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Showing 92 open source projects for "basic linux"
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awesome-single-cell
Community-curated list of software packages and data resources
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc. List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. Ascend is an R package comprised of fast, streamlined analysis functions optimized to... -
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Bayesian Optimization
Python implementation of global optimization with gaussian processes
This is a constrained global optimization package built upon bayesian inference and gaussian process, that attempts to find the maximum value of an unknown function in as few iterations as possible. This technique is particularly suited for optimization of high cost functions, situations where the balance between exploration and exploitation is important. More detailed information, other advanced features, and tips on usage/implementation can be found in the examples folder. Follow the basic... -
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HStreamDB
HStreamDB is an open-source, cloud-native streaming database
HStreamDB is an open-source, cloud-native streaming database for IoT and beyond. Modernize your data stack for real-time applications. By subscribing to streams in HStreamDB, any update of the data stream will be pushed to your apps in real-time, and this promotes your apps to be more responsive. You can also replace message brokers with HStreamDB and everything you do with message brokers can be done better with HStreamDB. HStreamDB provides built-in support for event time-based stream... -
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FreeImage is a library project for developers who would like to support popular graphics image formats (PNG, JPEG, TIFF, BMP and others). Some highlights are: extremely simple in use, not limited to the local PC (unique FreeImageIO) and Plugin driven!
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Go From AI Idea to AI App FastAccess Gemini 3 and 200+ models. Build chatbots, agents, or custom models with built-in monitoring and scaling.
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Hyperspectral data analysis in R
Handling and basic analysis of hyperspectral data in R
The hsdar package contains classes and functions to manage, analyse and simulate hyperspectral data. These might be either spectrometer measurements or hyperspectral images through the interface of rgdal. -
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Bayesian Julia
Bayesian Statistics using Julia and Turing
Bayesian statistics is an approach to inferential statistics based on Bayes' theorem, where available knowledge about parameters in a statistical model is updated with the information in observed data. The background knowledge is expressed as a prior distribution and combined with observational data in the form of a likelihood function to determine the posterior distribution. The posterior can also be used for making predictions about future events. Bayesian statistics is a departure from... -
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PipeRider
Code review for data in dbt
PipeRider automatically compares your data to highlight the difference in impacted downstream dbt models so you can merge your Pull Requests with confidence. PipeRider can profile your dbt models and obtain information such as basic data composition, quantiles, histograms, text length, top categories, and more. PipeRider can integrate with dbt metrics and present the time-series data of metrics in the report. PipeRider generates a static HTML report each time it runs, which can be viewed... -
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ipyvolume
3d plotting for Python in the Jupyter notebook
3d plotting for Python in the Jupyter notebook based on IPython widgets using WebGL. Create quiver plots (like scatter, but with an arrow pointing in a particular direction). Render in the Jupyter notebook, or create a standalone html page (or snippet to embed in your page). Render in stereo, for virtual reality with Google Cardboard. Animate in d3 style, for instance, if the x coordinates or color of a scatter plots changes. Animations / sequences, all scatter/quiver plot properties can be... -
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LostGrid
LostGrid is a powerful grid system built in PostCSS
Lost Grid is a powerful grid system built in PostCSS that works with any preprocessor and even vanilla CSS. LostGrid makes use of calc() to create stunning grids based on fractions you define without having to pass a lot of options. LostGrid relies on calc() to create the grid. Thus, LostGrid is limited to browsers that support calc(). The great thing is that calc() is widely supported in all current browsers and the LostGrid usage of calc() is supported as far back as IE9+. If using... -
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BitSail
BitSail is a distributed high-performance data integration engine
BitSail is ByteDance's open source data integration engine which is based on distributed architecture and provides high performance. It supports data synchronization between multiple heterogeneous data sources, and provides global data integration solutions in batch, streaming, and incremental scenarios. At present, it serves almost all business lines in ByteDance, such as Douyin, Toutiao, etc., and synchronizes hundreds of trillions of data every day. BitSail has been widely used and... -
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MessyTimeSeries.jl
A Julia implementation of basic tools for time series analysis
A Julia implementation of basic tools for time series analysis compatible with incomplete data. Advanced estimation and validation algorithms are included in MessyTimeSeriesOptim. -
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The Python Computer Graphics Kit is a collection of Python modules that contain the basic types and functions to be able to create 3D computer graphics images (focusing on Pixar's RenderMan interface).
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Transporter
Sync data between persistence engines, like ETL only not stodgy
Compose Transporter helps with database transformations from one store to another. It can also sync from one to another or several stores. This version officially only supports the mongodb and postgresql adaptors. Support for other DBs will be added later on. Other adaptors may or may not work. You're encouraged to still use v0.5.2 for non mongo/postgres migrations. Transporter allows the user to configure a number of data adaptors as sources or sinks. These can be databases, files or other... -
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DotNET.jl
This package provides interoperability between Julia and .NET apps
This package provides interoperability between Julia and Common Language Runtime, the execution engine of .NET applications. Many languages run on CLR, including C#, Visual Basic .NET and PowerShell. -
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ReinforcementLearningAnIntroduction.jl
Julia code for the book Reinforcement Learning An Introduction
This project provides the Julia code to generate figures in the book Reinforcement Learning: An Introduction(2nd). One of our main goals is to help users understand the basic concepts of reinforcement learning from an engineer's perspective. Once you have grasped how different components are organized, you're ready to explore a wide variety of modern deep reinforcement learning algorithms in ReinforcementLearningZoo.jl. -
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RigidBodyDynamics.jl
Julia implementation of various rigid body dynamics
RigidBodyDynamics.jl is a rigid body dynamics library in pure Julia. It aims to be user friendly and performant, but also generic in the sense that the algorithms can be called with inputs of any (suitable) scalar types. This means that if fast numeric dynamics evaluations are required, a user can supply Float64 or Float32 inputs. However, if symbolic quantities are desired for analysis purposes, they can be obtained by calling the algorithms with e.g. SymPy.Sym inputs. If gradients are... -
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Davinci
Davinci is a DVsaaS (Data Visualization as a Service) Platform
Davinci is oriented towards product managers, business people, data engineers, data analysts, data scientists, etc. It aims to provide a one-stop data visualization solution, which could be both independently used as a public cloud/private cloud and integrated into third-party systems as plugin. A simple configuration on Davinci UI can meet multiple visualization requirements. It also supports other visualization features like advanced interaction, industry analysis, pattern searching,... -
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IPyPublish
Workflow for creating and editing publication ready scientific reports
A program for creating and editing publication-ready scientific reports and presentations, from one or more Jupyter Notebooks. Dynamically (and reproducibly) explore data, run code, and output the results. Dynamically edit and visualize the basic components of the document (text, math, figures, tables, references, citations, etc). Have precise control over what elements are output to the final document and how they are layed out and typeset. Also be able to output the same source document to... -
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CNN Explainer
Learning Convolutional Neural Networks with Interactive Visualization
In machine learning, a classifier assigns a class label to a data point. For example, an image classifier produces a class label (e.g, bird, plane) for what objects exist within an image. A convolutional neural network, or CNN for short, is a type of classifier, which excels at solving this problem! A CNN is a neural network: an algorithm used to recognize patterns in data. Neural Networks in general are composed of a collection of neurons that are organized in layers, each with their own... -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
Crystalsim is a simple freeware program with a neat graphical user interface for X-ray diffraction (XRD) data analysis . It can simulates all possible {hkl} planes data for the selected crystal. Crystallographic Information File (.cif) can also be used. Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta,... -
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Newsvendor Model Simulation Spreadsheet
Excel Spreadsheet Model for Single Period Inventory Problems
The spreadsheet (Excel) of a single-period inventory model with stochastic demand can be used as a simulation tool for engineering education or Decision Support System. Based on spreadsheet techniques and examples described in the following sources: Albright S. C., & Winston W. L. (2005). Spreadsheet modeling and applications: essentials of practical management science, South-Western Pub. Albright, S. C. W. C., Winston, W., & Zappe, C. (2010). Data analysis and decision making. Cengage... -
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React-Datasheet
Excel-like data grid (table) component for React
This small component allows you to integrate an excel-like datasheet. By default, the spreadsheet handles keyboard navigation and copy-pasting of cells. This example computes expression underneath using mathjs. On an invalid expression, the cell changes color to show the error. Note that react-datasheet does not handle the validation nor the formula computation. Custom renderers allow you to add significant new capabilities to your sheets without requiring changes to react-datagrid itself.... -
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JuliaFEM.jl
The JuliaFEM software library is a framework
The JuliaFEM software library is a framework that allows for the distributed processing of large Finite Element Models across clusters of computers using simple programming models. It is designed to scale up from single servers to thousands of machines, each offering local computation and storage. The JuliaFEM software library is a framework that allows for the distributed processing of large Finite Element Models across clusters of computers using simple programming models. It is designed... -
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geoStarsLib - geodetic library
Geodesy based library (geodetic and geocentric functions)
geoStarsLib has functions for dealing with many geodesy-based problems found in positioning, pointing, and surveying situations. It is useful to determine absolute position on the earth, pointing vectors, coordinate transformations, and other functions. -
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An introduction to Data Analysis in R
A guide for learning the basic tools on data anaylisis with R
An Introduction to Data Analysis in R [Book] A guide for learning the basic tools on data anaylisis: process, visualize and learn from your data using R programming. This repository holds the necessary data sets for the book "An introduction to Data Analysis in R", to be published by Springer series Use R!. The book can be purchased in XXX. The book is meant as an introductory guide to manipulate data sets in the Big Data paradigm. One of the main goals of this book is to take the...
