Open Source Linux Data Analytics Tools - Page 3
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Data Analytics Tools for Linux
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JSMN
Jsmn is a world fastest JSON parser/tokenizer
JSMN (pronounced "jasmine") is a minimalistic JSON parser in C. It's tailored for resource-constrained environments, making it ideal for embedded systems where efficiency and low memory footprint are paramount. -
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Kapacitor
Open source framework for processing, monitoring, and alerting
Open source framework for processing, monitoring, and alerting on time series data. Kapacitor is a real-time data processing engine for monitoring and alerting, specifically designed to work with time-series data from InfluxDB. -
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PivotTable.js
Open-source Javascript Pivot Table
PivotTable.js is a powerful JS library (originally CoffeeScript) that brings Excel-style pivot tables to the browser. Built atop jQuery and jQueryUI, it allows users to drag and drop fields into rows, columns, and aggregators to slice and summarize datasets. It also integrates with Python and R via modules like pivottablejs, making it versatile for data analysis across platforms. -
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Rust Data Analysis
Rust for data analysis encyclopedia (WIP)
Welcome to the Rust Data Analysis repository! This collection of Jupyter notebooks provides a comprehensive exploration of data analysis using Rust. Powered by a Rust kernel, these notebooks allow you to dive deep into the realm of data analysis, leveraging the capabilities of the Rust programming language. With the help of various Rust libraries, such as ndarray, plotters, and more, you'll be able to extract valuable insights from different datasets with ease. -
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SageMaker Spark Container
Docker image used to run data processing workloads
Apache Spark™ is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing. The SageMaker Spark Container is a Docker image used to run batch data processing workloads on Amazon SageMaker using the Apache Spark framework. The container images in this repository are used to build the pre-built container images that are used when running Spark jobs on Amazon SageMaker using the SageMaker Python SDK. The pre-built images are available in the Amazon Elastic Container Registry (Amazon ECR), and this repository serves as a reference for those wishing to build their own customized Spark containers for use in Amazon SageMaker. -
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Symfony PropertyInfo
Extracts information about PHP class' properties using metadata
Symfony PropertyInfo is a component that extracts information about the properties of PHP classes, such as their names, types, visibility, and documentation. It is particularly useful in scenarios like serialization, form generation, and validation, where understanding the structure of an object is essential. PropertyInfo can fetch data from PHPDoc annotations, reflection, and type hints, offering flexible integration with Symfony and other systems. -
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TensorBase
TensorBase is a new big data warehousing with modern efforts
TensorBase hopes the open source not become a copy game. TensorBase has a clear-cut opposition to fork communities, repeat wheels, or hack traffic for so-called reputations (like Github stars). After thoughts, we decided to temporarily leave the general data warehousing field. For people who want to learn how a database system can be built up, or how to apply modern Rust to the high-performance field, or embed a lightweight data analysis system into your own big one. You can still try, ask or contribute to TensorBase. The committers are still around the community. We will help you in all kinds of interesting things pursued in the project by us and maybe you. We still maintain the project to look forward to meeting more database geniuses in this world, although no new feature will be added in the near future. -
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Vince
Self Hosted Alternative To Google Analytics
vince is a versatile tool that assists in data analysis and visualization, providing users with insights through interactive charts and graphs. -
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clusterProfiler
A universal enrichment tool for interpreting omics data
clusterProfiler is an R/Bioconductor package that provides a unified workflow for functional enrichment analysis to interpret high-throughput omics results. It supports both over-representation analysis and gene set enrichment analysis, letting you work with unranked gene lists or ranked statistics from differential pipelines. The package connects to multiple knowledge bases—such as Gene Ontology, KEGG, Reactome, Disease Ontology, MeSH and others—through a consistent interface so you can query different biological lenses without rewriting code. It is designed for breadth, covering coding and non-coding features and thousands of organisms by leveraging continuously updated annotations. Results are returned in tidy, manipulation-friendly structures and pair naturally with rich visualization functions (via companion tooling) to summarize pathways, terms, and gene–set relationships. -
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relax
Molecular dynamics by NMR data analysis
The software package 'relax' is designed for the study of molecular dynamics through the analysis of experimental NMR data. Organic molecules, proteins, RNA, DNA, sugars, and other biomolecules are all supported. It supports exponential curve fitting for the calculation of the R1 and R2 relaxation rates, calculation of the NOE, reduced spectral density mapping, the Lipari and Szabo model-free analysis, study of domain motions via the N-state model and frame order dynamics theories using anisotropic NMR parameters such as RDCs and PCSs, the investigation of stereochemistry in dynamic ensembles, and the analysis of relaxation dispersion data. -
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ProteoWizard development moved to GitHub in 2018. The ProteoWizard Library is a set of software libraries and tools for rapid development of proteomics data analysis software. The libraries are cross-platform and built from the ground up using modern C++ techniques.
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Parallel Colt is a multithreaded version of Colt - a library for high performance scientific computing in Java. It contains efficient algorithms for data analysis, linear algebra, multi-dimensional arrays, Fourier transforms, statistics and histogramming
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Kst is the fastest real-time large-dataset viewing and plotting tool available and has basic data analysis functionality. Kst contains many powerful built-in features and is expandable with plugins and extensions.
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OpenUnderwriter (Insurance Distribution)
Feature rich insurance quote & buy system for underwriters and brokers
OpenUnderwriter is an open source software house specialising in the development of IT solutions for the insurance market. Specialists in the areas of eBusiness and component based development, the team has developed technology for a number of major insurance companies. The OpenUnderwriter platform has been collaboratively developed by some of the best technical brains in the Insurance Industry and offers a viable alternative to traditional solutions. To date, OpenUnderwriter has been downloaded over 26,000 times in 30 countries. Our goal is simple, we are focused on enabling insurers and brokers to perform more effectively by providing a powerful, adaptable and robust open source insurance software toolset that removes the traditional barriers associated with insurance software adoption, including high cost of ownership, slow time to market and restrictive long term contracts. -
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PalOOCa OpenOffice Extension for Palo
palo olap open office calc plugin for data analysis
The PalOOCa Project offers a fast, flexible and intuitive Office-based Business Intelligence solution based on Jedox. It provides an extension for OpenOffice.org Calc which allows both, read and write, access to data from within the Jedox OLAP Server via Calc. If used together with the Open Source Jedox/Palo OLAP Server it completes the Open Source MOLAP-Stack for Business Intelligence. Additionally to Jedox OLAP it is also (read-only) compatible to (almost) all OLAP servers supporting XMLA. Intended audiences are: - scientific research & teaching - financial analysis & controlling Consult the FAQ in the Wiki. -
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TeachingDemos
Bioinformatics related demos and tutorials using the R programming lan
Bioinformatics related demos and tutorials using the R programming language for large biological data. Licence: Creative Commons Attribution-NonCommercial 4.0 International License -
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iMir
Integrated pipeline for HT miRNA-Seq data analysis
Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular pipeline, called iMir, integrating multiple open source modules and resource in an automated workflow, devising different statistical approaches to analyze data rigorously. iMir comprises also a Graphical User Interface (GUI), so that the pipeline is particularly suited for biologist and early stage bioinformaticians and produces both graphics and text outputs. -
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xSonify
Java-based sonification data analysis
xSonify is a Java-based sonification data analysis prototype for displaying science data as sounds, with an emphasis on supporting visually-impaired researchers. Alternatives include Sonification Sandbox <http://sonify.psych.gatech.edu/research/>, MathTrax and Earth Plus <http://prime.jsc.nasa.gov/>, Sonifyer <http://www.sonifyer.org> and SoniPy <http://sourceforge.net/projects/sonipy/>. More at the main forum for sonification, ICAD <http://icad.org> -
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xrayutilities
a package with useful scripts for X-ray diffraction physicists
xrayutilities is a python package used to analyze x-ray diffraction data. It can support with performing diffraction experiments and used for common steps in the data analysis. It can read experimental data from several data formats (spec, edf, xrdml, ...); convert them to reciprocal space for arbitrary goniometer geometries and different detector systems (point, linear as well as area detectors); for further processing the data can be gridded (transformed to a regular grid). More detailed description as well as documentation can be found at webpage http://xrayutilities.sourceforge.io/. Downloads for windows can be found on http://pypi.python.org/pypi/xrayutilities Development is performed on github: https://github.com/dkriegner/xrayutilities -
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Graph Plotter
GP is a tool to analyse numerical data
GP is aimed to be simple and fast tool to analyse numerical data. It does not claim to replace all other plotters. -
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Toolbox for handling X-ray transmission image data collected using the Xradia TXM system. We are constantly updating the code to implement other file formats as well - suggestions are welcome. Main articles: -) TXM-Wizard: a program for advanced data collection and evaluation in full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 19, 281-287. (2012) http://scripts.iucr.org/cgi-bin/paper_yard?hf5192 -) 3D elemental sensitive imaging using transmission X-ray microscopy, Analytical and Bioanalytical Chemistry, Volume 404, Issue 5, pp 1297-1301 (2012) http://link.springer.com/article/10.1007%2Fs00216-012-5818-9 -) Three-dimensional imaging of chemical phase transformations at the nanoscale with full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 18, 773-781. (2011) http://scripts.iucr.org/cgi-bin/paper?ie5055
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EChem++ is a software system based on an object oriented approach to electrochemical experimentation, simulation, and data analysis. Currently, development emphasis lies on the modelling and simulation as well as the analysis modules.
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The repository has been moved to: https://github.com/wojdyr/fityk. Fityk is nonlinear curve-fitting and data analysis software. It is specialized in fitting peaks (bell-shaped functions like Gaussian, Loretzian, Pearson7, Voigt) to experimental data.
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This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and hybrid systems). It supports symbolic math, optimization, continuation, data analysis, biological apps...
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EyeMap is a visualization and analysis tool for text reading eye movement data. It can process Unicode, proportion/non-proportion and spaced/unspaced reading materials, which supports various languages and experiment methods.
