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Nokogiri (鋸) makes it easy and painless to work with XML and HTML from Ruby. It provides a sensible, easy-to-understand API for reading, writing, modifying, and querying documents. It is fast and standards-compliant by relying on native parsers like libxml2 (C) and xerces (Java). Be secure-by-default by treating all documents as untrusted by default. Be a thin-as-reasonable layer on top of the underlying parsers, and don't attempt to fix behavioral differences between the parsers. "Native...
A file format for exchanging computational models in systems biology
The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.
EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided.
The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code...
A generic hierarchical file format. BHM can be seen as the binary equivalent of XML. It allows flexible hierarchies of any type of data, in a platform-independent way. BHM however trades XML's readability for compactness and speed of processing.
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VTD-XML is the next generation XML parser/indexer/editor/slicer/assembler/xpath-engine that goes beyond DOM, SAX and PULL in performance, memory usage, and ease of use.
SmartSlog (Smart Space Ontology) is a software/application development kit (SDK or ADK) for programming Smart-M3 agents (Knowledge Processors, KPs) that consume/produce smart space content according with its high-level ontological representation. SmartSlog applies the code generation approach: given an OWL ontology description, the ontology programming library is produced. The latter provides API to access the smart space via a Smart-M3 Semantic Information Broker (SIB) and data structures...
Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files
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OGDL is a structured format for representing graphs of information, alternative to XML. Its grammar is very simple allowing for compact parsers. The text version is easily readable; the binary version is used for storage and interprocess communication.
Tpl makes it easy to serialize your C data using just a handful of API functions. The data is stored in its native binary form for maximum efficiency. C, Perl and XML supported. Data is portable across CPU types and OS's from Unix to Mac to Windows.
Water: a fast, secure, dynamic OO language and database. Water is an all-purpose language (and meta-language) that runs Web applications in the browser or server-side. Water is compatible with .NET, Java, and C on Windows, Linux and Mac OS X system.
DIET-PC (DIskless Embedded Technology Personal Computer) is a software kitset enabling IT professionals to build an open source GUI appliance based on commodity x86 (PC), PowerPC (Mac) or ARM (handheld) hardware, using an embedded Linux methodology.
COLLADA Refinery is a GUI-based application for creating content pipelines for 3D assets using modular components called conditioners. Contact a project admin to become a developer!
The tool putting HTML/XHTML documents into the Lotus Notes/Domino R5, R6 or R7 databases. The HTML code is aggregated in defined field of document, including files of the resources. Currently is only supported Polish language.
Platform-independent C-API library implementing the Record-JAR file format, with mappings to other languages/technologies, including C++, COM, D, .NET, Python, Ruby, and STL.
basE91 is an advanced method for encoding binary data as ASCII characters. It is similar to UUencode or base64, but is more efficient. The overhead produced by basE91 depends on the input data. It amounts at most to 23% and can range down to 14%.
NTW is a cross-platform client/server protocol and widget toolkit that allows efficient remote operation, even over slow networks. Its goal is to be able to serve hundreds of remote clients with a single inexpensive server.
LMY image codec and tools for small, 16-bit (or higher) displays on devices with limited resources. Image file size and quality rival GIF, PNG, and JPEG, but decompression is much less complex. Used commercially by Lower Mars. C/C++ and Java/j2ME include
Cross-programming-language object serialisation. The library uses a schema to write object networks to, and create object networks from, a file (eg XML). Written in Java with ports to C and C++ to follow. Features include file recovery and versioning.
A binary protocol, library, and utilities for serialization and manipulation of data. Designed to replace XML. Features: *Compact (not compressed) binary encoding. *Strongly-typed, using type definitions. *Platform independant