Showing 171 open source projects for "types"

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  • 1
    SmartRoot

    SmartRoot

    Semi-automated root image analysis software

    SmartRoot is a semi-automated image analysis software which streamlines the quantification of root growth and architecture for complex root systems. The software combines a vectorial representation of root objects with a powerful tracing algorithm which accommodates to a wide range of image source and quality. The software supports a sampling-based analysis of root system images, in which detailed information is collected on a limited number of roots selected by the user according to...
    Downloads: 1 This Week
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  • 2
    PMM-Lab

    PMM-Lab

    Predictive Microbial Modeling plug-in for KNIME

    ...Users can apply PMM-Lab to proprietary or public data and create bacterial growth / survival / inactivation models. The framework can easily be extended to other model types, e.g. growth/no-growth boundary models. PMM-Lab has been initiated and provided by the Federal Institute for Risk Assessment - BfR (Berlin, Germany). The software is in Beta status. Before using the software you have to read and accept the license and disclaimer (https://sourceforge.net/p/pmmlab/wiki/Disclaimer/). If you do not agree, do not use this software.
    Downloads: 0 This Week
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  • 3

    iCubing

    Several OLAP algorithms, data structures and HPC OLAP versions

    ...In this direction, we implement iCubing project with several multidimensional data cube approaches for cube indexing, querying, updating and mining. There are also several cube types, i.e. alphanumeric cubes, text cubes with unstructured data and geo cube with geo types, dimensions, measures and hierarchies, so the OLAP area continues a hard challenge after more than 20 years of the seminal paper of Jim Gray et al. in 1997. Our team has more than 15 years of experience in developing OLAP kernels.
    Downloads: 0 This Week
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  • 4

    Bamformatics

    Toolkit and GUI for sequencing data analysis

    The Bamformatics project aims to provide a coherent and consistent approach to analysis of high-throughput sequencing data. Its toolkit includes, among others, programs to identify variants and to compute various types genomic tracks. It also provides a graphical user interface to facilitate general bioinformatic workflows. The project wiki contains further details.
    Downloads: 0 This Week
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  • 5

    Py3DN

    Morphometric analysis and visualization of the 3D structure of neurons

    ...It allows the construction of mathematical representations of neuronal topology, visualization and a variety of morphometric analysis on the neuronal structures. Above all, it provides a flexible environment where new types of analyses can be easily set up allowing total freedom to test new hypotheses. The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. Py3DN is described in the paper: Aguiar P et al, "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics, 2013, 11(4):393-403 doi: 10.1007/s12021-013-9188-z
    Downloads: 0 This Week
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  • 6
    PHPlot

    PHPlot

    A PHP class for creating graphs, plots, charts

    ...It works with PHP5 and the PHP GD extension to produce PNG, GIF, or JPEG images. TrueType fonts (TTF) are optional, or built-in GD fonts can be used. The available plot types include: area, bars, line/points, lines, pie, points, squared, stacked-bars, and thin bar-line. Labels, tick marks, plot legend, and X/Y axes and more are all configurable. Images can be imported as a background, multiple graphs can be drawn on one image, and images can be saved to disk or returned to a browser.
    Downloads: 26 This Week
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  • 7
    circlize

    circlize

    Circular visualization in R

    circlize is an R package for creating circular visualizations (plots laid out in circular coordinate systems) in a very flexible way. It implements many types of plots using circular layouts: chord diagrams, circular heatmaps, arcs/links between sectors, genomic data visualization, etc. It provides low-level drawing functions as well as high-level functions to build complex visualizations. It’s often used in genomics, network analysis, or other fields where relationships among categories or entities can be nicely displayed in a circular fashion. ...
    Downloads: 0 This Week
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  • 8

    Relation Tags

    Source code for be able to use Relation Tags.

    Source code for be able to use Relation Tags. It is part of project VocabularyMem but can be used separately. Relation Tags are tags which can be relationed together . For example tag "Paris" and tag "France" can be relationed with a relation "is part of". This code is created from 0 and is able to define which type of relation we use, using most elemental mathematic properties. It is strongly recommended to read "Relation Tags guide for programmers". Inside source zip, also contains dialogs...
    Downloads: 0 This Week
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  • 9
    GWT Highcharts
    GWT Highcharts is a freely available open source library that provides an elegant and feature complete approach for including Highcharts and Highstock visualizations within a GWT application using pure Java code. Note: the source code for this project is now being maintained on GitHub here: https://github.com/squinn/gwt-highcharts
    Downloads: 0 This Week
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  • 10
    BIRT Report Designer

    BIRT Report Designer

    Open Source Reporting & Data Visualization Platform

    BIRT is an open source technology platform used to create data visualizations and reports that can be embedded into rich client and web applications. Developers who use BIRT Designer are able to access information from multiple data sources easily and quickly in order to create reports and applications with stunning data visualizations. Actuate now provides a free report server, BIRT iHub F-Type, to deploy BIRT content so developers don't have to build their own infrastructure. With a...
    Downloads: 5 This Week
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  • 11
    PixLib
    This library aims to provide support for D-dimensional images in Java and to enable high-level implementation of algorithms in dimensionally-invariant manner. Major features: the dimensionality and the access to primitive data types are abstracted.
    Downloads: 0 This Week
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  • 12
    IC-Station Productivity Suite
    This is a collection of (hopefully) useful productivity enhancements of Mentor Graphics IC-Station tools
    Downloads: 0 This Week
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  • 13
    ...webStraktor relies on the Apache HttpClient for retrieving content via the HTTP protocol. It adheres to the Robots Exclusion Protocol and it can be configured to operate in an anonymous way by connecting to the predominant types of web proxy servers. webStraktor extends the functionality of web crawlers, spiders or bots by integrating scraping and crawling capabilities.
    Downloads: 0 This Week
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  • 14
    LAVA for AFM

    LAVA for AFM

    Lloyd's Algorithm-based Volumetric Analysis for AFM Images

    ...As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of image analysis, such as fluorescence intensity. Work is in progress to provide three-channel functionality, allowing comparison of relative intensity of red, green, and blue channels in multi-color images.
    Downloads: 0 This Week
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  • 15
    GPU Edge Detector

    GPU Edge Detector

    GPU Interactive Program For Edge detection

    ...Each algorithm also has an OpenCV counterpart which is the closest one in terms of speed. This project is partly based on the Sobel Filter sample available as part of the CUDA SDK. This project also partly uses the OpenCV library to load different types of image. This program includes: Prewitt filter, Roberts Cross, Canny edge detector and finally Sobel filter with the ability to modify some variables such as sigma in Canny and see the result in real-time. To access and download the code, please review the code section. (The code section is currently close until our article gets published) Commiting publicly to the project is currently closed but feel free to email us. ...
    Downloads: 0 This Week
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  • 16
    wxChaos

    wxChaos

    An open source fractal generator extensible with scripts.

    wxChaos aims to be relatively simple and yet providing the user with many predefined fractals and algorithms to create beautiful results in less time. It also allows the user to create new fractals with user formulas and user scripts.
    Downloads: 0 This Week
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  • 17
    sigrok
    The sigrok project aims at creating a portable, cross-platform, Free/Libre/Open-Source signal analysis software suite that supports various device types, such as logic analyzers, MSOs, oscilloscopes, multimeters, LCR meters, sound level meters, thermometers, anemometers, light meters, dataloggers, function generators, power supplies, GPIB interfaces, and more.
    Downloads: 2 This Week
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  • 18

    MolBioLib

    C++11 framework for rapid develop and deploy of bioinformatic tasks.

    MolBioLib is a compact, portable, and extensively tested C++11 software framework and set of applications tailored to the demands of next-generation sequencing data and applicable to many other applications. MolBioLib is designed to work with common file formats and data types used both in genomic analysis and general data analysis. A central relational-database-like Table class is a flexible and powerful object to intuitively represent and work with a wide variety of tabular datasets, ranging from alignment data to annotations. MolBioLib includes programs to perform a wide variety of analysis tasks such as computing read coverage, annotating genomic intervals, and novel peak calling with a wavelet algorithm. ...
    Downloads: 0 This Week
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  • 19
    Toolsverse ETL Framework

    Toolsverse ETL Framework

    Open source Extract Transform Load engine written in Java

    ETL Framework is a standalone Extract Transform Load engine written in Java. It includes executables for all major platforms and can be easily integrated into other applications. Key Features: * embeddable, open source and free * fast and scalable * uses target database features to do transformations and loads * manual and automatic data mapping * data streaming * bulk data loads * data quality features using SQL, JavaScript? and regex * data transformations Requirements *...
    Downloads: 0 This Week
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  • 20

    FortGrapher

    InLine Plot with Fortran

    This is a Fortran Module that merges the performance of the computation of the Fortran with the power of a Python Package called Matplotlib plot the data computed by your fortran code. It allows you to divide you data into groups of datafiles and each group is stored on its own directory. It allows you to create different types of plotting files such as, PNG file for each datafile and PDF and MPEG files for each group of datafiles. It works with FORMATTED and UNFORMATTED fortran datafiles. When you call the main subroutine in this module which is called FORTPLOT, it creates a python coded file that you can execute it at any time to get the plots and take a decision about continue the run or halt it. ...
    Downloads: 0 This Week
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  • 21
    Flare

    Flare

    Flare is an ActionScript library for creating visualizations

    Flare is an ActionScript library for creating data visualizations in the Flash Player. It spans from simple charts (bar, line, pie, etc.) up to complex interactive and animated visualizations. It supports data management, visual encoding, animations, and interactive behaviors so that users/developers can build expressive, dynamic visual data displays in Flash. Flare is an ActionScript library for creating visualizations that run in the Adobe Flash Player. From basic charts and graphs to...
    Downloads: 0 This Week
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  • 22
    Firefly UML

    Firefly UML

    A free, easy-to-use and user-friendly Java-based UML editor.

    Firefly UML is a 100% pure Java application designed to create and edit UML conform diagrams. With class diagrams, sequence and instance diagrams, Firefly UML provides a solid selection from the vast range of existing UML diagram types. Firefly UML is really easy to learn as it provides you multiple ways of access to the same function - be it mouse action, hotkey, context menu or toolbar icon. And the best thing is: once you have learned how to handle one type of diagram, you also have learned how to deal with the other diagram types, because they all follow the exactly same user interaction patterns. ...
    Downloads: 0 This Week
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  • 23
    Description Reveal Desktop is a web 2.0 data entry tool applicable for archaeological or other types of hierarchical relationships. Is makes use of the following open source tools and frameworks. Extjs 3.3 qwikiOfice php 5+ apache2 mysql
    Downloads: 0 This Week
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  • 24
    UDAV is program for data arrays visualization based on MathGL library. It support wide spectrum of graphics, simple script language and visual data handling and editing.
    Downloads: 0 This Week
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  • 25
    Basic emulator of machine with types
    Downloads: 0 This Week
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