Search Results for "scientific"
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Showing 68 open source projects for "scientific"
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Gwyddion
Scanning probe microscopy data visualisation and analysis
A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis. -
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BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. About 50 different data formats are supported.
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Common Image Generator Interface (CIGI)
Industry standard communication with compliant image generators.
Software libraries and tools designed for implementation and testing of the Common Image Generator Interface (CIGI), an interface for communication between an image generator (IG) and host device in simulations. -
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Systems Biology Markup Language (SBML)
A file format for exchanging computational models in systems biology
The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more. -
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gputils is a collection of tools for Microchip PIC microcontrollers. Its goal is to be fully compatible with Microchip's tools, MPASM, MPLINK, and MPLIB.
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libgwyfile
Read and write Gwyddion GWY files
Libgwyfile is a small, embeddable library for reading and writing of Gwyddion GWY files as foreign data. This means independently of Gwyddon and without adopting its data object model. -
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igspread
converts between IGES file and text file
Command-line interface program that converts between IGES file and text file. IGES files are compatible with most of CAD systems. This program permits you to convert curves and points created in CAD program into coordinates in text file or you can do the opposite - convert text files into curves. It is especially suitable for curves described by hundreds of coordinates, e.g. airfoil contours of aircraft wings. Output filename is either out.txt or out.igs. -
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Xdvi is a program for displaying DVI files on the X window system. Xdvik is a variant with hyperlink support and other additions, deployed e.g. in the TeX Live distribution.
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bruread is a program to read and display NMR data in the Bruker XWIN-NMR format. The program has a command-line interface and a graphic display based on gnuplot. - Note that this is only an NMR spectrum *viewer*, not a full-fledged data evaluation suite
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cdfread is a program for people wirking with mass spectrometry datasets. cdfread implements the routines to read mass spectra and mass chromatograms from data files in netCDF ("Andi-MS") format. Centroid and profile data are supported.
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ebfformat
An Efficient Binary data Format
EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided. The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code... -
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SparthMP
SparthMP is an ANSI-C math library for Multi-Precision calculations
SparthMP is an ANSI-C math library for Multi-Precision calculations, i.e. beyond float/double domain. It supports regulated accuracy of calculations. For algorithm design with this library you should have an understanding of rounding errors in math. -
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qucs2EQ
Convert Qucs Prv1 data to Audacity EQ curve xml
Convert from Qucs Pr1.v dataset to Audacity equalization curve xml. Tested with Qucs Dataset 0.0.18 and Audacity 2.0.3 -
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pyCGNS
A Python package for CGNS
pyCGNS is now on github: https://pycgns.github.io/index.html https://github.com/pyCGNS/pyCGNS -
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brl2mml
A library to convert between braille and MathML
**NOTE**: This project has been moved to https://github.com/timothytylee/brl2mml brl2mml is a library that can perform conversion between braille and MathML. It currently supports UK Maths braille. -
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DemuxFS is a live filesystem to aid on the analysis of transport streams in digital TV systems such as the SBTVD (ISDB-T), DVB and ATSC.
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FieldTrip
The MATLAB software toolbox for MEG and EEG analysis
FieldTrip is the Matlab toolbox for EEG and MEG data. It includes algorithms for simple and advanced analysis, such as importing, preprocessing, time-frequency analysis, source reconstruction, statistical testing and connectivity analysis. -
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libsaxsdocument, libsaxsimage and saxsview; read, convert and view 1D and 2D-files related to Small Angle X-ray Scattering (SAXS).
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This is the reference library for ICS (Image Cytometry Standard), an open standard for writing images of any dimensionality and data type to file, together with associated information regarding the recording equipment or recorded subject.
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libznz with zindex
This is a fast version of libznz used in NIfTI C library
This library provides notable speed-up for seeking in large compressed NIfTI files. It is compatible with the libznz interface which is part of NIfTI C library to handle multidimensional (mostly MRI) images. Only the replacement of the currently available libznz library is necessary. To reach the expected speed-up the compressed NIfTI data has to be indexed with the included tool. To compile the binaries, the sources available in this project have to be replaced with the ones in... -
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RANGE: produce random genetic transcription networks in the NEMO language, which when compiled outputs models in Systems Biology Markup Language. Generate synthetic microarray data, or use NEMO alone to SBML-ize a network, or visualize it in cytoscape.
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trafalgar.map
Open Street Map (OSM) tools, OSM/XML parser, tag extractor
This is going to be a set of tools which is intended to be used with huge OSM files like the planet files in XML format. The parser reads directly from packed *.gz files and it is not needed to unpack the OSM/XML data files to the local disk. Now in 0.3.0: osm_tags: tag analyzer (like tag watch) osm_split: split osm file in single files for nodes, ways and relations and collect some meta information (will be used as input for other tools). osm_cut: create rectangular... -
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Open Source Implementations for 3D-Surface Characterisation Algorithms according to ISO 25178 (Geometric Product Specification) in verifiable pseudocode (MATLAB). Implementation of an XML-based file exchange format according to upcoming ISO 25178-72.
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Libnodave is a library that provides the necessary functions to connect to and exchange data with Siemens S7 300/400 PLCs (200 family and S5 family now also supported). Can now also be used under Win32.
