Showing 301 open source projects for "data capture framework"

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  • 1
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
    Downloads: 0 This Week
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  • 2
    TensorFlow.jl

    TensorFlow.jl

    A Julia wrapper for TensorFlow

    A wrapper around TensorFlow, a popular open-source machine learning framework from Google.
    Downloads: 0 This Week
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  • 3
    CueMol

    CueMol

    CueMol - Molecular Visualization Framework

    CueMol - Molecular Visualization Framework based on OpenGL, Mozilla XULRunner, and javascript
    Downloads: 4 This Week
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  • 4
    SIVIC
    SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
    Downloads: 10 This Week
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  • 5
    Wally

    Wally

    Distributed Stream Processing

    Wally is a fast-stream-processing framework. Wally makes it easy to react to data in real-time. By eliminating infrastructure complexity, going from prototype to production has never been simpler. When we set out to build Wally, we had several high-level goals in mind. Create a dependable and resilient distributed computing framework. Take care of the complexities of distributed computing "plumbing," allowing developers to focus on their business logic.
    Downloads: 1 This Week
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  • 6
    Alevin2

    Alevin2

    Tool for the evaluation of ALgorithms for Embedding VIrtual Networks

    ALgorithms for Embedding VIrtual Networks Software to evaluate Virtual Network Embedding Algorithms.
    Downloads: 0 This Week
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  • 7
    JHotDraw is a two-dimensional graphics framework for structured drawing editors that is written in Java. It is based on Erich Gamma's JHotDraw, which is copyright 1996, 1997 by IFA Informatik and Erich Gamma.
    Downloads: 2 This Week
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  • 8

    MarDRe

    MapReduce-based tool to remove duplicate DNA reads

    MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. Written in pure Java to maximize cross-platform compatibility, MarDRe is built upon the open-source Apache Hadoop project, the most popular distributed computing framework for Big Data processing.
    Downloads: 1 This Week
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  • 9

    HSRA

    Hadoop spliced read aligner for RNA-seq data

    ...This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. HSRA currently supports single-end and paired-end read alignments from FASTQ/FASTA datasets. Moreover, our tool uses the Hadoop Sequence Parser (HSP) library (link above) to efficiently read the input datasets stored on the Hadoop Distributed File System (HDFS), being able to process datasets compressed with Gzip and BZip2 codecs.
    Downloads: 0 This Week
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  • 10
    fooltrader

    fooltrader

    Quant framework for stock

    Build a standard data schema, and then implement various connectors to import systems you are familiar with for analysis. fooltrader is a quantitative analysis trading system designed using big data technology, including data capture, cleaning, structuring, calculation, display, backtesting and trading. Its goal is to provide a unified framework for the whole market (stock, futures, bonds, foreign exchange, digital currency, macroeconomics, etc.) for research, backtesting, forecasting, and trading. ...
    Downloads: 1 This Week
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  • 11
    xeogl

    xeogl

    A WebGL-based 3D engine for technical visualization

    xeogl is an open source JavaScript library from xeolabs for 3D model visualization on WebGL. It gives you tools to create interactive 3D worlds in your browser. Load models from formats like glTF or OBJ, or generate them programmatically. Navigate them with the camera and script them with Javascript, to build compelling 3D presentations. Load multiple models. Isolate/move/emphasize objects. Camera navigation controls. Camera animations (flyto, follow, path etc). Emphasis effects (wireframe,...
    Downloads: 0 This Week
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  • 12
    ChunJun

    ChunJun

    A data integration framework

    ChunJun is a distributed integration framework, and currently is based on Apache Flink. It was initially known as FlinkX and renamed ChunJun on February 22, 2022. It can realize data synchronization and calculation between various heterogeneous data sources. ChunJun has been deployed and running stably in thousands of companies so far. Based on the real-time computing engine--Flink, and supports JSON template and SQL script configuration tasks.
    Downloads: 0 This Week
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  • 13
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the...
    Downloads: 1 This Week
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  • 14
    A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
    Downloads: 0 This Week
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  • 15
    Merlin.jl

    Merlin.jl

    Deep Learning for Julia

    Merlin is a deep learning framework written in Julia. It aims to provide a fast, flexible and compact deep learning library for machine learning. Merlin is tested against Julia 1.0 on Linux, OS X, and Windows (x64).
    Downloads: 0 This Week
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  • 16
    A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
    Downloads: 0 This Week
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  • 17

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. ...
    Downloads: 0 This Week
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  • 18

    Random Bits Forest

    RBF: a Strong Classifier/Regressor for Big Data

    ...It first generates and selects ~10,000 small three-layer threshold random neural networks as basis by gradient boosting scheme. These binary basis are then feed into a modified random forest algorithm to obtain predictions. In conclusion, RBF is a novel framework that performs strongly especially on data with large size.
    Downloads: 0 This Week
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  • 19
    GeOxygene
    GeOxygene aims at providing an open framework which implements OGC/ISO specifications for the development and deployment of geographic (GIS) applications. It is a open source contribution of the COGIT lab. at the IGN (the French National Mapping Agency).
    Downloads: 0 This Week
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  • 20
    Airbus A340 glass cockpit. Build upon an open framework for creating an distributed glasscockpit.
    Downloads: 0 This Week
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  • 21
    PMM-Lab

    PMM-Lab

    Predictive Microbial Modeling plug-in for KNIME

    PMM-Lab is an open-source extension to the Konstanz Information Miner (KNIME). It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public data and create bacterial growth / survival / inactivation models. The framework can easily be extended to other model types, e.g. growth/no-growth boundary models. ...
    Downloads: 0 This Week
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  • 22

    Random Bits Regression

    Random Bits Regression is a strong general predictor.

    ...The fast-speed nature of our method not only allows big data analysis but also enables real-time recognition and predictions. The RBR framework also hints the mechanism of brain function and leads to a "wide learning" hypothesis. We believe that this method will make a great impact and enable many downstream applications.
    Downloads: 0 This Week
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  • 23
    Taurus

    Taurus

    A python based User Interface library.

    The Taurus Project has *moved* to: https://github.com/taurus-org/taurus This SourceForge page is *outdated* and kept for historical reference only. Taurus is a python framework for control and data acquisition CLIs and GUIs in scientific/industrial environments. It supports multiple control systems or data sources: Tango, EPICS, ... New control system libraries and data sources can be integrated through plugins.
    Downloads: 0 This Week
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  • 24
    Gimias

    Gimias

    Graphical Interface for Medical Image Analysis and Simulation

    GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.
    Downloads: 1 This Week
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  • 25

    frameworkforwebdataanalytics

    This repository is from my degree project titled "Framework for Web Data Analytics"

    Downloads: 0 This Week
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