Search Results for "create"

...Thus, the script filters given peptide lists for library peptides (generated by the digestion protease in the proteomics workflow rather then the protease of interest) and prints out lists of inferred N- and C-terminal cleavage window extensions which can be concurrently used to generate cleavage specificity visualizations like the iceLogo (https://iomics.ugent.be/icelogoserver/create).

scriptLattes is an open-source system to create academic reports of groups based on curricula vitae of the Brazilian Lattes Database.

Flame graphs are a visualization of profiled software, allowing the most frequent code-paths to be identified quickly and accurately. They can be generated using my open source programs, which create interactive SVGs. See the Updates section for other implementations. Recently I've been helping with d3-flame-graph. The x-axis shows the stack profile population, sorted alphabetically (it is not the passage of time), and the y-axis shows stack depth, counting from zero at the bottom. Each rectangle represents a stack frame. The wider a frame is is, the more often it was present in the stacks. ...

...MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. MOIRAI has a graphical interface allowing wet-lab researchers to create, modify and run analysis workflows. Embedded within the workflows are graphical quality control indicators allowing users assess data quality and to quickly spot potential problems. MOIRAI package comes with three main workflows allowing users to map, annotate and perform an expression analysis over multiple samples.

The goal of the Perl OBD-II Logger project is to create a flexible and efficient application that can capture and log OBD-II Mode 0x01 PID data from an automotive scantool. It is designed with accurate and efficient PID data logging in mind, and provides NO support for reading or resetting diagnostic trouble codes. By default, the output log file contains time-stamped PID values in a simple Comma Separated Values (CSV) format that can be readily imported into popular data analysis or spreadsheet applications. ...

...A collection of Perl scripts that enable quick visualizations of features on linkage groups, psuedochromosomes or cytogenetic maps. Intended for whole-genome views of data but can be used to create images of single chromosomes/linkage groups, contigs, or BACs, or even proteins -- any feature that has a location on a backbone. Handles most standard genetic/genomic coordinate systems. Reads GFF3 data and produces a PNG or SVG image.

The q utility is a platform for creating and managing data analysis pipelines. It expands the value of your existing job scheduler - either Grid Engine or TORQUE PBS - through numerous functions that help you organize, submit, monitor, manage and share your informatics work. Data processing pipelines require high-level organization and parallelization of work to optimize resource utilization and decrease the time to results. q (from queue) allows complex job sequences to be efficiently...

Plotmeister is a data exploration tool. It parses your ASCII data and generates a simple (text-based) table format. You can modify this table and eventually create nice looking figures.

This is an enterprise-strength system for batch file processing, e.g. transfer, parse and load data using batch (text) files within and without the enterprise. The system is controlled through parameters and doesn't require any programming, code generation or code deployment. This is a heavy duty back end system with no GUI. Nonetheless it's very easy to use, easier than most GUI-based ETLs, even easier to install. It currently supports 4 major dbs: Oracle, Sybase, MySQL, MSSQL. The free...

Create colorful WiFi signal strength maps from NetStumbler GPS and signal data. Compatible with Google Earth. As far as we know, this is the only dedicated wifi mapper / map generation software currently available under GPL.

StateVis is a package that allows states (or groups) to create a browsable database of their Landsat holdings.

Mizore is a suite of evolutionary algorithm tools used to create and simulate artificial neural networks for solving temporally expressed problems.