Search Results for "idle3-tools"
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Showing 54 open source projects for "idle3-tools"
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8 Monitoring Tools in One APM. Install in 5 Minutes.AppSignal works out of the box for Ruby, Elixir, Node.js, Python, and more. 30-day free trial, no credit card required.
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pandas
Fast, flexible and powerful Python data analysis toolkit
pandas is a Python data analysis library that provides high-performance, user friendly data structures and data analysis tools for the Python programming language. It enables you to carry out entire data analysis workflows in Python without having to switch to a more domain specific language. With pandas, performance, productivity and collaboration in doing data analysis in Python can significantly increase. pandas is continuously being developed to be a fundamental high-level building block for doing practical, real world data analysis in Python, as well as powerful and flexible open source data analysis/ manipulation tool for any language. -
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dlib
Toolkit for making machine learning and data analysis applications
Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real world problems. It is used in both industry and academia in a wide range of domains including robotics, embedded devices, mobile phones, and large high performance computing environments. Dlib's open source licensing allows you to use it in any application, free of charge. Good unit test coverage, the ratio of unit test lines of code to library lines of code is about 1 to 4. ... -
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scikit-learn
Machine learning in Python
scikit-learn is an open source Python module for machine learning built on NumPy, SciPy and matplotlib. It offers simple and efficient tools for predictive data analysis and is reusable in various contexts. -
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JavaParser
Java 1-17 Parser and Abstract Syntax Tree for Java
This project contains a set of libraries implementing a Java 1.0 - Java 17 Parser with advanced analysis functionalities. The project binaries are available in Maven Central. We strongly advise users to adopt Maven, Gradle or another build system for their projects. If you are not familiar with them we suggest taking a look at the maven quickstart projects. Since Version 3.5.10, the JavaParser project includes the JavaSymbolSolver. While JavaParser generates an Abstract Syntax Tree,... -
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XMLTV 1.4.0
Utilities to obtain, generate, and post-process TV listings data
XMLTV is a suite of utilities to obtain, generate, and post-process TV listings data in XMLTV format. It provides tools to gather television listings, process listings data, and help organize TV viewing. -
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POCO
Cross-platform C++ libraries for building network applications
The POCO C++ Libraries are powerful cross-platform C++ libraries for building network- and internet-based applications that run on desktop, server, mobile, IoT, and embedded systems. Whether building automation systems, industrial automation, IoT platforms, air traffic management systems, enterprise IT application and infrastructure management, security and network analytics, automotive infotainment and telematics, financial or healthcare, C++ developers have been trusting the POCO C++... -
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hctsa
Highly comparative time-series analysis
hctsa is a Matlab software package for running highly comparative time-series analysis. It extracts thousands of time-series features from a collection of univariate time series and includes a range of tools for visualizing and analyzing the resulting time-series feature matrix. -
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clusterProfiler
A universal enrichment tool for interpreting omics data
clusterProfiler is an R/Bioconductor package that provides a unified workflow for functional enrichment analysis to interpret high-throughput omics results. It supports both over-representation analysis and gene set enrichment analysis, letting you work with unranked gene lists or ranked statistics from differential pipelines. The package connects to multiple knowledge bases—such as Gene Ontology, KEGG, Reactome, Disease Ontology, MeSH and others—through a consistent interface so you can... -
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StarRocks
StarRocks is a next-gen sub-second MPP database for full analytics
...From streaming data to change data capture, StarRocks meets the data ingestion demands of real-time analytics. Scale storage and computing power horizontally and support tens of thousands of concurrent users. All of your BI tools work with StarRocks through standard SQL. StarRocks provides superior performance. It is also a unified OLAP covering most data analytics scenarios. -
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EEGLAB
EEGLAB is an open source signal processing environment
EEGLAB is an open source, MATLAB-based interactive environment for analyzing electrophysiological signals such as EEG and MEG. It incorporates powerful tools for data import, preprocessing, independent component analysis (ICA), time-frequency analysis, artifact rejection, and visualization—all within a GUI framework that also supports scripting and plugin extensions. EEGLAB is an open source signal processing environment for electrophysiological signals running on Matlab and Octave (command line only for Octave). ... -
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Elasticsearch
A Distributed RESTful Search Engine
Elasticsearch is a distributed, RESTful search and analytics engine that lets you store, search and analyze with ease at scale. It lets you perform and combine many types of searches; it scales seamlessly, and offers answers incredibly fast with search results you can rank based on a variety of factors. Elasticsearch can be used for a wide variety of use cases, from maps and metrics to site search and workplace search, and with all data types. -
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Datasette
An open source multi-tool for exploring and publishing data
...Datasette is aimed at data journalists, museum curators, archivists, local governments, scientists, researchers and anyone else who has data that they wish to share with the world. It is part of a wider ecosystem of tools and plugins dedicated to making working with structured data as productive as possible. Try a demo and explore 33,000 power plants around the world, then take a look at some other examples of Datasette in action. Then read how to get started with Datasette, subscribe to the monthly-ish newsletter and consider signing up for office hours for an in-person conversation about the project. -
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SageMaker Spark Container
Docker image used to run data processing workloads
...It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing. The SageMaker Spark Container is a Docker image used to run batch data processing workloads on Amazon SageMaker using the Apache Spark framework. The container images in this repository are used to build the pre-built container images that are used when running Spark jobs on Amazon SageMaker using the SageMaker Python SDK. ... -
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mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
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CT4AM
Tools for 3D image analysis of additively manufactured parts
...Instead, CT4AM is a collection of small and simple apps that have already been successfully used to solve various problems in materials science and process visualization. You can either execute these tools directly or use their source codes to develop your own application for toolpath analysis or correlation. -
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SafeUtils
110+ developer tools as native MacOS, Linux & Windows desktop apps.
Tools: https://safeutils.com/barcode-generator https://safeutils.com/color-picker https://safeutils.com/qr-code-generator https://safeutils.com/qr-code-scanner https://safeutils.com/word-counter https://safeutils.com/base-64-decoder https://safeutils.com/diff-checker https://safeutils.com/hex-to-ascii https://safeutils.com/json-formatter https://safeutils.com/lorem-ipsum-generator https://safeutils.com/random-generator https://safeutils.com/time-converter https://safeutils.com/xml-formatter https://safeutils.com/ascii-to-binary https://safeutils.com/ascii-to-hex https://safeutils.com/base-64-encoder https://safeutils.com/binary-to-ascii https://safeutils.com/case-converter https://safeutils.com/csv-to-json https://safeutils.com/decimal-to-ascii https://safeutils.com/html-formatter https://safeutils.com/html-preview https://safeutils.com/html-to-markdown https://safeutils.com/id-generator https://safeutils.com/json-to-csv https://safeutils.com/json-to-xml -
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AtomProbeLab
Matlab-based analysis of Atom Probe Data
A collection of scripts and functions for the analysis of atom probe tomography data. Currently, this includes: standard file operations, plotting mass spectra, mass spectra analysis and mass peak overlap solving. For more information see the Wiki: https://sourceforge.net/p/atomprobelab/wiki/Home/ Quick overview video: https://youtu.be/8rJHce7M5UU More in-depth video using the APT school demos live script: https://www.youtube.com/watch?v=cyrLHCzZwuw For details of the maximum... -
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Parallel and Distributed Process System
NOTICE OF CONSOLIDATION & PARTNERSHIP PENDING As of April 2026, the 20
...Academic users at partner institutions are currently performing validation; all other commercial inquiries must contact the author Computational Neuroscience: Large-scale neural population dynamics, brain-inspired computing architectures, and neuro-symbolic AI systems 🧬 Scientific Overview PDP-OmniSim is an advanced computational framework for simulating parallel and distributed processing systems, with cutting-edge applications in computational neuroscience, distributed computing, and complex systems modeling. The framework provides researchers with robust tools for large-scale simulations of networked systems and their emergent behaviors. 🎯 Key Scientific Contributions 🔬 Interdisciplinary Resear -
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Wooey
A Django app that creates automatic web UIs for Python scripts
...Originally two separate projects (Django-based djangui by Chris Mitchell and Flask-based Wooey by Martin Fitzpatrick) it has been merged to combine our efforts. Enable the easy wrapping of any program in simple python instead of having to use language specific to existing tools such as Galaxy. Enable fellow lab members with no command line experience to utilize python scripts. Autodocument workflows for data analysis (simple model saving). -
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MS-Helios
MS-Helios: A Circos wrapper to visualize multi-omic datasets
Advances in high-resolution mass spectrometry facilitate the identification of hundreds of metabolites, thousands of proteins and their post-translational modifications. This remarkable progress poses a challenge to data analysis and visualization, requiring methods to reduce dimensionality and represent the data in a compact way. To provide a more holistic view, we recently introduced circular proteome maps (CPMs). However, the CPM construction requires prior data transformation and... -
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PINCIS
PINCIS.pl is a Perl bioinf. script to analyze PICS data
PINCIS.pl (PIcs N-/C-terminal Inferred Substrates perl script) is a small, command line tool to designate and analyze PICS (Schilling et al., Nat. Protocols, 2011) data to gain the prime and non-prime site specificity of proteases. Thus, the script filters given peptide lists for library peptides (generated by the digestion protease in the proteomics workflow rather then the protease of interest) and prints out lists of inferred N- and C-terminal cleavage window extensions which can be... -
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Reproducible-research
A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.
In this tutorial, we describe a workflow to ensure long-term reproducibility of R-based data analyses. The workflow leverages established tools and practices from software engineering. It combines the benefits of various open-source software tools including R Markdown, Git, Make, and Docker, whose interplay ensures seamless integration of version management, dynamic report generation conforming to various journal styles, and full cross-platform and long-term computational reproducibility. ... -
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QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
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TSA_CRAFT
Automatic command line tool for TSA data analysis
DSF is a high-throughput platform of TSA assay to screen various conditions that affect protein stability. To facilitate TSA data analysis, we developed an automatic tool "TSA-CRAFT". TSA-CRAFT was developed by integrating PERL script and Gnuplot. PERL scripts manage the entire workflow and data processing procedures of TSA data analysis. On the other hand, Gnuplot takes over the curve fitting and result presentation works. All analysed results are coded in an html file that can be easily... -
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An introduction to Data Analysis in R
A guide for learning the basic tools on data anaylisis with R
An Introduction to Data Analysis in R [Book] A guide for learning the basic tools on data anaylisis: process, visualize and learn from your data using R programming. This repository holds the necessary data sets for the book "An introduction to Data Analysis in R", to be published by Springer series Use R!. The book can be purchased in XXX. The book is meant as an introductory guide to manipulate data sets in the Big Data paradigm.
