Search Results for "linux tool"
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Showing 67 open source projects for "linux tool"
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MinerU
A high-quality tool for convert PDF to Markdown and JSON
MinerU is an open-source, high-quality document extraction toolkit focused on converting PDFs (and other document formats) into structured Markdown and JSON. It leverages OCR and layout analysis to preserve semantic structure and metadata, ideal for research and data science workflows. -
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pandas
Fast, flexible and powerful Python data analysis toolkit
pandas is a Python data analysis library that provides high-performance, user friendly data structures and data analysis tools for the Python programming language. It enables you to carry out entire data analysis workflows in Python without having to switch to a more domain specific language. With pandas, performance, productivity and collaboration in doing data analysis in Python can significantly increase. pandas is continuously being developed to be a fundamental high-level building... -
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Orange Data Mining
Orange: Interactive data analysis
Open source machine learning and data visualization. Build data analysis workflows visually, with a large, diverse toolbox. Perform simple data analysis with clever data visualization. Explore statistical distributions, box plots and scatter plots, or dive deeper with decision trees, hierarchical clustering, heatmaps, MDS and linear projections. Even your multidimensional data can become sensible in 2D, especially with clever attribute ranking and selections. Interactive data exploration for... -
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BertViz
BertViz: Visualize Attention in NLP Models (BERT, GPT2, BART, etc.)
BertViz is an interactive tool for visualizing attention in Transformer language models such as BERT, GPT2, or T5. It can be run inside a Jupyter or Colab notebook through a simple Python API that supports most Huggingface models. BertViz extends the Tensor2Tensor visualization tool by Llion Jones, providing multiple views that each offer a unique lens into the attention mechanism. The head view visualizes attention for one or more attention heads in the same layer. It is based on the... -
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FiftyOne
The open-source tool for building high-quality datasets
The open-source tool for building high-quality datasets and computer vision models. Nothing hinders the success of machine learning systems more than poor-quality data. And without the right tools, improving a model can be time-consuming and inefficient. FiftyOne supercharges your machine learning workflows by enabling you to visualize datasets and interpret models faster and more effectively. Improving data quality and understanding your model’s failure modes are the most impactful ways to... -
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Metacrafter
Metadata and data identification tool and Python library
Python command line tool and Python engine to label table fields and fields in data files. It could help to find meaningful data in your tables and data files or to find Personal identifiable information (PII). Metacrafter is a rule-based tool that helps to label fields of the tables in databases. It scans table and finds person names, surnames, midnames, PII data, basic identifiers like UUID/GUID. These rules written as .yaml files and could be easily extended. -
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CellTypist
A tool for semi-automatic cell type classification, harmonization
CellTypist is an automated tool for cell type classification, harmonization, and integration. Classification, transfer cell type labels from the reference to query dataset. Harmonization, match and harmonize cell types defined by independent datasets. integration, integrate cell and cell types with supervision from harmonization. CellTypist recapitulates cell type structure and biology of independent datasets. Regularised linear models with Stochastic Gradient Descent provide a fast and... -
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Covalent workflow
Pythonic tool for running machine-learning/high performance workflows
Covalent is a Pythonic workflow tool for computational scientists, AI/ML software engineers, and anyone who needs to run experiments on limited or expensive computing resources including quantum computers, HPC clusters, GPU arrays, and cloud services. Covalent enables a researcher to run computation tasks on an advanced hardware platform – such as a quantum computer or serverless HPC cluster – using a single line of code. Covalent overcomes computational and operational challenges inherent... -
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CleanVision
Automatically find issues in image datasets
CleanVision automatically detects potential issues in image datasets like images that are: blurry, under/over-exposed, (near) duplicates, etc. This data-centric AI package is a quick first step for any computer vision project to find problems in the dataset, which you want to address before applying machine learning. CleanVision is super simple -- run the same couple lines of Python code to audit any image dataset! The quality of machine learning models hinges on the quality of the data used... -
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Datumaro
Dataset Management Framework, a Python library and a CLI tool to build
Datumaro is a flexible Python-based dataset management framework and command-line tool for building, analyzing, transforming, and converting computer vision datasets in many popular formats. It supports importing and exporting annotations and images across a wide variety of standards like COCO, PASCAL VOC, YOLO, ImageNet, Cityscapes, and many more, enabling easy integration with different training pipelines and tools. Datumaro makes it easy to merge datasets, split them into... -
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JILL.py
A cross-platform installer for the Julia programming language
The enhanced Python fork of JILL, Julia Installer for Linux (and every other platform), Light. -
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PySR
High-Performance Symbolic Regression in Python and Julia
PySR is an open-source tool for Symbolic Regression: a machine learning task where the goal is to find an interpretable symbolic expression that optimizes some objective. Over a period of several years, PySR has been engineered from the ground up to be (1) as high-performance as possible, (2) as configurable as possible, and (3) easy to use. PySR is developed alongside the Julia library SymbolicRegression.jl, which forms the powerful search engine of PySR. The details of these algorithms are... -
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Neuroglancer
WebGL-based viewer for volumetric data
Neuroglancer is a WebGL-based visualization tool designed for exploring large-scale volumetric and neuroimaging datasets directly in the browser. It allows users to interactively view arbitrary 2D and 3D cross-sections of volumetric data alongside 3D meshes and skeleton models, enabling precise examination of neural structures and biological imaging results. Its multi-pane interface synchronizes multiple orthogonal views with a central 3D viewport, making it ideal for analyzing complex brain... -
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Dagster
An orchestration platform for the development, production
Dagster is an orchestration platform for the development, production, and observation of data assets. Dagster as a productivity platform: With Dagster, you can focus on running tasks, or you can identify the key assets you need to create using a declarative approach. Embrace CI/CD best practices from the get-go: build reusable components, spot data quality issues, and flag bugs early. Dagster as a robust orchestration engine: Put your pipelines into production with a robust... -
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F1 Race Replay
An interactive Formula 1 race visualisation and data analysis tool
F1 Race Replay is an interactive replay viewer that lets users watch and analyze recorded Formula 1 race sessions with precise control over camera angles, timing, and telemetry overlay, offering a rich experience beyond standard broadcast replays. It ingests official timing and positional data, then renders vehicle movements through track maps and 3D visualizations so fans, analysts, and engineers can review strategy, overtakes, tire degradation effects, and pit stop impacts in detail. Users... -
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JS Analyzer
Burp Suite extension for JavaScript static analysis
JS Analyzer is a powerful static analysis tool implemented as a Burp Suite extension that helps security researchers and web developers automatically uncover important artifacts in JavaScript files during web application testing. It parses JavaScript responses intercepted by Burp Suite and intelligently extracts API endpoints, full URLs (including cloud storage links), secrets like API keys or tokens, and email addresses while filtering out noise from irrelevant code patterns. The extension... -
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nb-clean
Clean Jupyter notebooks of outputs, metadata, and empty cells
nb-clean cleans Jupyter notebooks of cell execution counts, metadata, outputs, and (optionally) empty cells, preparing them for committing to version control. It provides both a Git filter and pre-commit hook to automatically clean notebooks before they're staged, and can also be used with other version control systems, as a command line tool, and as a Python library. It can determine if a notebook is clean or not, which can be used as a check in your continuous integration pipelines.... -
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geemap
A Python package for interactive geospaital analysis and visualization
A Python package for interactive geospatial analysis and visualization with Google Earth Engine. Geemap is a Python package for geospatial analysis and visualization with Google Earth Engine (GEE), which is a cloud computing platform with a multi-petabyte catalog of satellite imagery and geospatial datasets. During the past few years, GEE has become very popular in the geospatial community and it has empowered numerous environmental applications at local, regional, and global scales. GEE... -
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Mage.ai
Build, run, and manage data pipelines for integrating data
Open-source data pipeline tool for transforming and integrating data. The modern replacement for Airflow. Effortlessly integrate and synchronize data from 3rd party sources. Build real-time and batch pipelines to transform data using Python, SQL, and R. Run, monitor, and orchestrate thousands of pipelines without losing sleep. Have you met anyone who said they loved developing in Airflow? That’s why we designed an easy developer experience that you’ll enjoy. Each step in your pipeline is a... -
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GMAT
General Mission Analysis Tool
The General Mission Analysis Tool (GMAT) is an open-source tool for space mission design and navigation. GMAT is developed by a team of NASA, private industry, and public and private contributors. The GMAT development team is pleased to announce the release of GMAT version R2025a. For a complete list of new features, compatibility changes, and bug fixes, see the R2025a Release Notes in the Users Guide. -
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Gwyddion
Scanning probe microscopy data visualisation and analysis
A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis. -
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dxf2gcode
DXF2GCODE: converting 2D dxf drawings to CNC machine compatible G-Code
DXF2GCODE is a tool for converting 2D (dxf, pdf, ps) drawings to CNC machine compatible GCode. Windows, Linux, and Mac support by using python scripting language. -
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QUAST
Quality Assessment Tool for Genome Assemblies
QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A... -
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Mara Pipelines
A lightweight opinionated ETL framework, halfway between plain scripts
This package contains a lightweight data transformation framework with a focus on transparency and complexity reduction. Data integration pipelines as code: pipelines, tasks and commands are created using declarative Python code. PostgreSQL as a data processing engine. Extensive web ui. The web browser as the main tool for inspecting, running and debugging pipelines. GNU make semantics. Nodes depend on the completion of upstream nodes. No data dependencies or data flows. No in-app data... -
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hui
hewies user interface - 3D scientific visualisation tool
Python project with goal to provide FOSS library to extract, analyse and visualise data in a 3D fashion. The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS
