jchart2d is a real-time charting library written in java.
Live Trace Visualization for Large Software Landscapes
An extensible GUI for computational chemistry codes
XNBC is a graphic application to simulate biologic neural networks.
Scenario Editing and Visualization tool for Scientific scenes
cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization
Java-based sonification data analysis
DSOL: A Distributed Simulation Object Library implemented in Java
Converts value change dump files to a plain-text table.
Alignments in Rotating Cylinder / 3D