Showing 7 open source projects for "bam-readcount"

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  • Top-Rated Free CRM Software Icon
    Top-Rated Free CRM Software

    216,000+ customers in over 135 countries grow their businesses with HubSpot

    HubSpot is an AI-powered customer platform with all the software, integrations, and resources you need to connect your marketing, sales, and customer service. HubSpot's connected platform enables you to grow your business faster by focusing on what matters most: your customers.
  • SKUDONET Open Source Load Balancer Icon
    SKUDONET Open Source Load Balancer

    Take advantage of Open Source Load Balancer to elevate your business security and IT infrastructure with a custom ADC Solution.

    SKUDONET ADC, operates at the application layer, efficiently distributing network load and application load across multiple servers. This not only enhances the performance of your application but also ensures that your web servers can handle more traffic seamlessly.
  • 1
    Pandora FMS: Flexible Monitoring System

    Pandora FMS: Flexible Monitoring System

    Open Source Monitoring System for performance and availability.

    Pandora FMS is an enterprise-ready monitoring solution that provides unparalleled flexibility for IT to address both immediate and unforeseen operational issues, including infrastructure and IT processes. It uniquely enables business and IT to adapt to changing needs through a flexible and rapid approach to IT and business deployment. Pandora FMS consolidates all the needs of modern monitoring (ITOM, APM, BAM) and provides status and performance metrics from different operating systems, cloud...
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    Downloads: 2,972 This Week
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  • 2
    jChIP

    jChIP

    Graphical environment for exploratory ChIP­Seq data analysis

    jChIP is a GUI-based Java application for ChIP-Seq data analysis. It was created to build binding profiles between proteins and loci in the genome. In addition it computes statistics of the number of loci/positions containing specified amount of tags. jChIP is able to load data in several common formats (SAM, BAM, WIG, BED, Bowtie) and download loci definitions directly from the Ensembl database. http://www.biomedcentral.com/1756-0500/7/676
    Downloads: 0 This Week
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  • 3

    PRADA

    PRADA : Pipeline for RNA-Sequencing Data Analysis

    ... from RNAseq data: preprocess: Generates aligned and recalibrated BAM files. expression: Generates gene expression (RPKM) and quality metrics. fusion: Identifies candidate gene fusions. guess-ft: Supervised search for fusion transcripts. guess-if: Supervised search for intragenic fusions. homology: Calculates homology between given two genes. frame: Predicts functional consequence of fusion transcript
    Downloads: 0 This Week
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  • 4

    BriPy

    A BRIC-seq data analysis package written in Python.

    ... analysis. -What is BriPy? BriPy package is a BRIC-seq data analysis tool written in Python. It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). -Prerequisites To use BriPy package, you will need Python and the following extension packages. Python2.7 or higher NumPy SciPy Matplotlib
    Downloads: 0 This Week
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  • RMM Software | Remote Monitoring Platform and Tools Icon
    RMM Software | Remote Monitoring Platform and Tools

    Best-in-class automation, scalability, and single-pane IT management.

    Don’t settle when it comes to managing your clients’ IT infrastructure. Exceed their expectations with ConnectWise RMM, our MSP RMM software that provides proactive tools and NOC services—regardless of device environment. With the number of new vulnerabilities rising each year, smart patching procedures have never been more important. We automatically test and deploy patches when they are viable and restrict patches that are harmful. Get better protection for clients while you spend less time managing endpoints and more time growing your business. It’s tough to locate, afford, and retain quality talent. In fact, 81% of IT leaders say it’s hard to find the recruits they need. Add ConnectWise RMM, NOC services and get the expertise and problem resolution you need to become the advisor your clients demand—without adding headcount.
  • 5
    TimeSheet

    TimeSheet

    TimeSheet is a simple software for management activities

    TimeSheet is a simple software for management activities. This software structure projects work orders (= clients) and activities (eg design, development, etc.) and allows you to track time to work on.
    Downloads: 1 This Week
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  • 6
    samscope

    samscope

    A lightweight OpenGL SAM/BAM viewer

    A lightweight OpenGL based interactive SAM/BAM viewer. Quickly and easily generate aggregate statistics from SAM/BAM files like coverage, polarity, and minor allele frequencies, then scroll and explore freely with a simple mouse based interface. Multiple windows can be synchronized for careful comparison across multiple experiments.
    Downloads: 0 This Week
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  • 7
    Business Activity Monitoring based open source product
    Downloads: 0 This Week
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