Open Source Linux Data Quality Tools - Page 2
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Data Quality Tools for Linux
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Paessler: Easy to Use With Enterprise Power. Free TrialYou shouldn't have to choose between a monitoring tool that's easy to use and one that's powerful enough for a complex environment. PRTG's low-code interface lets any admin build dashboards, set alerts and monitor devices without scripting, while custom sensors and full API access are there when your team needs deeper control. One platform, no compromise. Download a free 30-day trial now.
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Train ML Models With SQL You Already KnowBuild and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.
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A simple little engine to do fuzzy name & address searching. Helps improve data quality and avoids duplicate data entry.
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MOIRAI
Simple Scientific Workflow System for CAGE Analysis
Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. MOIRAI has a graphical interface allowing wet-lab researchers to create, modify and run analysis workflows. Embedded within the workflows are graphical quality control indicators allowing users assess data quality and to quickly spot potential problems. MOIRAI package comes with three main workflows allowing users to map, annotate and perform an expression analysis over multiple samples. -
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Medrechaincode
Lifetime medical records in decentralized chain code-network
Medrechaincode uses a blockchain technology to store patient life time medical records in decentralized node with single true version of patient medical records” Medrechaincode provides a consensus based access of patient medical record to different healthcare professionals like R&D labs, doctors, hospital & pharmacist. This platform will also help the healthcare professional to use integrated data quality tool to remove duplicity of patient records , profiling of medical records, metadata discovery , data cleansing , classification of medical records, bucketization, anomaly discovery to find out the anomalous trend of medical records. m This platform will help patient to reduced their consultation time, monetize their medical records, for labs to get the historical records & come up with new medicine and make a clinical trial. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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NBi
NBi is a testing framework (add-on to NUnit)
NBi is a testing framework (add-on to NUnit) for Business Intelligence. It supports most of the relational databases (SQL server, MySQL, postgreSQL ...) and OLAP platforms (Analysis Services, Mondrian ...) but also ETL and reporting components (Microsoft technologies). The main goal of this framework is to let users create tests with a declarative approach based on an Xml syntax. By the means of NBi, you don't need to develop C# code to specify your tests! Either, you don't need Visual Studio to compile your test suite. Just create an Xml file and let the framework interpret it and play your tests. The framework is designed as an add-on of NUnit but with the possibility to port it easily to other testing frameworks. -
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ODD Platform
First open-source data discovery and observability platform
Unlock the power of big data with OpenDataDiscovery Platform. Experience seamless end-to-end insights, powered by unprecedented observability and trust - from ingestion to production - while building your ideal tech stack! Democratize data and accelerate insights. Find data that fits your use case and discover hints left by your peers to leverage existing knowledge. Explore tags, ownership details, links to other sources and other information to shorten and simplify data discovery phase. Forget unnerved stakeholders and wasting too much time on digging the root cause of data issues when it fails. With ODD’s automatic company-wide ingestion-to-product lineage you’ll have answers in just seconds and stakeholders won’t need to wait. Sleep well, knowing all your data is in check. Forget manual testing, days of debugging, and weeks of worrying. Know the impact of each code change with automatic testing. Enjoy lineage and alerts powered with data quality information. -
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Open Source Data Quality and Profiling
World's first open source data quality & data preparation project
This project is dedicated to open source data quality and data preparation solutions. Data Quality includes profiling, filtering, governance, similarity check, data enrichment alteration, real time alerting, basket analysis, bubble chart Warehouse validation, single customer view etc. defined by Strategy. This tool is developing high performance integrated data management platform which will seamlessly do Data Integration, Data Profiling, Data Quality, Data Preparation, Dummy Data Creation, Meta Data Discovery, Anomaly Discovery, Data Cleansing, Reporting and Analytic. It also had Hadoop ( Big data ) support to move files to/from Hadoop Grid, Create, Load and Profile Hive Tables. This project is also known as "Aggregate Profiler" Resful API for this project is getting built as (Beta Version) https://sourceforge.net/projects/restful-api-for-osdq/ apache spark based data quality is getting built at https://sourceforge.net/projects/apache-spark-osdq/ -
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Pandas Profiling
Create HTML profiling reports from pandas DataFrame objects
pandas-profiling generates profile reports from a pandas DataFrame. The pandas df.describe() function is handy yet a little basic for exploratory data analysis. pandas-profiling extends pandas DataFrame with df.profile_report(), which automatically generates a standardized univariate and multivariate report for data understanding. High correlation warnings, based on different correlation metrics (Spearman, Pearson, Kendall, Cramér’s V, Phik). Most common categories (uppercase, lowercase, separator), scripts (Latin, Cyrillic) and blocks (ASCII, Cyrilic). File sizes, creation dates, dimensions, indication of truncated images and existance of EXIF metadata. Mostly global details about the dataset (number of records, number of variables, overall missigness and duplicates, memory footprint). Comprehensive and automatic list of potential data quality issues (high correlation, skewness, uniformity, zeros, missing values, constant values, between others). -
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PrepMS is a simple-to-use graphical application for MS data preprocessing, peak detection, and visual data quality assessment. PrepMS is a compiled stand-alone application. Project homepage: http://stat.tamu.edu/~yuliya/prepMS.html
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Custom VMs From 1 to 96 vCPUs With 99.95% UptimeLive migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.
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Qualitis
Qualitis is a one-stop data quality management platform
Qualitis is a data quality management platform that supports quality verification, notification, and management for various datasource. It is used to solve various data quality problems caused by data processing. Based on Spring Boot, Qualitis submits quality model task to Linkis platform. It provides functions such as data quality model construction, data quality model execution, data quality verification, reports of data quality generation and so on. At the same time, Qualitis provides enterprise-level features of financial-level resource isolation, management and access control. It is also guaranteed working well under high-concurrency, high-performance and high-availability scenarios. -
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Restful APIs for Data Cleansing
This is sister project for osDQ which provide Restful APIs
(Beta Version) This is sister project for https://sourceforge.net/projects/dataquality/ . It provides Restful APIs for features for data quality and data preparation features. This project will help projects which want embed data quality and data preparation features in their project or UI using restful calls. Data Cleansing APIs Dockerfile: # Pull base image FROM frnde/jetty-9.4.2-jre8-alpine-cet ADD osdq-v0.0.1.war /var/lib/jetty/webapps/osdq.war EXPOSE 8080 Docker Image https://hub.docker.com/r/vreddym/osdq-web/tags -
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SDGym
Benchmarking synthetic data generation methods
The Synthetic Data Gym (SDGym) is a benchmarking framework for modeling and generating synthetic data. Measure performance and memory usage across different synthetic data modeling techniques – classical statistics, deep learning and more! The SDGym library integrates with the Synthetic Data Vault ecosystem. You can use any of its synthesizers, datasets or metrics for benchmarking. You also customize the process to include your own work. Select any of the publicly available datasets from the SDV project, or input your own data. Choose from any of the SDV synthesizers and baselines. Or write your own custom machine learning model. In addition to performance and memory usage, you can also measure synthetic data quality and privacy through a variety of metrics. Install SDGym using pip or conda. We recommend using a virtual environment to avoid conflicts with other software on your device. -
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SQLBucket
Lightweight library to write, orchestrate and test your SQL ETL
SQLBucket is a lightweight framework to help write, orchestrate and validate SQL data pipelines. It gives the possibility to set variables and introduces some control flow using the fantastic Jinja2 library. It also implements a very simplistic unit and integration test framework where you can validate the results of your ETL in the form of SQL checks. With SQLBucket, you can apply TDD principles when writing data pipelines. To start working, you need to instantiate your SQLBucket core object with the project_folder parameter. That folder will contain all your SQL ETL. The python file where you create your SQLBucket object is also a good place to instantiate your command line interface. -
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Toolsverse ETL Framework
Open source Extract Transform Load engine written in Java
ETL Framework is a standalone Extract Transform Load engine written in Java. It includes executables for all major platforms and can be easily integrated into other applications. Key Features: * embeddable, open source and free * fast and scalable * uses target database features to do transformations and loads * manual and automatic data mapping * data streaming * bulk data loads * data quality features using SQL, JavaScript? and regex * data transformations Requirements * Java 1.6 and up * At least 4 MB of RAM New in 3.2 (01/18/2013) * Improved auto-update functionality * Bug fixes -
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WhyLogs Java Library
Profile and monitor your ML data pipeline end-to-end
This is a Java implementation of WhyLogs, with support for Apache Spark integration for large scale datasets. Understanding the properties of data as it moves through applications is essential to keeping your ML/AI pipeline stable and improving your user experience, whether your pipeline is built for production or experimentation. WhyLogs is an open source statistical logging library that allows data science and ML teams to effortlessly profile ML/AI pipelines and applications, producing log files that can be used for monitoring, alerts, analytics, and error analysis. WhyLogs calculates approximate statistics for datasets of any size up to TB-scale, making it easy for users to identify changes in the statistical properties of a model's inputs or outputs. Using approximate statistics allows the package to run on minimal infrastructure and monitor an entire dataset, rather than miss outliers and other anomalies by only using a sample of the data to calculate statistics. -
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apache spark data pipeline osDQ
osDQ dedicated to create apache spark based data pipeline using JSON
This is an offshoot project of open source data quality (osDQ) project https://sourceforge.net/projects/dataquality/ This sub project will create apache spark based data pipeline where JSON based metadata (file) will be used to run data processing , data pipeline , data quality and data preparation and data modeling features for big data. This uses java API of apache spark. It can run in local mode also. Get json example at https://github.com/arrahtech/osdq-spark How to run Unzip the zip file Windows : java -cp .\lib\*;osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c .\example\samplerun.json Mac UNIX java -cp ./lib/*:./osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c ./example/samplerun.json For those on windows, you need to have hadoop distribtion unzipped on local drive and HADOOP_HOME set. Also copy winutils.exe from here into HADOOP_HOME\bin -
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data-diff
Efficiently diff rows across two different databases
We're excited to announce the launch of a new open-source product, data-diff that makes comparing datasets across databases fast at any scale. data-diff automates data quality checks for data replication and migration. In modern data platforms, data is constantly moving between systems, and at the modern data volume and complexity, systems go out of sync all the time. Until now, there has not been any tooling to ensure that when the data is correctly copied. Replicating data at scale, across hundreds of tables, with low latency and at a reasonable infrastructure cost is a hard problem, and most data teams we’ve talked to, have faced data quality issues in their replication processes. The hard truth is that the quality of the replication is the quality of the data. Since copying entire datasets in batch is often infeasible at the modern data scale, businesses rely on the Change Data Capture (CDC) approach of replicating data using a continuous stream of updates. -
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dbt-re-data
re_data - fix data issues before your users & CEO would discover them
re_data is an open-source data reliability framework for the modern data stack. Currently, re_data focuses on observing the dbt project (together with underlaying data warehouse - Postgres, BigQuery, Snowflake, Redshift). Data transformations in re_data are implemented and exposed as models & macros in this dbt package. Gather all relevant outputs about your data in one place using our cloud. Invite your team and debug it easily from there. Go back in time, and see your past metadata. Set up Slack notifications to always know when a new report is produced or an existing one got updated. -
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DNAA is the DNA analysis package, for analyzing next-generation post-alignment whole genome resequencing data. Specifically, DNAA is able to find structural variation, SNP and indel variants, as well as evaluating the mapping and data quality.
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lakeFS
lakeFS - Git-like capabilities for your object storage
Increase data quality and reduce the painful cost of errors. Data engineering best practices using git-like operations on data. lakeFS is an open-source data version control for data lakes. It enables zero-copy Dev / Test isolated environments, continuous quality validation, atomic rollback on bad data, reproducibility, and more. Data is dynamic, it changes over time. Dealing with that without a data version control system is error-prone and labor-intensive. With lakeFS, your data lake is version controlled and you can easily time-travel between consistent snapshots of the lake. Easier ETL testing - test your ETLs on top of production data, in isolation, without copying anything. Safely experiment and test on full production data. Easily Collaborate on production data with your team. Automate data quality checks within data pipelines. -
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methylQA
methylation sequence data quality assessment tool
methylation sequence data quality assessment tool -
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re_data
re_data - fix data issues before your users & CEO would discover them
re_data is an open-source data reliability framework for the modern data stack. Currently, re_data focuses on observing the dbt project (together with underlying data warehouse - Postgres, BigQuery, Snowflake, Redshift). Gather all relevant outputs about your data in one place using our cloud. Invite your team and debug it easily from there. Go back in time, and see your past metadata. Set up Slack notifications to always know when a new report is produced or an existing one got updated. -
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SolexaQA is a software to calculate quality statistics and visual representations of data quality for second-generation sequencing data.
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ydata-profiling
Create HTML profiling reports from pandas DataFrame objects
ydata-profiling primary goal is to provide a one-line Exploratory Data Analysis (EDA) experience in a consistent and fast solution. Like pandas df.describe() function, that is so handy, ydata-profiling delivers an extended analysis of a DataFrame while allowing the data analysis to be exported in different formats such as html and json.
