Search Results for "bcftools-windows"
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Showing 389 open source projects for "bcftools-windows"
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Krylov.jl
A Julia Basket of Hand-Picked Krylov Methods
If you use Krylov.jl in your work, please cite it using the metadata given in CITATION.cff. -
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Makie
Interactive data visualizations and plotting in Julia
Makie is an interactive data visualization and plotting ecosystem for the Julia programming language, available on Windows, Linux, and Mac. The backend packages GLMakie, WGLMakie, CairoMakie and RPRMakie add different functionalities: You can use Makie to interactively explore your data and create simple GUIs in native Windows or web browsers, export high-quality vector graphics or even raytrace with physically accurate lighting. Choose one or more backend packages: GLMakie (interactive OpenGL in native OS windows), WGLMakie (interactive WebGL in browsers, IDEs, notebooks), CairoMakie (static 2D vector graphics and images), and RPRMakie (raytracing). ... -
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Rocket.jl
Functional reactive programming extensions library for Julia
Rocket.jl is a Julia package for reactive programming using Observables, to make it easier to work with asynchronous data. Rocket.jl has been designed with a focus on performance and modularity. -
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Mixed-effects models in Julia
A Julia package for fitting (statistical) mixed-effects models
This package defines linear mixed models (LinearMixedModel) and generalized linear mixed models (GeneralizedLinearMixedModel). Users can use the abstraction for statistical model API to build, fit (fit/fit!), and query the fitted models. A mixed-effects model is a statistical model for a response variable as a function of one or more covariates. For a categorical covariate the coefficients associated with the levels of the covariate are sometimes called effects, as in "the effect of using... -
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Circuitscape.jl
Algorithms from circuit theory to predict connectivity
Circuitscape is an open-source program that uses circuit theory to model connectivity in heterogeneous landscapes. Its most common applications include modeling the movement and gene flow of plants and animals, as well as identifying areas important for connectivity conservation. The new Circuitscape is built entirely in the Julia language, a new programming language for technical computing. Julia is built from the ground up to be fast. As such, this offers a number of advantages over the... -
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NeuralOperators.jl
DeepONets, Neural Operators, Physics-Informed Neural Ops in Julia
Neural operator is a novel deep learning architecture. It learns an operator, which is a mapping between infinite-dimensional function spaces. It can be used to resolve partial differential equations (PDE). Instead of solving by finite element method, a PDE problem can be resolved by training a neural network to learn an operator mapping from infinite-dimensional space (u, t) to infinite-dimensional space f(u, t). Neural operator learns a continuous function between two continuous function... -
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PowerSystems.jl
Data structures in Julia to enable power systems analysis
The PowerSystems.jl package provides a rigorous data model using Julia structures to enable power systems analysis and modeling. In addition to stand-alone system analysis tools and data model building, the PowerSystems.jl package is used as the foundational data container for the PowerSimulations.jl and PowerSimulationsDynamics.jl packages. PowerSystems.jl supports a limited number of data file formats for parsing. -
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PythonCall & JuliaCall
Python and Julia in harmony
Bringing Python® and Julia together in seamless harmony. Call Python code from Julia and Julia code from Python via a symmetric interface. Simple syntax, so the Python code looks like Python and the Julia code looks like Julia. Intuitive and flexible conversions between Julia and Python: anything can be converted, you are in control. Fast non-copying conversion of numeric arrays in either direction: modify Python arrays (e.g. bytes, array. array, numpy.ndarray) from Julia or Julia arrays... -
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RuntimeGeneratedFunctions.jl
Functions generated at runtime without world-age issues or overhead
RuntimeGeneratedFunctions are functions generated at runtime without world-age issues and with the full performance of a standard Julia anonymous function. This builds functions in a way that avoids eval. For technical reasons, RuntimeGeneratedFunctions needs to cache the function expression in a global variable within some module. This is normally transparent to the user, but if the RuntimeGeneratedFunction is evaluated during module precompilation, the cache module must be explicitly set... -
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SymbolicNumericIntegration.jl
SymbolicNumericIntegration.jl: Symbolic-Numerics for Solving Integrals
SymbolicNumericIntegration.jl is a hybrid symbolic/numerical integration package that works on the Julia Symbolics expressions. -
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BAT.jl
A Bayesian Analysis Toolkit in Julia
Welcome to BAT, a Bayesian analysis toolkit in Julia. BAT.jl offers a variety of posterior sampling, mode estimation and integration algorithms, supplemented by plotting recipes and I/O functionality. BAT.jl originated as a rewrite/redesign of BAT, the Bayesian Analysis Toolkit in C++. BAT.jl now offer a different set of functionality and a wider variety of algorithms than its C++ predecessor. -
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CSV
Utility library for working with CSV and other delimited files
Welcome to CSV.jl! A pure-Julia package for handling delimited text data, be it comma-delimited (csv), tab-delimited (tsv), or otherwise. A fast, flexible delimited file reader/writer for Julia. -
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CommonMark.jl
A CommonMark-compliant parser for Julia
A CommonMark-compliant parser for Julia. -
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ModelingToolkitStandardLibrary.jl
A standard library of components to model the world and beyond
The ModelingToolkit Standard Library is a standard library of components to model the world and beyond. -
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ProbNumDiffEq.jl
Probabilistic Numerical Differential Equation solvers via Bayesian fil
ProbNumDiffEq.jl provides probabilistic numerical ODE solvers to the DifferentialEquations.jl ecosystem. The implemented ODE filters solve differential equations via Bayesian filtering and smoothing. The filters compute not just a single point estimate of the true solution, but a posterior distribution that contains an estimate of its numerical approximation error. -
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LatticeQCD.jl
A native Julia code for lattice QCD with dynamical fermions in 4D
This code enables you to perform lattice QCD calculations! A native Julia code for Lattice QCD. -
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LinearOperators.jl
Linear Operators for Julia
Operators behave like matrices (with some exceptions - see below) but are defined by their effect when applied to a vector. They can be transposed, conjugated, or combined with other operators cheaply. The costly operation is deferred until multiplied with a vector. -
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DynamicQuantities.jl
Lightweight + fast physical quantities in Julia
DynamicQuantities defines a simple statically-typed Quantity type for Julia. Physical dimensions are stored as a value, as opposed to a parametric type, as in Unitful.jl. This can greatly improve both runtime performance, by avoiding type instabilities, and startup time, as it avoids overspecializing methods. -
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ReachabilityAnalysis.jl
Compute reachable states of dynamical systems
Reachability analysis is concerned with computing rigorous approximations of the set of states reachable by a dynamical system. In the scope of this package are systems modeled by continuous or hybrid dynamical systems, where the dynamics change with discrete events. Systems are modeled by ordinary differential equations (ODEs) or semi-discrete partial differential equations (PDEs), with uncertain initial states, uncertain parameters or non-deterministic inputs. -
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FinEtools.jl
Finite Element tools in Julia
FinEtools is a package for basic operations on finite element meshes: Construction, modification, selection, and evaluation of quantities defined on a mesh. Utilities are provided for maintaining mesh-based data (fields), for defining normals and loads, for working with physical units and coordinate systems, and for integrating over finite element meshes. -
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Catalyst.jl
Chemical reaction network and systems biology interface
Catalyst.jl is a symbolic modeling package for analysis and high-performance simulation of chemical reaction networks. Catalyst defines symbolic ReactionSystems, which can be created programmatically or easily specified using Catalyst's domain-specific language (DSL). Leveraging ModelingToolkit and Symbolics.jl, Catalyst enables large-scale simulations through auto-vectorization and parallelism. Symbolic ReactionSystems can be used to generate ModelingToolkit-based models, allowing the easy... -
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OnlineStats.jl
Single-pass algorithms for statistics
OnlineStats does statistics and data visualization for big/streaming data via online algorithms. High-performance single-pass algorithms for statistics and data viz. Updated one observation at a time. Algorithms use O(1) memory. Algorithms use O(1) memory. -
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NNlib.jl
Neural Network primitives with multiple backends
This package provides a library of functions useful for neural networks, such as softmax, sigmoid, batched multiplication, convolutions and pooling. Many of these are used by Flux.jl, which loads this package, but they may be used independently. -
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Finch.jl
Sparse tensors in Julia and more
Finch is a cutting-edge Julia-to-Julia compiler specially designed for optimizing loop nests over sparse or structured multidimensional arrays. Finch empowers users to write conventional for loops which are transformed behind-the-scenes into fast sparse code. -
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HomotopyContinuation.jl
A Julia package for solving systems of polynomials
HomotopyContinuation.jl is a Julia package for solving systems of polynomial equations by numerical homotopy continuation. Many models in the sciences and engineering are expressed as sets of real solutions to systems of polynomial equations. We can optimize any objective whose gradient is an algebraic function using homotopy methods by computing all critical points of the objective function. An important special case is when the objective function is the euclidean distance to a given point....
