Showing 172 open source projects for "python tool"

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  • 1
    MCNPydE

    MCNPydE

    MCNP data extraction and display software library

    MCNPydE is a Python library for extracting data from MCNP output file. It requires Python, Matplotlib and Numpy. It is a data reduction tool for MCNP output for ease of results analysis and viewing.
    Downloads: 3 This Week
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  • 2
    NCVTK: A VTK-based tool to visualize data stored in the NetCDF file format.
    Downloads: 0 This Week
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  • 3
    pybag

    pybag

    Crossplatform files synchronization and backup portable tool.

    PYBAG implements a portable bag and is intended for fast synchronization and backup. It lets you use a portable digital storage device to carry your electronic documents similar to the way you can use a bag to carry paper documents. You can synchronize the bag with your original files easily. If a synchronization conflict occurs, it will be reported. You can specify rules for automatic conflict resolution. With PYBAG, you can backup files and synchronize any changes made to the...
    Downloads: 0 This Week
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  • 4
    LaueTools

    LaueTools

    open source python packages for X-ray MicroLaue Diffraction analysis

    LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools
    Downloads: 1 This Week
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  • 5
    CloverDX

    CloverDX

    Design, automate, operate and publish data pipelines at scale

    Please, visit www.cloverdx.com for latest product versions. Data integration platform; can be used to transform/map/manipulate data in batch and near-realtime modes. Suppors various input/output formats (CSV,FIXLEN,Excel,XML,JSON,Parquet, Avro,EDI/X12,HL7,COBOL,LOTUS, etc.). Connects to RDBMS/JMS/Kafka/SOAP/Rest/LDAP/S3/HTTP/FTP/ZIP/TAR. CloverDX offers 100+ specialized components which can be further extended by creation of "macros" - subgraphs - and libraries, shareable with 3rd...
    Downloads: 2 This Week
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  • 6

    paralline

    Big Data tool

    Paralline executes a python function (or lambda function) or a script over each line of huge text files, in parallel processes and aggregates the result to a list.
    Downloads: 0 This Week
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  • 7
    Clustergrammer

    Clustergrammer

    An interactive heatmap visualization built using D3.js

    Clustergrammer is a visualization library built using D3.js that enables intuitive interaction with high-dimensional data. Clustergrammer was built with biological data in mind. Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end (Clustergrammer-PY) is built using Python. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several biology-specific features (e.g. enrichment analysis, see Biology-Specific Features) to facilitate the exploration of gene-level biological data.
    Downloads: 0 This Week
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  • 8
    A quantitative finance C++ library for modeling, pricing, trading, and risk management in real-life. A cross-platform free/open-source tool for derivatives and financial engineering.
    Downloads: 9 This Week
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  • 9
    Cygwin Ports

    Cygwin Ports

    Repository of desktops and programs for the Cygwin platform

    A large repository of open-source programs built for Cygwin, including X11 desktops, language interpreters, multimedia frameworks, cross-compiler toolchains, and much more. Also hosted here is the cygport tool for building Cygwin packages. cygport releases and the Ports Git repositories are hosted here; Ports packages are available from the website.
    Downloads: 0 This Week
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  • 10
    BiBler

    BiBler

    Tool to manage and manipulate BibTeX entries

    BiBler is a software for managing references to scientific articles using BibTeX. BiBler runs with a windows GUI or can be used as a Python library
    Downloads: 0 This Week
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  • 11
    colorview2d

    colorview2d

    Extendible 2D color plotting tool.

    Visualize and analyze 3D data files using 2D colorplots. Inspired by spyview. Written in python.
    Downloads: 0 This Week
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  • 12
    PortOpt

    PortOpt

    A portfolio-optimizer using Markowitz(1952) mean-variance model

    PortOpt [Portfolio Optimizer] is a C++ program (with Python binding) implementing the Markowitz(1952) mean-variance model with agent's linear indifference curves toward risk in order to find the optimal assets portfolio under risk. You have to provide PortOpt (in text files or - if you use the api - using your own code) the variance/covariance matrix of the assets, their average returns and the agent risk preference.
    Downloads: 0 This Week
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  • 13
    MaeBlok

    MaeBlok

    Rapid web development tool for business applications

    You assemble *blocks* in your django template, with each block wired to a tastypie resource, which in turn is mapped to a django model. Each *block* will reside in a dijit ContentPane which you must define in your template. You have a choice of 2 layouts for each *block*, Form or Grid based. Form displays a single record in either a 1, 2 or 3 column layout while Grid displays many rows in a spreadsheet like grid. You can perform edits in place on fields in both layouts. You can...
    Downloads: 0 This Week
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  • 14
    MSCViewer

    MSCViewer

    A tool for visualization and analysis of logs as sequence diagrams

    ...MSCViewer features integration with a Python interpreter which allows writing Python scripts interacting with the model. This powerful feature can be used to automate validatation of distributed control flows, integrate with graphing infrastructure, etc.
    Downloads: 0 This Week
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  • 15
    QuickNXS

    QuickNXS

    Polarized ToF reflectivity raw data analysis tool

    Data evaluation tool for the magnetism reflectometer at the spallation neutron source (BL-4A@SNS). Reads raw nexus files (HDF5) of histogrammed or event mode data to create reflectivity curves and 2D Q-maps.
    Downloads: 0 This Week
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  • 16
    MicrobeGPS

    MicrobeGPS

    The Explorative Taxonomic Profiling Tool for Metagenomic Data

    MicrobeGPS is a bioinformatics tool for the analysis of metagenomic sequencing data. The goal is to profile the composition of metagenomic communities as accurately as possible and present the results to the user in a convenient manner. One main focus is reliability: the tool calculates quality metrics for the estimated candidates and allows the user to identify false candidates easily.
    Downloads: 0 This Week
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  • 17
    ADOMA
    ADOMA stands for: Alternative Display Of Multiple Alignment. ADOMA can create four different displays of a multiple sequence alignment: a ClustalW alignment in HTML format, a simplified ClustalW alignment in HTML and/or txt format and a colored ClustalW alignment in HTML format. For examples of these outputfiles check the screenshots. ADOMA uses ClustalW to create the multiple alignment from DNA or protein sequences and displays them slightly different than the normal output of ClustalW....
    Downloads: 0 This Week
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  • 18
    MicroView
    MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
    Downloads: 8 This Week
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  • 19
    Optimal BPM

    Optimal BPM

    The beat of your business

    [See the files section for installation instructions] Optimal BPM™ is a project that aims to create an easy-to-use Business Process Management system (BPM) and tools. So far, only the tools, and only a data replication tool, Optimal Sync, has been released (available from the "files" page). But more is coming. It incorporates many different open source projects that relates to interoperability, transformation, context and process control. It has no business engine, instead it generates Python code and leaves the engine mechanics to its scripting engine. ...
    Downloads: 0 This Week
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  • 20
    Pathomx

    Pathomx

    Workflow-based data analysis built on IPython

    Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.
    Downloads: 0 This Week
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  • 21
    NanoCap

    NanoCap

    Carbon Fullerene and Capped Nanotube Generator

    NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code.
    Downloads: 3 This Week
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  • 22
    COV2HTML

    COV2HTML

    A visualization and analysis tool of Bacterial NGS data for Biologists

    COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS...
    Downloads: 0 This Week
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  • 23
    FlightFeather's goal is "social networking for everyone". This means that anyone should have a chance to run a popular social networking site -- on minimal hardware, and without wasting bandwidth.
    Downloads: 0 This Week
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  • 24

    BriPy

    A BRIC-seq data analysis package written in Python.

    ...It employs metabolic labeling by BrU of newly synthesized RNAs to chase chronological decreases of BrU-labeled RNA (Pulse-chase labeling), followed by immunoprecipitation with antibody for BrU, construction of cRNA library for High-throughput sequencing and computational data analysis. -What is BriPy? BriPy package is a BRIC-seq data analysis tool written in Python. It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). -Prerequisites To use BriPy package, you will need Python and the following extension packages. ...
    Downloads: 0 This Week
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  • 25

    LIstFOrmatCONverter

    A tool to convert an exported text file from one format to another.

    Sometimes an upgraded application changes data formats which can break compatibility with previous versions. If import/export text files are of the following format: "descript1","descript2","descript3" "data1","data2","data3" "data1","data2","data3" then this program can rearrange the data of large exported files in order to be imported into another version or application with little effort.
    Downloads: 0 This Week
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