Showing 417 open source projects for "pam-python"

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  • 1
    MMdnn

    MMdnn

    Tools to help users inter-operate among deep learning frameworks

    MMdnn is a set of tools to help users inter-operate among different deep learning frameworks. E.g. model conversion and visualization. Convert models between Caffe, Keras, MXNet, Tensorflow, CNTK, PyTorch Onnx and CoreML. MMdnn is a comprehensive and cross-framework tool to convert, visualize and diagnose deep learning (DL) models. The "MM" stands for model management, and "dnn" is the acronym of deep neural network. We implement a universal converter to convert DL models between frameworks,...
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  • 2
    repo2docker GitHub Action

    repo2docker GitHub Action

    A GitHub action to build data science environment images

    Trigger repo2docker to build a Jupyter enabled Docker image from your GitHub repository and push this image to a Docker registry of your choice. This will automatically attempt to build an environment from configuration files found in your repository. Images generated by this action are automatically tagged with both latest and <SHA> corresponding to the relevant commit SHA on GitHub. Both tags are pushed to the Docker registry specified by the user. If an existing image with the latest tag...
    Downloads: 0 This Week
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  • 3
    StellarGraph

    StellarGraph

    Machine Learning on Graphs

    StellarGraph is a Python library for machine learning on graphs and networks. The StellarGraph library offers state-of-the-art algorithms for graph machine learning, making it easy to discover patterns and answer questions about graph-structured data. It can solve many machine learning tasks. Graph-structured data represent entities as nodes (or vertices) and relationships between them as edges (or links), and can include data associated with either as attributes.
    Downloads: 0 This Week
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  • 4
    QtiPlot
    QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
    Downloads: 38 This Week
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  • 5
    An Open Source IEC 61131-3 Integrated Development Environment, providing PLCOpen SoftPLC programming, CanOpen IO's, and SVG based HMI.
    Downloads: 0 This Week
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  • 6
    The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.
    Downloads: 0 This Week
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  • 7
    MCNPydE

    MCNPydE

    MCNP data extraction and display software library

    MCNPydE is a Python library for extracting data from MCNP output file. It requires Python, Matplotlib and Numpy. It is a data reduction tool for MCNP output for ease of results analysis and viewing.
    Downloads: 0 This Week
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  • 8
    NCVTK: A VTK-based tool to visualize data stored in the NetCDF file format.
    Downloads: 0 This Week
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  • 9
    Inviwo

    Inviwo

    Interactive Visualization Workshop

    Inviwo is a modern, open-source visualization framework designed for interactive visual data analysis and scientific computing. Built in C++ with a modular, extensible architecture, Inviwo combines a visual editor (for creating data pipelines) with a powerful runtime engine that supports real-time rendering, interaction, and GPU-accelerated processing. It’s widely used in scientific domains for building and sharing visualizations of complex data such as medical imaging, simulations, and...
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  • 10
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
    Downloads: 0 This Week
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  • 11
    GEOMS2

    GEOMS2

    Geostatistics and geosciences modeling software

    GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Petroleum.zip/download Download datasets for students of Geostatistics 2017 (Geology and Mining Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Mining.zip/download Old: http://sourceforge.net/projects/geoms2/files/SETS_geoestatistica2_2015.7z/download https://sites.google.com/site/cmrpsoftware/downloads/Quarry_sets.7z?...
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    Downloads: 15 This Week
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  • 12
    PyMOL Molecular Graphics System

    PyMOL Molecular Graphics System

    PyMOL is an OpenGL based molecular visualization system

    The Open-Source PyMOL repository has been moved to github: https://github.com/schrodinger/pymol-open-source We still use the pymol-users mailing list here on sourceforge. Please subscribe for community support: https://pymol.org/maillist (Note: SourceForge email newsletter and special offers are optional and can be unchecked) The PyMOL community wiki has its own home: https://pymolwiki.org/
    Downloads: 54 This Week
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  • 13
    pyspread

    pyspread

    Python spreadsheet application

    Pyspread is a non-traditional spreadsheet application that is based on and written in the programming language Python. The goal of pyspread is to be the most pythonic spreadsheet. Pyspread expects Python expressions in its grid cells, which makes a spreadsheet specific language obsolete. Each cell returns a Python object that can be accessed from other cells. These objects can represent anything including lists or matrices. Dependencies + Python (>=2.7, <3.0) + numpy (>=1.1.0) + wxPython (>=2.8.10.1, Unicode version required) + matplotlib (>=1.1.1) + pycairo (>=1.8.8) Optional dependencies + python-gnupg (>=0.3.0, for opening own files without approval) + xlrd (>=0.9.2, for loading Excel® files) + xlwt (>=0.9.2, for saving Excel files, pyspread >=v0.3.0 required) + jedi (>=0.8.0, for tab completion and context help in the entry line, pyspread >=v0.3.0 required) + basemap (>=1.0.7, for the weather example pys file)
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  • 14
    VividSTORM

    VividSTORM

    Correlated confocal and SMLM data visualization and analysis

    VividSTORM is a free and open-source standalone software with graphical user interface, for the correlated visualization and analysis of superresolution single molecule localization microscopy (SMLM) molecule lists and conventional pixel intensity-based images. The localization points (LPs) within this ROI can be analyzed using the selected built-in functions. NOTE: If you encounter issues not addressed by the user guide, please contact by message on this site or via e-mail for...
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  • 15

    TimingDrawer

    Text based timing diagram generator

    ...It reads the description from a text file with a simple syntax. It generates vector graphic (EPS, SVG or EMF format). It can be used in command line mode or with a GUI. It is written in Python and works on any platform.
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  • 16

    Marine Mammal Acoustic DCL

    Advanced acoustic detection, classification and localization

    Advanced detection, classification and localization (DCL) of marine mammals and passive acoustic monitoring (PAM). Code is being developed as Matlab routines, interfaces for Ishmael (http://www.bioacoustics.us/ishmael.html), and in other formats.
    Downloads: 0 This Week
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  • 17
    PyTom

    PyTom

    http://www.sciencedirect.com/science/article/pii/S1047847711003492

    PyTom is a toolbox developed for interpreting cryo electron tomography data. All steps from reconstruction, localization, alignment and classification are covered with standard and improved methods. Please sign up to our mailing list to keep up with the most recent updates and versions.
    Downloads: 0 This Week
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  • 18

    xmgrace python interface

    xmgrace and qtgrace plotting interface in python

    This is a python module providing a nearly complete interface to the graphing program xmgrace and the new qtgrace (great project... grace works under windows, too, now!). It allows creation of grace plots from within python, which can be customized using python, or through grace after creation.
    Downloads: 5 This Week
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  • 19
    SpacePy
    Now maintained at github.com/spacepy/spacepy Space Science library for Python - contains superposed epoch classes, drift shell tracing, access to magnetic field models, streamline tracing, bootstrap confidence limits, time and coordinate conversions, etc.
    Downloads: 2 This Week
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    Downloads: 0 This Week
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  • 21
    PyX is a Python package for the creation of EPS, PS, PDF and SVG files. It combines an abstraction of the PostScript drawing model with a TeX/LaTeX interface. Complex tasks like 2d and 3d plots in publication-ready quality are built out of these primitives.
    Downloads: 0 This Week
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  • 22
    GDL - GNU Data Language, a free IDL (Interactive Data Language, see http://ittvis.com/idl/) compatible incremental compiler.
    Downloads: 1 This Week
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  • 23
    Clustergrammer

    Clustergrammer

    An interactive heatmap visualization built using D3.js

    ...Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end (Clustergrammer-PY) is built using Python. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several biology-specific features (e.g. enrichment analysis, see Biology-Specific Features) to facilitate the exploration of gene-level biological data.
    Downloads: 0 This Week
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  • 24
    AnyWave is a multi-platform software designed for neurologists and researchers who want to visualise and apply signal processing on electrophysiological signals. AnyWave can handle EEG, SEEG, MEG and more. MATLAB/Python/C++ plugins can be added. See this wiki section to learn how to build AnyWave on Linux : http://meg.univ-amu.fr/wiki/AnyWave:BuildSDK
    Downloads: 9 This Week
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  • 25

    ELINT Alchemist

    Plot, analyse and measure ELINT Time-Based data.

    This program will open an ELINT Time-Based Data (TBD) file and plot it for purposes of measurement and analysis. Test files included. New ver 0.4 added 2018-01-01.
    Downloads: 0 This Week
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