Showing 27 open source projects for "java open source"

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  • 1
    ggplot2

    ggplot2

    An implementation of the Grammar of Graphics in R

    ggplot2 is a system written in R for declaratively creating graphics. It is based on The Grammar of Graphics, which focuses on following a layered approach to describe and construct visualizations or graphics in a structured manner. With ggplot2 you simply provide the data, tell ggplot2 how to map variables to aesthetics, what graphical primitives to use, and it will take care of the rest. ggplot2 is over 10 years old and is used by hundreds of thousands of people all over the world for...
    Downloads: 50 This Week
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  • 2
    gtsummary

    gtsummary

    Presentation-Ready Data Summary and Analytic Result Tables

    gtsummary is an R package for creating elegant, customizable, publication-ready summary tables of datasets and statistical models. It provides concise code to produce demographic tables (tbl_summary()), regression result tables, and more, with flexible styling options for reporting.
    Downloads: 1 This Week
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  • 3
    pointblank

    pointblank

    Data quality assessment and metadata reporting for data frames

    With the pointblank package it’s really easy to methodically validate your data whether in the form of data frames or as database tables. On top of the validation toolset, the package gives you the means to provide and keep up-to-date with the information that defines your tables. For table validation, the agent object works with a large collection of simple (yet powerful!) validation functions. We can enable much more sophisticated validation checks by using custom expressions, segmenting...
    Downloads: 2 This Week
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  • 4
    tidyr

    tidyr

    Tidy Messy Data

    tidyr is a core tidyverse package designed to help reshape and clean messy datasets into tidy data—i.e., data frames where each variable is a column, each observation is a row, and each value is a cell.
    Downloads: 0 This Week
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  • 5
    janitor

    janitor

    Simple tools for data cleaning in R

    janitor provides simple, convenient tools for data cleaning, formatting, and exploration in R. It is especially useful for cleaning messy data frames, removing duplicates, formatting column names, and producing frequency tables in a tidy workflow.
    Downloads: 0 This Week
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  • 6
    ggforce

    ggforce

    Accelerating ggplot2

    ggforce is an extension package for ggplot2 that introduces specialized statistical transforms, geoms, and layout utilities to enhance and complement the built-in ggplot2 offerings. It enables more advanced visualization techniques such as faceting enhancements, hulls, annotation marks, and novel layouts for network data and marked regions.
    Downloads: 0 This Week
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  • 7
    sparklyr

    sparklyr

    R interface for Apache Spark

    sparklyr is an R package that provides seamless interfacing with Apache Spark clusters—either local or remote—while letting users write code in familiar R paradigms. It supplies a dplyr-compatible backend, Spark machine learning pipelines, SQL integration, and I/O utilities to manipulate and analyze large datasets distributed across cluster environments.
    Downloads: 0 This Week
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  • 8
    FriendsDon'tLetFriends

    FriendsDon'tLetFriends

    Friends don't let friends make certain types of data visualization

    Friends don't let friends make certain types of data visualization - What are they and why are they bad.
    Downloads: 0 This Week
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  • 9
    ggstatsplot

    ggstatsplot

    Enhancing {ggplot2} plots with statistical analysis

    {ggstatsplot} is an extension of {ggplot2} package for creating graphics with details from statistical tests included in the information-rich plots themselves. In a typical exploratory data analysis workflow, data visualization and statistical modeling are two different phases: visualization informs modeling, and modeling in its turn can suggest a different visualization method, and so on and so forth. Bayesian hypothesis-testing. The central idea of {ggstatsplot} is simple: combine these...
    Downloads: 0 This Week
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  • 10
    reticulate

    reticulate

    R Interface to Python

    reticulate is an R package from Posit that creates seamless interoperability between R and Python. It lets you call Python modules, classes, and functions from within R, automatically translating between R and Python data structures. Useful for combining Python tooling with R projects, data analysis, and RMarkdown reports.
    Downloads: 0 This Week
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  • 11
    plotly

    plotly

    An interactive graphing library for R

    This part of the book teaches you how to leverage the plotly R package to create a variety of interactive graphics. There are two main ways to creating a plotly object: either by transforming a ggplot2 object (via ggplotly()) into a plotly object or by directly initializing a plotly object with plot_ly()/plot_geo()/plot_mapbox(). Both approaches have somewhat complementary strengths and weaknesses, so it can pay off to learn both approaches. Moreover, both approaches are an implementation of...
    Downloads: 0 This Week
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  • 12
    esquisse

    esquisse

    RStudio add-in to make plots interactively with ggplot2

    The purpose of this add-in is to let you explore your data quickly to extract the information they hold. You can create visualization with {ggplot2}, filter data with {dplyr} and retrieve generated code. This addin allows you to interactively explore your data by visualizing it with the ggplot2 package. It allows you to draw bar plots, curves, scatter plots, histograms, boxplot and sf objects, then export the graph or retrieve the code to reproduce the graph. This addin allows you to...
    Downloads: 0 This Week
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  • 13
    JuliaConnectoR

    JuliaConnectoR

    A functionally oriented interface for calling Julia from R

    This R-package provides a functionally oriented interface between R and Julia. The goal is to call functions from Julia packages directly as R functions. Julia functions imported via the JuliaConnectoR can accept and return R variables. It is also possible to pass R functions as arguments in place of Julia functions, which allows callbacks from Julia to R. From a technical perspective, R data structures are serialized with an optimized custom streaming format, sent to a (local) Julia TCP...
    Downloads: 0 This Week
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  • 14
    gt R

    gt R

    Easily generate information-rich, publication-quality tables from R

    With the gt package, anyone can make wonderful-looking tables using the R programming language. The gt philosophy: we can construct a wide variety of useful tables with a cohesive set of table parts. These include the table header, the stub, the column labels and spanner column labels, the table body, and the table footer. It all begins with table data (be it a tibble or a data frame). You then decide how to compose your gt table with the elements and formatting you need for the task at...
    Downloads: 0 This Week
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  • 15
    see

    see

    Visualisation toolbox for beautiful and publication-ready figures

    see is an R package that serves as the visualization component of the easystats ecosystem, providing plotting utilities to produce publication-ready visualizations of statistical model parameters, diagnostics, predictions, and performance metrics. It works in conjunction with other easystats packages (such as parameters, performance, modelbased, bayestestR, etc.) to convert model outputs or summary objects into visual forms (dot-and-whisker plots, diagnostic plots, residual plots, etc.). It...
    Downloads: 0 This Week
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  • 16
    ggrepel

    ggrepel

    epel overlapping text labels away from each other in your ggplot2

    ggrepel is an R package that provides “smart” repulsion for text and label geoms in ggplot2. When placing text labels on a plot (e.g. labeling points), the labels can often overlap; ggrepel ensures labels don’t overlap (or overlap less) by repelling labels / pushing them away, adding connecting lines or nudges, etc. It improves the readability of plots, especially when many labels are present. Support for point and segment geoms (so labels can be connected by lines when moved). Supports both...
    Downloads: 0 This Week
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  • 17
    nichenetr

    nichenetr

    NicheNet: predict active ligand-target links between interacting cells

    nichenetr: the R implementation of the NicheNet method. The goal of NicheNet is to study intercellular communication from a computational perspective. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with a prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on...
    Downloads: 0 This Week
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  • 18
    brms

    brms

    brms R package for Bayesian generalized multivariate models using Stan

    brms is an R package by Paul Bürkner which provides a high-level interface for fitting Bayesian multilevel (i.e. mixed effects) models, generalized linear / non-linear / multivariate models using Stan as the backend. It allows R users to specify complex Bayesian models using formula syntax similar to lme4 but with far more flexibility (distributions, link functions, hierarchical structure, nonlinear terms, etc.). It supports model diagnostics, posterior predictive checking, model comparison,...
    Downloads: 0 This Week
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  • 19
    LabPlot

    LabPlot

    Data Visualization and Analysis

    LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone.
    Downloads: 36 This Week
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  • 20
    MHNs Data Science Examples

    MHNs Data Science Examples

    Collection of data science examples.

    Downloads: 0 This Week
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  • 21
    hui

    hui

    hewies user interface - 3D scientific visualisation tool

    Python project with goal to provide FOSS library to extract, analyse and visualise data in a 3D fashion. The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS
    Downloads: 0 This Week
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  • 22
    Reproducible-research

    Reproducible-research

    A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.

    In this tutorial, we describe a workflow to ensure long-term reproducibility of R-based data analyses. The workflow leverages established tools and practices from software engineering. It combines the benefits of various open-source software tools including R Markdown, Git, Make, and Docker, whose interplay ensures seamless integration of version management, dynamic report generation conforming to various journal styles, and full cross-platform and long-term computational reproducibility. The workflow ensures meeting the primary goals that 1) the reporting of statistical results is consistent with the actual statistical results (dynamic report generation), 2) the analysis exactly reproduces at a later point in time even if the computing platform or software is changed (computational reproducibility), and 3) changes at any time (during development and post-publication) are tracked, tagged, and documented while earlier versions of both data and code remain accessible.
    Downloads: 0 This Week
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  • 23
    hrbrthemes

    hrbrthemes

    Opinionated, typographic-centric ggplot2 themes and theme components

    hrbrthemes is a focused ggplot2 theme package with an emphasis on typography, layout precision, and visual polish. It includes themes like theme_ipsum and Font scales tailored for clean, high‑quality production graphics.
    Downloads: 2 This Week
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  • 24
    Harmony Data Integration

    Harmony Data Integration

    Fast, sensitive and accurate integration of single-cell data

    Harmony is a general-purpose R package with an efficient algorithm for integrating multiple data sets. It is especially useful for large single-cell datasets such as single-cell RNA-seq. Harmony has been tested on R versions =4. Please consult the DESCRIPTION file for more details on required R packages. Harmony has been tested on Linux, OS X, and Windows platforms.
    Downloads: 0 This Week
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  • 25
    ComplexHeatmap

    ComplexHeatmap

    Make Complex Heatmaps

    ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with sidebars, annotations, clustering, etc. Highly customizable layout: combining different heatmaps, arranging and...
    Downloads: 0 This Week
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