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Showing 590 open source projects for "compiler python linux"
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Jupyter Dock
Perform molecular docking protocols interactively
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results. These notebooks are Python 3 compatible. Each protocol and Jupyter notebook has its own test folder for testing and reproducibility evaluation. For all notebooks, the demonstration includes the use of AutoDock Vina and Ledock. When available, some alternatives are mentioned in the protocol. Jupyter Dock's initial goal... -
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pydatascope
Software oscilloscope using Python and tkinter
Software oscilloscope using Python and tkinter. Supports multiple sources: socket, file, audio, USB. Displays data by samples, time or frequency. Scales the input automatically or manually. -
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ML workspace
All-in-one web-based IDE specialized for machine learning
All-in-one web-based development environment for machine learning. The ML workspace is an all-in-one web-based IDE specialized for machine learning and data science. It is simple to deploy and gets you started within minutes to productively built ML solutions on your own machines. This workspace is the ultimate tool for developers preloaded with a variety of popular data science libraries (e.g., Tensorflow, PyTorch, Keras, Sklearn) and dev tools (e.g., Jupyter, VS Code, Tensorboard)... -
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Kale
Kubeflow’s superfood for Data Scientists
KALE (Kubeflow Automated pipeLines Engine) is a project that aims at simplifying the Data Science experience of deploying Kubeflow Pipelines workflows. Kubeflow is a great platform for orchestrating complex workflows on top Kubernetes and Kubeflow Pipeline provides the mean to create reusable components that can be executed as part of workflows. The self-service nature of Kubeflow make it extremely appealing for Data Science use, at it provides an easy access to advanced distributed jobs... -
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Open Grid Analysis and Display System
OpenGrADS provides extensions and interfaces for GrADS.
The Grid Analysis and Display System (GrADS) is an interactive desktop tool for easy access, manipulation, and visualization of earth science data. The OpenGrADS Project seeks to develop advanced interfaces and extensions based on the main GrADS engine. -
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TransPose
PyTorch Implementation for "TransPose, Keypoint localization
TransPose is a human pose estimation model based on a CNN feature extractor, a Transformer Encoder, and a prediction head. Given an image, the attention layers built in Transformer can efficiently capture long-range spatial relationships between keypoints and explain what dependencies the predicted keypoints locations highly rely on. -
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Data Science Notes
Curated collection of data science learning materials
Data Science Notes is a large, curated collection of data science learning materials, with explanations, code snippets, and structured notes across the typical end-to-end workflow. It spans foundational math and statistics through data wrangling, visualization, machine learning, and practical project organization. The content emphasizes hands-on understanding by pairing narrative notes with runnable examples, making it useful for both self-study and classroom settings. Because it aggregates... -
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Learn Julia the Hard Way
Learn Julia the hard way
The Julia base package is pretty big, although at the same time, there are lots of other packages around to expand it with. The result is that on the whole, it is impossible to give a thorough overview of all that Julia can do in just a few brief exercises. Therefore, I had to adopt a little 'bias', or 'slant' if you please, in deciding what to focus on and what to ignore. Julia is a technical computing language, although it does have the capabilities of any general-purpose language and... -
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ccplot
CloudSat and CALIPSO plotting tool
ccplot is an open source command-line program for plotting profile, layer and earth view data sets from CloudSat, CALIPSO and Aqua MODIS products. -
Inspections+ Mobile forms for Dynamics 365 - Resco.netEquip your frontline teams with a robust digital solution to simplify data collection and reporting. Handle inspections and audits effortlessly, even in remote locations, and create comprehensive reports on the spot, all integrated with Dynamics 365.
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pycoQC
pycoQC computes metrics and generates Interactive QC plots
PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data. PycoQC relies on the sequencing_summary.txt file generated by Albacore and Guppy, but if needed it can also generate a summary file from basecalled fast5 files. The package supports 1D and 1D2 runs generated with Minion, Gridion and Promethion devices and basecalled with Albacore 1.2.1+ or Guppy 2.1.3+. PycoQC is written in pure Python3. Python 2 is not supported. -
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DEPRECATED - KVFinder
Cavity Detection PyMOL plugin
...[pyKVFinder] pyKVFinder is available in this Python Package Index (PyPI) repository, https://pypi.org/project/pyKVFinder and this GitHub repository, https://github.com/LBC-LNBio/pyKVFinder. Please read and cite the original paper pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science (10.1186/s12859-021-04519-4). -
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OpenFrames
Real-time interactive 3D graphics API for scientific simulations
OpenFrames has moved its primary development repository to GitHub! Everything else will follow. Get it at https://github.com/ravidavi/OpenFrames/wiki OpenFrames is an Application Programming Interface (API) that allows developers to provides the ability to add interactive 3D graphics to any scientific simulation. A simulation developer can use OpenFrames to specify what they want to visualize, without having to know any details of computer graphics programming. OpenFrames is currently... -
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Amazon SageMaker Examples
Jupyter notebooks that demonstrate how to build models using SageMaker
Welcome to Amazon SageMaker. This projects highlights example Jupyter notebooks for a variety of machine learning use cases that you can run in SageMaker. If you’re new to SageMaker we recommend starting with more feature-rich SageMaker Studio. It uses the familiar JupyterLab interface and has seamless integration with a variety of deep learning and data science environments and scalable compute resources for training, inference, and other ML operations. Studio offers teams and companies... -
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Jupytab
Display in Tableau data from Jupyter notebooks
Jupytab allows you to explore in Tableau data which is generated dynamically by a Jupyter Notebook. You can thus create Tableau data sources in a very flexible way using all the power of Python. This is achieved by having Tableau access data through a web server created by Jupytab. -
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GPlates
Interactive visualization of plate tectonics.
GPlates is a plate-tectonics program. Manipulate reconstructions of geological and paleo-geographic features through geological time. Interactively visualize vector, raster and volume data. PyGPlates is the GPlates Python library. Get fine-grained access to GPlates functionality in your Python scripts. -
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Optimus
Agile Data Preparation Workflows made easy with Pandas
Easily write code to clean, transform, explore and visualize data using Python. Process using a simple API, making it easy to use for newcomers. More than 100 functions to handle strings, process dates, urls and emails. Easily plot data from any size. Out-of-box functions to explore and fix data quality. Use the same code to process your data in your laptop or in a remote cluster of GPUs. -
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Spectral Python
A python module for hyperspectral image processing
Spectral Python (SPy) is a python package for reading, viewing, manipulating, and classifying hyperspectral image (HSI) data. SPy includes functions for clustering, dimensionality reduction, supervised classification, and more. -
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Forecasting Best Practices
Time Series Forecasting Best Practices & Examples
Time series forecasting is one of the most important topics in data science. Almost every business needs to predict the future in order to make better decisions and allocate resources more effectively. This repository provides examples and best practice guidelines for building forecasting solutions. The goal of this repository is to build a comprehensive set of tools and examples that leverage recent advances in forecasting algorithms to build solutions and operationalize them. Rather than... -
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repo2docker GitHub Action
A GitHub action to build data science environment images
Trigger repo2docker to build a Jupyter enabled Docker image from your GitHub repository and push this image to a Docker registry of your choice. This will automatically attempt to build an environment from configuration files found in your repository. Images generated by this action are automatically tagged with both latest and <SHA> corresponding to the relevant commit SHA on GitHub. Both tags are pushed to the Docker registry specified by the user. If an existing image with the latest tag... -
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QuiclickRNAseq
An integrated pipeline for RNA-seq analysis
Quiclick is a python framework for RNA-seq data analysis, including data trimming, mapping, counting and RNA editing analysis. -
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StellarGraph
Machine Learning on Graphs
StellarGraph is a Python library for machine learning on graphs and networks. The StellarGraph library offers state-of-the-art algorithms for graph machine learning, making it easy to discover patterns and answer questions about graph-structured data. It can solve many machine learning tasks. Graph-structured data represent entities as nodes (or vertices) and relationships between them as edges (or links), and can include data associated with either as attributes. For example, a graph can... -
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SageMaker Containers
Create SageMaker-compatible Docker containers
Amazon SageMaker is a fully managed service for data science and machine learning (ML) workflows. You can use Amazon SageMaker to simplify the process of building, training, and deploying ML models. To train a model, you can include your training script and dependencies in a Docker container that runs your training code. A container provides an effectively isolated environment, ensuring a consistent runtime and reliable training process. The SageMaker Training Toolkit can be easily added to... -
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Data Science at the Command Line
Data science at the command line
...You’ll learn how to combine small yet powerful command-line tools to quickly obtain, scrub, explore, and model your data. To get you started, author Jeroen Janssens provides a Docker image packed with over 100 Unix power tools, useful whether you work with Windows, macOS, or Linux. You’ll quickly discover why the command line is an agile, scalable, and extensible technology. Even if you’re comfortable processing data with Python or R, you’ll learn how to greatly improve your data science workflow by leveraging the command line’s power. -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
Crystalsim is a simple freeware program with a neat graphical user interface for X-ray diffraction (XRD) data analysis . It can simulates all possible {hkl} planes data for the selected crystal. Crystallographic Information File (.cif) can also be used. Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta,... -
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QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
