Showing 523 open source projects for "algorithm"

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  • 1

    RElt

    calculates overlap, kinetic integrals for numerical atomic orbitals.

    The efficient algorithm calculating the overlap and the kinetic integrals for the numerical atomic orbitals is implemented. The described algorithm exploits the properties of the prolate spheroidal coordinates. The overlap and the kinetic integrals in R^3 are reduced to the integrals over the rectangular domain in R^2, what substantially reduces the complexity of the problem. We prove that the integrand over the rectangular domain is continuous and does not have any slope singularities...
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  • 2
    faif

    faif

    C++ header only library with AI and bioinformatics algorithms

    C++ header only library, small and fast; Naive Bayesian Classifier, Decision Tree Classifier (ID3), DNA/RNA nucleotide second structure predictor, timeseries management, timeseries prediction, generic Evolutionary Algorithm, generic Hill Climbing algorithm and others.
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  • 3

    GenCodeGenerator

    C++ class to generate biologically plausible genetic codes

    ... genetic codes, with the reqirement of block structure, and, optionally, with the assumption of stereochemical or biosynthetic models (to impose the assumption of the adaptive model, simply filter the codes using the error_cost() function). See Appendix in Makukov & shCherbak (2017) for the description of the algorithm. The code requires Qt 5. To compile the provided example, run 'qmake' to produce the Makefile, and then run 'make' to compile the executable file. License: Public Domain.
    Downloads: 0 This Week
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  • 4

    A star

    it is an implementation of A* algorithm with examples of its usage.

    A start (A*) is the algorithm for searching the shortest path in the weighted graphs. My implementation is provided with various interesting applications, i.e. 15 puzzle. This project is related to my other projects located at sourceforge as well: https://sourceforge.net/projects/path-finder-qt/ https://sourceforge.net/projects/shortest-path-graph-a-star/ For detail of A* algorithm see wiki page: https://en.wikipedia.org/wiki/A*_search_algorithm
    Downloads: 0 This Week
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  • 5
    IPAS for protein sequences

    IPAS for protein sequences

    multiple alignment algorithm for protein sequences

    IPAS is a new and practial protein multiple sequence alignment algorithm based on iterative progresive alignment algorithm Assessed on BAliBASE 3.0, PREFAB 4.0, SABMARK 1.65, and OXBENCH, MSAProbs achieves the statistically highest alignment accuracy, compared to ClustalW 2.0.10, MAFFT 6.717( using L-INS-i with --maxiterate = 1000), MUSCLE 3.8.31, ProbCons 1.12, and Probalign 1.3.
    Downloads: 0 This Week
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  • 6
    Snappy Driver Installer
    Snappy Driver Installer is an application for installing/updating drivers on PCs running Microsoft Windows using driverpacks or included folders with drivers. It can be used to install drivers on newly assembled PCs at places where Internet isn't available. Users can also use the software to keep their drivers up to date.
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    Downloads: 303 This Week
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  • 7
    MCU Media Server

    MCU Media Server

    SIP Video Multiconference Media Server with WebRTC support.

    REPOSITORY MOVED TO GITHUB!! https://github.com/medooze/media-server Video Multiconference Media Server with WebRTC support. Provide Multiconference and video broadcasting services to any SIP service. Supports VP8, H264, MP4V-ES, H263 and H263P, continuous presence, RTMP flash broadcasting, adhoc conferences, load balancing and administrative WEB interface. JSR309 driver implementation under development. .
    Downloads: 0 This Week
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  • 8

    MSU's Sparse Fourier Repository

    The Home of DMSFT, AAFFT, GFFT, and MSFFT.

    ... efficiently. It is much slower than it should be. 3.) GFFT, implemented by Ben Segal and Mark Iwen. This code is less easy to use, and also not terribly efficient. But, the *algorithm* itself is significantly simpler and has "essentially no parameters". 4.) MSFFT, implemented by David Lawlor and Bosu Choi. This code is fast, but is not terribly easy to use. The algorithm is robust to some noise, but requires a lot of parameter tuning. Enjoy at your own risk :), Mark Iwen
    Downloads: 1 This Week
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  • 9

    Random Bits Forest

    RBF: a Strong Classifier/Regressor for Big Data

    We present a classification and regression algorithm called Random Bits Forest (RBF). RBF integrates neural network (for depth), boosting (for wideness) and random forest (for accuracy). It first generates and selects ~10,000 small three-layer threshold random neural networks as basis by gradient boosting scheme. These binary basis are then feed into a modified random forest algorithm to obtain predictions. In conclusion, RBF is a novel framework that performs strongly especially on data...
    Downloads: 0 This Week
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  • 10

    RAtom

    solves nonlinear Kohn-Sham equation for the neutral atom.

    RAtom solves nonlinear Kohn-Sham equation for the neutral atom. The adaptive algorithm based on finite element method (FEM) is implemented. Discretization of the differential eigenvalue problem is done by finite element method with Lobatto polynomials as a basis functions. High order Gauss quadratures are applied in order to obtain the total energy of atom with absolut accuracy of 1E-6 hartree. Disctretization leads to generalized eigenvalue problem, which is solved by procedures from...
    Downloads: 0 This Week
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  • 11

    RSchr-5

    Solves one-electron Schrödinger equation, with SLEPc and PETSc

    RSchr-5 calculates the smallest eigenvalues of the one-electron Schrödinger equation. The solved problem is defined on the finite domain, which is a box. The problem is solved with the zero Dirichlet boundary conditions. The implemented algorithm uses Finite Element Method with B-splines as basis functions. Disctretization leads to generalized eigenvalue problem. Program RSchr-5 solves the generalized eigenvalue problem by algorithms implemented in SLEPc amd PETSc libraries. It uses...
    Downloads: 0 This Week
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  • 12
    nunn

    nunn

    This is an implementation of a machine learning library in C++17

    nunn is a collection of ML algorithms and related examples written in modern C++17.
    Downloads: 0 This Week
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  • 13
    NiceShaper - Dynamic Traffic Shaper

    NiceShaper - Dynamic Traffic Shaper

    NiceShaper provides dynamic traffic shaping for Linux router

    NiceShaper is the program developed for Linux router environment. It works in user space on top of standard Linux QOS implementation and iptables. By default, a proven HTB algorithm is used for the root, inner, and leaf classes, SFQ packets scheduling algorithm is the default queuing discipline (qdisc) contained within each of leaf classes, U32 and FW are used as the packets classifiers. NiceShaper provides dynamic traffic shaping approach which is more effective than traditional shaping...
    Downloads: 0 This Week
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  • 14

    cupSODA

    Deterministic simulator of mass-action based models

    ... kinetics, and then exploiting the numerical integration algorithm, LSODA
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  • 15
    An open source optical flow algorithm framework for scientists and engineers alike.
    Downloads: 3 This Week
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  • 16

    Mortgage-Calculator

    A console command based application for calculating mortgage paybacks

    This command-line program written in C++ is a highly accurate calculator used to calculate monthly, yearly and full term mortgage repayments at a fixed interest rate. The program rounds up to the nearest whole pound and uses the same precise algorithm as other mortgage calculators. The program is fast, efficient and you can know your exact mortgage repayments in just 30 seconds!* *Additional fees not calculated - Harry Groom
    Downloads: 0 This Week
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  • 17
    MicroGP

    MicroGP

    A multi-purpose extensible self-adaptive evolutionary algorithm

    MicroGP (µGP, ugp) is a versatile optimizer able to outperform both human experts and conventional heuristics in finding the optimal solution of hard problems. It is an evolutionary algorithm since it mimics some principles of the Neo-Darwinian paradigm. ⚠️ A new version is available on https://github.com/squillero/microgp4
    Downloads: 0 This Week
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  • 18
    Community Detection Modularity Suite

    Community Detection Modularity Suite

    Suite of community detection algorithms based on Modularity

    - MixtureModel_v1r1: overlapping community algorithm [3], which includes novel partition density and fuzzy modularity metrics. - OpenMP versions of algorithms in [1] are available to download. - Main suite containing three community detection algorithms based on the Modularity measure containing: Geodesic and Random Walk edge Betweenness [1] and Spectral Modularity [2]. Collaborator: Theologos Kotsos. [1] M. Newman & M. Girvan, Physical Review, E 69 (026113), 2004. [2] M. Newman...
    Downloads: 0 This Week
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  • 19
    Attitude Estimator

    Attitude Estimator

    A C++ implementation of a nonlinear 3D IMU fusion algorithm.

    Attitude Estimator is a generic platform-independent C++ library that implements an IMU sensor fusion algorithm. Up to 3-axis gyroscope, accelerometer and magnetometer data can be processed into a full 3D quaternion orientation estimate, with the use of a nonlinear Passive Complementary Filter. The library is targeted at robotic applications, but is by no means limited to this. Features of the estimator include gyro bias estimation, transient quick learning, multiple estimation algorithms...
    Downloads: 0 This Week
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  • 20

    E-Reader

    Extreem Reader for Cosmological simulation data P-Gadet2 and ART codes

    Extreem Reader for Cosmological simulation data P-Gadet2 and ART codes.It conserves memory by using memory mapped files. Contains some basic analysis tools such a KD-Tree, Minimum Spanning Tree, and rendering module using PMViewer algorithm.
    Downloads: 0 This Week
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  • 21
    Easy Par2 for KDE
    ekpar2 (Easy Par2 for KDE) is a tool to create par2 recovery sets for one or more source files, verify and repair these source files. It has an easy to use gui for KDE (aimed to look and feel like the windows tool QuickPar). Par2 (or Parchive) is a set of recovery files that holds error correction information for one or more source files using the Reed Solomon algorithm (see parchive on SourceForge).
    Downloads: 7 This Week
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  • 22
    This code uses a technique originally developed for facial recognition to describe shear stress distributions in open channel flow. In this approach, a synthetic database of images representing normalized shear stress distributions is formed from the training data set using recurrence plot analysis. A face recognition algorithm is then employed to synthesize the recurrence plots and transform the original database into short-dimension vectors containing similarity weights proportional...
    Downloads: 0 This Week
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  • 23

    MULTOVL

    Multiple overlaps of genomic regions

    The MULTOVL suite of programs finds multiple overlaps among genomic regions. The MULTOVL algorithm can detect several kinds of region overlaps. In addition to the N-fold overlaps you can detect solitary regions which are the input regions that do not overlap with any other region in the input data set, and union overlaps that is the union of the input regions that overlap at least once somewhere. IMPORTANT NOTICE: MULTOVL has been migrated to BitBucket. Please refer to the MULTOVL website...
    Downloads: 0 This Week
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  • 24

    erne

    ERNE - Extended Randomized Numerical alignEr

    We present ERNE (Extended Randomized Numerical alignEr), a short string alignment package whose goal is to provide an all-inclusive set of tools to handle short (NGS-like) reads. ERNE comprises ERNE-FILTER (read trimming and continamination filtering), ERNE-MAP (core alignment tool/algorithm), ERNE-BS5 (bisulfite treated reads aligner), and ERNE-PMAP/ERNE-PBS5 (distributed versions of the aligners),
    Downloads: 3 This Week
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  • 25
    Graphplan Implementations
    This project consists of various implementations of the Graphplan algorithm. At the moment we have two implementations of Graphplan: * Emplan - A C++ implementation for Linux, Windows and MacOS X * JavaGP - A Java implementation
    Downloads: 1 This Week
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