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ChiMera: An easy-to-use pipeline for Genome-based Metabolic Network re
...Our goals:
Produce an organism-specific model based on the CarveMe algorithm
Manage the model and perform growth predictions with COBRApy
Create visualization for the metabolic network using PSAMM and Escher
Add pathway information to metabolic maps using in house algorithm
Perform single and double, gene and reaction, knockout in the organism
Escher is a collection of libraries for X Window System written purely
in Java. It consists of an X11 protocol implementation (similar to
xlib for C/C++), and its extensions such as GLX, the OpenGL rendering
protocol.