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An extensible GUI for computational chemistry codes
The CCP1GUI project aims to develop a free, extensible Graphical User Interface to various computational chemistry codes developed by the worldwide academic community, with an emphasis on ab initio Quantum Chemistry codes.
Toxmatch is a flexible and user-friendly open-source software application that encodes several chemical similarity indices to facilitate the grouping of chemicals into categories and read-across. The core functionalities include the ability to compare datasets based on various structural and descriptor-based similarity indices as well as the means to calculate pair wise similarity between compounds or aggregated similarity of a compound to a set.
Efficient and customizable TreeLayout Algorithm in Java, for NetBeans
Efficiently create compact, highly customizable tree layouts - Based on Walker's algorithm with enhancements suggested by Buchheim, Jünger, and Leipert the software builds tree layouts in linear time. I.e. even trees with many nodes are built fast.
Downloads are available at https://sourceforge.net/projects/treelayout/files/.
For detailed documentation look at the TreeLayout web site http://treelayout.sourceforge.net/.
Development for TreeLayout has moved to https://github.com/abego/treelayout/.
A treemap visualization java library, to implement Shneiderman's treemap easily (http://www.cs.umd.edu/hcil/treemaps/). Shows efficiently tree data as a rectangle colored map. Usefull to monitor thousand of files in a little window.
By using a neural net from neuroph.org with the programmlanguage Java, you can change the net by this software.
Easy watch it on the screen and move the values up or down. More or less value at the output neurons.
Saving, Loading from different .nnet`s.
Adding comments.
Changing the visible output neuron
Setting wished input neurons to get visible.
A small fast and easy weight version and a continuing version, which should get involved in the neuroph project.
Tunelator processes tunnel profile data for surveying work. It provides a powerfull grid editor, 3D preview, export to Prowin, Ispol, MDT and DXF (2D and 3D views with convenient layering).
VERDI is a flexible, efficient, and modular Java-based visualization software tool that is used to visualize multivariate four dimensional gridded environmental datasets such as those output by air quality models.
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This is a very simple OpenGL visualization library with a 3D and 4D volume renderer. It can easily be reused in other projects (e.g. with medical volumes). It is just perfect for learning or great if you like to hack your own code.
This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.
equal III is an equation visualization tool. It's possible to graph f(x,y) = 0. So it is able to graph systems of equations and inequations, and do graphic change analysis.
The main scope of the program is to take Thermo-Calc or Dictra (both registered trademarks) and transform them into nicely formatted encapsulated postscript diagrams, generated by gnuplot. But exp2plt can also be used as a graphical interface to gnuplot.
A Matlab toolbox for geostatistical modelling, prediction and simulation. It contains native matlab algorithms, and interfaces to SGeMS, GSTAT and VISIM.
MatNMR is a highly flexible toolbox for processing 1D and 2D NMR/EPR spectra in MATLAB and creating high-quality 1D, 2D or 3D plots. Fully GUI and/or script-based.
msgnet is a library that implements a simulation framework with visualisation for message passing networks.
This might be useful for teachers and students of distributed systems courses.
pyLastFM graph is commandline tool for creating a nice looking graph time graph from Last.fm profile data. It uses the audioscrobbler.net XML interface and can create very high resolution output images.
AquaTerm is a Mac OS X grahics renderer. It allows command line applications written in ObjC, C, FORTRAN, Lisp, Perl or Python to display vector graphics, text and images using a simple API. Adapters for gnuplot, PGPLOT, and PLplot exists as well.
This course aims to cover state-of-the-art methods in modern parallel Graphical Processing Unit (GPU) computing, supercomputing and code development with applications to natural sciences and engineering.