Showing 3229 open source projects for "data visualization, research"

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  • 1

    ITK-SNAP x64

    ITK-SNAP static builds for Windows 64-bit(only one file)

    ITK-SNAP is a software application used to segment structures in 3D medical images. It is the product of a decade-long collaboration between Paul Yushkevich, Ph.D., of the Penn Image Computing and Science Laboratory (PICSL) at the University of Pennsylvania, and Guido Gerig, Ph.D., of the Scientific Computing and Imaging Institute (SCI) at the University of Utah, whose vision was to create a tool that would be dedicated to a specific function, segmentation, and would be easy to use and...
    Downloads: 17 This Week
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  • 2
    Downloads: 0 This Week
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  • 3

    StatPlanet Data Editor

    Automate merging / importing of country data from different sources

    The aim of this project is to automate and simplify the linking / merging / importing of country data from various sources, such as UNESCO, WHO, World Bank, IMF, etc. Project website: www.statsilk.com
    Downloads: 0 This Week
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  • 4

    LogisticBell

    Here we test the Logistic Map using finite and infinite precision...

    Here we test the Logistic Map using finite and infinite precision floats (Apfloats). More decimals produce longer sequence (longer chaotic signal for certain parameters). Shorter decimal precision makes the sequence converge to zero eventually. In the process, number of decimals rises and then drops for some reason, forming a bell-shaped curve with long tail. On second consideration, this does not look like a bell-shaped curve at all. Logistic map calculated with parameters x initial = 0.9...
    Downloads: 0 This Week
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  • 5
    Python language bindings for the GtkExtra widget set. GtkExtra is a useful set of widgets for the GIMP Toolkit, aka GTK+. It provides a spreadsheet-like matrix widget and widgets for 2-D and 3-D graphing.
    Downloads: 0 This Week
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  • 6
    Xmind

    Xmind

    The most popular mindmapping and brainstorming software

    Professional and powerful brainstorming and mind mapping software tool, open source, Eclipse Community Award winner, often used for capture ideas, knowledge/project management and GTD, supporting fishbones/org-charts/tree charts/spreadsheets, easy-to-use.
    Downloads: 25 This Week
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  • 7
    CQRlib is an ANSI C implementation of a utility library for quaternion arithmetic and quaternion rotation math.
    Downloads: 1 This Week
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  • 8
    NOTE: developement of this project has moved to GitHub http://github.org/matthuska/biasviz/ BiasViz is a Java applet for visualization of amino acid bias in multiple sequence alignments.
    Downloads: 0 This Week
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  • 9

    HomSI

    Homozygous Stretch Identifier from next-generation sequencing data

    In consanguineous families, as a result of inheriting the same genomic segments through both parents, the individuals have stretches of their genomes that are homozygous. This situation leads to the prevalence of recessive diseases among the members of these families. Homozygosity mapping is based on this observation and several recessive disease genes have been discovered with the help of this technique in consanguineous families. The researchers typically use SNP arrays to determine the...
    Downloads: 0 This Week
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  • 10

    KMeansAniX

    Animation of kmeans clustering using X Window System

    Open source animation of kmeans clustering in X Window System using the C++ libplotter library. Supports Linux, Mac, and BSD. Includes common initialization methods such as Forgy, Macqueen, random, and angular. Sample videos are available through the Files Tab above. The SVN repo is accessible thorugh the Code Tab above. Requires a C++ compiler, libplot-dev, and libncurses5-dev Mac alternative to libplot-dev: macports plotutils +x11
    Downloads: 0 This Week
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  • 11
    Console for the PC DSO kit K7103 from Velleman.
    Downloads: 2 This Week
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  • 12

    TeachingDemos

    Bioinformatics related demos and tutorials using the R programming lan

    Bioinformatics related demos and tutorials using the R programming language for large biological data. Licence: Creative Commons Attribution-NonCommercial 4.0 International License
    Downloads: 3 This Week
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  • 13
    Debrief is an Open Source Java application used for viewing maritime vessel tracks in 2 and 3 dimensions. Tracks are read in using a number of flat-file ASCII formats, including AUTEC (RAO), PMRF and AFWTF.
    Downloads: 1 This Week
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  • 14

    libsvo

    A experimental framework to generate and raycast Sparse Voxel Octrees.

    A experimental framework, based on the gloost framework, to generate and raycast Sparse Voxel Octrees. This project is heavily relying on the gloost framework.
    Downloads: 0 This Week
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  • 15
    Fractal Zoom Explorer

    Fractal Zoom Explorer

    Fractal Zoom Explorer

    Fractal Explorer supporting FTF and common .NET standard supported formats
    Downloads: 0 This Week
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  • 16

    AlertWheel

    AlertWheel is a visualization-based analysis tool for Snort IDS logs

    AlertWheel is a new software application easing network analysis on large-scale networks. It is based on a novel radial visualization capable of simultaneously displaying several thousand alerts, emphasizing the most important alerts or patterns in the dataset. Among other things, AlertWheel offers a new technique for representing bipartite graphs (where links exist between two distinct node groups). Using this approach, links are positioned in a way to reduce occlusion in the visualization. ...
    Downloads: 1 This Week
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  • 17
    COV2HTML

    COV2HTML

    A visualization and analysis tool of Bacterial NGS data for Biologists

    COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria.
    Downloads: 1 This Week
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  • 18
    Flexible Brain Graph Visualizer

    Flexible Brain Graph Visualizer

    Matlab code to visualise brain graphs from connectivity matrices

    This very configurable script allows you to plot a 3D (MNI space) visualisation of a brain graph, with edges represented by cylinders and vertices represented by spheres. To aid orientation, a cortical mesh can be added, as can convex hull outlines. The colouring and sizing scheme is fully configurable for both edges and vertices. You can see some example output in...
    Downloads: 0 This Week
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  • 19
    ExplorViz

    ExplorViz

    Live Trace Visualization for Large Software Landscapes

    ExplorViz is a web-based software visualization for large software landscapes. It features two different perspectives: the landscape-level perspective and the application-level perspective. The former visualizes the systems, nodes, and application existing in the software landscape. The latter one utilizes the city metaphor to visualize the entities and communication happening in one application. For installation instructions and downloads see http://www.explorviz.net
    Downloads: 0 This Week
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  • 20
    Schedule Visualization

    Schedule Visualization

    Tool to visualize and create time-triggered schedules as gant-chart.

    The Schedule Visualization tool is based on Eclipse 4 RCP and uses Nebula Gantt charts to visualize schedules. The tool is linked to scheduling and schedule integration algorithms which allow to generate time-triggered schedules and visualizes the calculated schedules. The generated schedule might then be exported to a C header file to update the system schedule. It also supports an online mode using a network monitor to detect if nodes are offline and updates its status in the...
    Downloads: 0 This Week
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  • 21
    GoIFISH

    GoIFISH

    for the semi-automated analysis of IFISH images

    GoIFISH has been developed for the analysis of IFISH (Immunofluorescence + Fluorescence in situ Hybridisation) images, performing nuclear, membrane and spot detection. Users can manually edit segmentation results, perform background adjustments, construct heatmaps, topology maps, and perform cell classification. All results can be exported for further analysis. GoIFISH has been developed in MATLAB, however binaries are provided to run the program outside of the MATLAB environment....
    Downloads: 0 This Week
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  • 22
    Noble Ape Simulation
    Simulates a biologically diverse tropical island, and the ape inhabitants cognitive processes. For MacOS X, iPad, Windows and Linux. Features a non-polygonal graphics engine and a command-line version
    Downloads: 1 This Week
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  • 23
    NanoCap

    NanoCap

    Carbon Fullerene and Capped Nanotube Generator

    NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the...
    Downloads: 3 This Week
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  • 24

    Ezys

    Ezys 3D medical image registration program

    Ezys is a non-linear 3D medical image registration program. Ezys fully exploits the parallel computing power of inexpensive commercial graphics processing units (GPU), resulting in a very fast and accurate program capable of running on desktop PCs and even some laptops. On these systems, non-linear image registrations take less than a minute to complete. Ezys implements a diffeomorphic inverse consistent image registration algorithm with a demons-style regularization based on a...
    Downloads: 2 This Week
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  • 25
    Syntax2DNew

    Syntax2DNew

    Syntax2D (latest ver. 1.3.7.0)

    Syntax2D is a suite of tools for urban and architectural spatial analysis developed at the University of Michigan. It includes space syntax measures of isovists, axial maps, and visibility graphs, with some newer features such as path-based measures. New versions are released here.
    Downloads: 0 This Week
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