iterations as possible. This technique is particularly suited for optimization of high cost functions, situations where the balance between exploration and exploitation is important. More detailed information, other advanced features, and tips on usage/implementation can be found in the examples folder. Follow the basic...
    Downloads: 0 This Week
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  • 2
    nb-clean

    nb-clean

    Clean Jupyter notebooks of outputs, metadata, and empty cells

    ...It can determine if a notebook is clean or not, which can be used as a check in your continuous integration pipelines. nb-clean can also be used as a pre-commit hook. You may prefer this to the Git filter if your project already uses the pre-commit framework. Note that the Git filter and pre-commit hook work differently, with different effects on your working directory. The pre-commit hook operates on the notebook on disk, cleaning the copy in your working directory. The Git filter cleans notebooks as they are added to the index, leaving the copy in your working directory dirty.
    Downloads: 0 This Week
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  • 3
    TensorBoardX

    TensorBoardX

    tensorboard for pytorch (and chainer, mxnet, numpy, etc.)

    ...It adds a lot of functionality on top of tensorboard such as dataset management, diffing experiments, seeing the code that generated the results and more. Create special chart by collecting charts tags in ‘scalars’. Note that this function can only be called once for each SummaryWriter() object. Because it only provides metadata to tensorboard, the function can be called before or after the training loop.
    Downloads: 0 This Week
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  • 4
    GEOMS2

    GEOMS2

    Geostatistics and geosciences modeling software

    ...It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Petroleum.zip/download Download datasets for students of Geostatistics 2017 (Geology and Mining Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Mining.zip/download Old: http://sourceforge.net/projects/geoms2/files/SETS_geoestatistica2_2015.7z/download https://sites.google.com/site/cmrpsoftware/downloads/Quarry_sets.7z?...
    Downloads: 0 This Week
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  • 5
    PyMOL Molecular Graphics System

    PyMOL Molecular Graphics System

    PyMOL is an OpenGL based molecular visualization system

    The Open-Source PyMOL repository has been moved to github: https://github.com/schrodinger/pymol-open-source We still use the pymol-users mailing list here on sourceforge. Please subscribe for community support: https://pymol.org/maillist (Note: SourceForge email newsletter and special offers are optional and can be unchecked) The PyMOL community wiki has its own home: https://pymolwiki.org/
    Downloads: 54 This Week
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  • 6
    VividSTORM

    VividSTORM

    Correlated confocal and SMLM data visualization and analysis

    VividSTORM is a free and open-source standalone software with graphical user interface, for the correlated visualization and analysis of superresolution single molecule localization microscopy (SMLM) molecule lists and conventional pixel intensity-based images. The localization points (LPs) within this ROI can be analyzed using the selected built-in functions. NOTE: If you encounter issues not addressed by the user guide, please contact by message on this site or via e-mail for additional support: vividstorm[at]koki.mta.hu If you find our software useful in your project, please cite: Correlated confocal and super-resolution imaging by VividSTORM Nature Protocols 11, 163–183 (2016) doi:10.1038/nprot.2016.002
    Downloads: 0 This Week
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  • 7
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    ...It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs.
    Downloads: 0 This Week
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  • 8
    bitHull is a Simple unstructured data store-and-share mechanism. It is part experimental graph-based task/note/idea management system and part data aggregator.
    Downloads: 0 This Week
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