Open Source Java Data Visualization Software - Page 11

DiscriAlign implements a novel algorithm that aligns a set of biological interaction networks.It identifies both functionally conserved and dissimilar regions.

The goal of DynaQ is to develop an inquiry system to explore the personal information space, supporting you with the searching paradigm 'orienteering'. DynaQ is a (desktop)search engine with enhanced functionality for file, email and blog search. Look at our GitLab homepage for sourcecode and documentation: http://dynaq.opendfki.de

Dynagraph for Grappa is a Java front-end for the Dynagraph graph layout engines. It supports direct manipulation (graphical editing) of graphs, as well as text-driven display of dynamic graphs.

E-learning Miner, formerly DŽEMUj is a tool for data mining from e-learning data. Aimed for teachers.

Symbian 3D Engine Open Source - The EPOC Community Premier 3D Development

EpsGraphics is a Java library to output EPS graphics. EpsGraphics is an extension of Graphics2D that allows you to draw to an EPS file as it was a Java graphics object. CMYK as well as RGB color models are supported.

EZ-Access is an audit tool verifying website conformance to the WCAG 1.0 guidelines and acting as a visual deficiency simulator (color blindness, blurred vision,...), enabling web developers to find accessibility issues.

Effectopedia is open knowledge aggregation and collaboration tool that provides a means of describing adverse outcome pathways in encyclopedic manner.

Eidola is a representation-independent programming language. This project supports the language core, including the semantics and the reference implementation of a kernel. See http://eidola.org/ for for information.

ECG is a distributed system to record and analyse developer activites for programming behaviour. It supports the research of actual processes and micro-processes.

An Enclosure+Connection technique for layout and navigation of Hierarchical Information. The layout uses rectangular enclosure partitioning to ensure the space efficiency, and the navigation is a focus+context navigation technique using semi-transparency approach. Related Publications: https://opus.lib.uts.edu.au/bitstream/10453/4003/3/2005003228.pdf

The goal of this project is to implement a graph layout / network visualization algorithm as a Java plugin for Cytoscape (http://cytoscape.org/), using a recently published relative entropy optimization based method, called Unified Data Representation (Kovács IA et al. Sci Rep. 2015). If you are using the plugin, please cite: Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks, Bioinformatics 35(21):4490-4492 https://academic.oup.com/bioinformatics/article/35/21/4490/5475596 Our detailed Tutorial on the use of the plugin: https://suopte.com/entopt_2_1_tutorial_20200518.pdf A video about the version 2.1: http://suopte.com/entopt_2_1_tutorial_video.mp4 Don't hesitate to send any questions, comments or bug reports also to agg.bence {at} med.semmelweis-univ.hu.

Development of a snazzy Java program to simulate the growth and competition of entities in a limited environment.

Entrance is the MySQL browser with charts and tools for data exploration. Requires JRE 1.5. Visit our new web site, http://dbentrance.com/, for more details.

A tool providing a collection of methods for probability elicitation.

Euklid is a program to analyse and simulate geometric shapes interactively in 2 and 3 dimensions.

The EventStream Experimenter Workbench is a data collection framework with integrated visualization techniques to facilitate eye tracking research. The software currently supports the ASL eye trackers.

Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations. PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.

Java package to study a clustering model described in the paper \"Novel Clustering Algorithm Based Upon Games on Evolving Network\" by Q. Li, Z. Chen, Y. He and J-P. Jiang (in arxiv: http://arxiv.org/pdf/0812.5064v1), generalizations and similar issues.

ExplorViz is a web-based software visualization for large software landscapes. It features two different perspectives: the landscape-level perspective and the application-level perspective. The former visualizes the systems, nodes, and application existing in the software landscape. The latter one utilizes the city metaphor to visualize the entities and communication happening in one application. For installation instructions and downloads see http://www.explorviz.net

Exporter - A database and dataminig tool (coded in Java)

Prototype for a framework and user interface for combining various structured search and document clustering techniques.

An extensible TIFF codec for Java 1.2 Advanced Imaging, allowing for extended compression types, writing tiled images etc. Used by GeoTIFF-JAI project.

EyesRay render a 3D scene with the raytracing algorithm. Some specifics points are: a scene loader, the support of transparency, avaibility to generate images (ppm format)...

The FAKE GAME tool uses natural evolution to evolve Data Mining models. It incorporates several preprocessing, optimization and visualization methods aimed to streamline the Knowledge Discovery process. Knowledge Extraction from data is being automated!