Search Results for "transcript"
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Showing 2 open source projects for "transcript"
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PRADA
PRADA : Pipeline for RNA-Sequencing Data Analysis
...guess-ft: Supervised search for fusion transcripts. guess-if: Supervised search for intragenic fusions. homology: Calculates homology between given two genes. frame: Predicts functional consequence of fusion transcript -
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BriPy
A BRIC-seq data analysis package written in Python.
...It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). -Prerequisites To use BriPy package, you will need Python and the following extension packages. Python2.7 or higher NumPy SciPy Matplotlib
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