Interactive Visualization Workshop
Geostatistics and geosciences modeling software
PyMOL is an OpenGL based molecular visualization system
http://www.sciencedirect.com/science/article/pii/S1047847711003492
Collaborative Computing Project for NMR (CCPN)
An intuitive molecular editor and visualization tool
Scanning Probe Image Wizard - MATLAB Toolbox
Carbon Fullerene and Capped Nanotube Generator
A Library for Interactive Modelling and Visualisation
Portable Ubuntu Linux for Scientific Computing
C++ lib, that provides access to multiple ROOT routines (root.cern.ch)