Showing 8 open source projects for "sbml"

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  • 1
    SBML Layout: Graphical SBML Annotations
    The SBMLLayout Project provides libraries and tools for handling layout and render information of SBML Models. Supported are SBML Layout / Render Extension, CellDesigner annotations and JDesigner annotations.
    Downloads: 0 This Week
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  • 2
    SBML2LaTeX

    SBML2LaTeX

    A documentation and report generator for systems biological models

    ...The purpose of SBML2LATEX is to provide a way to read the contents of XML-based SBML files. This is helpful and important for, e.g., error detection, proofreading and model communication.
    Downloads: 0 This Week
    Last Update:
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  • 3
    RoadRunner represents a state-of-the-art simulation library for SBML models. It is fast, portable and accurate. This projects hosts the library and tools using the library.
    Downloads: 0 This Week
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  • 4
    Interactive SBML Simulation Tool
    This project hosts the 'Simulation Tool', an extensible, interactive environment for carrying out simulation experiments of SBML models. This project can use RoadRunner or SBW enabled simulators to carry out simulations.
    Downloads: 0 This Week
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  • 5
    VANTED
    VANTED - Visualization and Analysis of NeTworks containing Experimental Data At SourceForge the VANTED development history is preserved, only limited amount of development will proceed here. Please head on to the most recent developments, which can be observed at www.vanted.org.
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    Downloads: 2 This Week
    Last Update:
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  • 6
    Create, check, annotate, merge, diff, split SBML (System Biology Markup Lanugage) documents. The latest version of semanticSBML is webbased with a RESTful interface.
    Downloads: 1 This Week
    Last Update:
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  • 7
    Arcadia is a light-weight, cross-platform, C++ desktop application designed for visualizing biological networks such as metabolic pathways.
    Downloads: 0 This Week
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  • 8
    compare-results

    compare-results

    Program comparing Simulation Results for the SBML TestSuite

    Compare SBML Test Suite Results =============================== The [SBML Testsuite](http://sbml.org/Facilities/Online_SBML_Test_Suite) allows developers of ODE based simulators to test their implementation against a large number of test cases that test a wide aspect of the [SBML Specifications](http://sbml.org/Documents/Specifications).
    Downloads: 5 This Week
    Last Update:
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